Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / OpenMS/THIRDPARTY issues and pull requests

#110 - Update percolator to 3.7 on everything but windows x32

Pull Request - State: open - Opened by poshul 8 days ago

#109 - Updating Sage Binaries

Pull Request - State: closed - Opened by JohannesvKL 2 months ago - 2 comments
Labels: documentation, Review effort [1-5]: 1

#108 - update to ThermoRawFileParser1.4.4

Pull Request - State: closed - Opened by timosachsenberg 6 months ago - 3 comments

#107 - remove SIRIUS

Pull Request - State: closed - Opened by axelwalter 7 months ago

#106 - Comet executable version differs in quay container and repo

Issue - State: closed - Opened by jonasscheid 8 months ago - 5 comments

#105 - update sage to 0.14.4

Pull Request - State: closed - Opened by timosachsenberg about 1 year ago

#104 - Update Sage to v0.14.1

Issue - State: closed - Opened by lazear about 1 year ago - 3 comments

#103 - Delete Fido directory

Pull Request - State: closed - Opened by timosachsenberg about 1 year ago

#102 - Update sage search engine to v0.13.4

Pull Request - State: closed - Opened by matteopilz over 1 year ago

#101 - Update sage search engine

Issue - State: closed - Opened by timosachsenberg over 1 year ago - 2 comments

#100 - create executable mokapot packages for linux, windows, mac

Issue - State: open - Opened by timosachsenberg over 1 year ago - 6 comments

#99 - Add files via upload

Pull Request - State: open - Opened by timosachsenberg over 1 year ago - 7 comments

#98 - Update comet executable to 2023 version

Pull Request - State: closed - Opened by jonasscheid over 1 year ago - 20 comments

#97 - Update comet.exe

Issue - State: closed - Opened by jonasscheid over 1 year ago - 3 comments

#96 - Revert to sirius 5.6.3

Pull Request - State: closed - Opened by axelwalter almost 2 years ago

#95 - Update Sirius Linux jar files

Pull Request - State: closed - Opened by axelwalter almost 2 years ago

#94 - sirius 5.6.4-snapshot

Pull Request - State: closed - Opened by axelwalter almost 2 years ago

#93 - update to sirius 5.6.3

Pull Request - State: closed - Opened by axelwalter almost 2 years ago

#92 - Update vcredist2010

Pull Request - State: closed - Opened by poshul almost 2 years ago - 2 comments

#91 - Update MSGF+ to v20230112

Pull Request - State: closed - Opened by bernt-matthias almost 2 years ago - 2 comments

#90 - update to sirius 5.6.3 snapshot

Pull Request - State: closed - Opened by axelwalter about 2 years ago

#89 - update to sirius 5.6.2

Pull Request - State: closed - Opened by axelwalter about 2 years ago

#88 - update to sirius 5.6.1 official release

Pull Request - State: closed - Opened by axelwalter about 2 years ago

#87 - update to sirius 5.6.1

Pull Request - State: closed - Opened by axelwalter about 2 years ago

#86 - Licensefix

Pull Request - State: closed - Opened by poshul about 2 years ago

#85 - [FIX] Licenses

Pull Request - State: closed - Opened by jpfeuffer about 2 years ago

#84 - set Linux Sirius jar file location

Pull Request - State: closed - Opened by axelwalter over 2 years ago

#83 - remove Crux related files (deprecation)

Pull Request - State: closed - Opened by JeeH-K over 2 years ago - 2 comments

#82 - add readmes for updating sirius

Pull Request - State: closed - Opened by axelwalter over 2 years ago

#81 - restructure Sirius

Pull Request - State: closed - Opened by axelwalter over 2 years ago

#80 - update pwiz to 3.0.22187

Pull Request - State: closed - Opened by timosachsenberg over 2 years ago

#79 - Updated thermorawfileparser to 1.4.0

Pull Request - State: closed - Opened by poshul over 2 years ago

#78 - update sirius

Pull Request - State: closed - Opened by axelwalter over 2 years ago

#77 - remove MyriMatch

Pull Request - State: closed - Opened by timosachsenberg about 3 years ago - 1 comment

#76 - [Udpate] SIRIUS to version 4.9.0

Pull Request - State: closed - Opened by oliveralka over 3 years ago

#75 - remove OMSSA because of deprecation

Pull Request - State: closed - Opened by timosachsenberg over 3 years ago

#74 - SIRIUS 4.8.2

Pull Request - State: closed - Opened by oliveralka over 3 years ago - 3 comments

#73 - Update percolator to 3.5 (aka 3.05)

Pull Request - State: closed - Opened by timosachsenberg over 3 years ago

#72 - FIX SIRIUS binary location

Pull Request - State: closed - Opened by oliveralka over 3 years ago

#71 - Upgrade SIRIUS

Pull Request - State: closed - Opened by oliveralka over 3 years ago

#70 - update TRFP123

Pull Request - State: closed - Opened by timosachsenberg over 4 years ago

#69 - [FIX] omssa with depl. target 10.9

Pull Request - State: closed - Opened by oliveralka over 4 years ago

#68 - [FIX] omssa macOS

Pull Request - State: closed - Opened by oliveralka over 4 years ago - 4 comments

#67 - rebuild comet with min_macos_version at more places.

Pull Request - State: closed - Opened by jpfeuffer over 4 years ago

#66 - Update comet on non-Windows to match version

Pull Request - State: closed - Opened by jpfeuffer over 4 years ago

#65 - [ADD] percolator v3.04 MacOS

Pull Request - State: closed - Opened by oliveralka over 4 years ago - 1 comment

#64 - Add files via upload

Pull Request - State: closed - Opened by timosachsenberg over 4 years ago

#63 - update Percolator to 304

Pull Request - State: closed - Opened by timosachsenberg over 4 years ago - 7 comments

#62 - update comet

Pull Request - State: closed - Opened by timosachsenberg over 4 years ago - 2 comments

#61 - Update MSGF+ to v20200314

Pull Request - State: closed - Opened by timosachsenberg over 4 years ago - 2 comments

#60 - Mavenized - LuXor Snapshot 2.1

Pull Request - State: closed - Opened by oliveralka over 4 years ago - 4 comments

#59 - official update

Pull Request - State: closed - Opened by timosachsenberg almost 5 years ago

#58 - Update TRFP to self built 1.2.1

Pull Request - State: closed - Opened by timosachsenberg almost 5 years ago

#57 - [FIX] sign jni inchi lib inside the jar for sirius

Pull Request - State: closed - Opened by jpfeuffer almost 5 years ago

#56 - Update Fido on macOS (min. deployment SDK for codesigning)

Pull Request - State: closed - Opened by jpfeuffer almost 5 years ago

#55 - update to 117

Pull Request - State: closed - Opened by timosachsenberg over 5 years ago

#54 - update version

Pull Request - State: closed - Opened by timosachsenberg over 5 years ago

#53 - [FEATURE] added ThermoRawFileParse 1.1.2

Pull Request - State: closed - Opened by timosachsenberg over 5 years ago

#52 - [Update] SIRIUS 4.0.1 (Build 9)

Pull Request - State: closed - Opened by oliveralka over 5 years ago

#51 - [UPDATE] SIRIUS4.0 -> SIRIUS4.0.1

Pull Request - State: closed - Opened by oliveralka about 6 years ago - 2 comments

#50 - Percolator: Update to v3.02.0 for Linux64 and Windows

Pull Request - State: closed - Opened by lukaszimmermann over 6 years ago - 9 comments

#49 - rm DS_Store

Pull Request - State: closed - Opened by Leon-Bichmann over 6 years ago

#48 - Add2/maracluster

Pull Request - State: closed - Opened by Leon-Bichmann over 6 years ago

#47 - [UPDATE] MSGFPlus to v20180130

Pull Request - State: closed - Opened by oliveralka over 6 years ago - 3 comments

#46 - Java 9/10 issue

Issue - State: closed - Opened by oliveralka over 6 years ago - 1 comment

#45 - Add/maracluster executables 0.05

Pull Request - State: closed - Opened by Leon-Bichmann over 6 years ago

#44 - update MaRaCluster OSX executable

Pull Request - State: closed - Opened by Leon-Bichmann over 6 years ago

#43 - Feature/maraclust executables

Pull Request - State: closed - Opened by Leon-Bichmann over 6 years ago

#42 - [FIX] Set library rpath

Pull Request - State: closed - Opened by oliveralka over 6 years ago - 1 comment

#41 - Sirius libraries need RPATH fixing for packaging.

Issue - State: closed - Opened by jpfeuffer over 6 years ago
Labels: bug

#40 - Update Sirius 3.5 to Sirius 4.0

Pull Request - State: closed - Opened by oliveralka almost 7 years ago - 2 comments

#39 - [FIX] Make spectrast executable on Mac

Pull Request - State: closed - Opened by lukaszimmermann almost 7 years ago

#38 - Cleaned XTandem folder on mac

Pull Request - State: closed - Opened by jpfeuffer almost 7 years ago - 2 comments

#37 - added maracluster executables

Pull Request - State: closed - Opened by Leon-Bichmann almost 7 years ago - 4 comments

#36 - Added crux-3.1.8b78546 on all 64bit platforms.

Pull Request - State: closed - Opened by jpfeuffer almost 7 years ago

#35 - [UPDATE] Rebuild Percolator for Linux and MacOS with fix for random n…

Pull Request - State: closed - Opened by lukaszimmermann almost 7 years ago - 1 comment

#34 - [FIX] SpectraST Linux_64bit now uses correct libmzmlparser from TPP

Pull Request - State: closed - Opened by lukaszimmermann about 7 years ago - 1 comment

#33 - [UPDATE] Update MSGFPlus.jar to release (v2017.08.23+)

Pull Request - State: closed - Opened by MFreidank about 7 years ago

#32 - [FIX] executable rights linux sirius script

Pull Request - State: closed - Opened by oliveralka about 7 years ago

#31 - [FIX] ADD minimal Sirius script for osx and linux

Pull Request - State: closed - Opened by oliveralka about 7 years ago - 2 comments

#30 - [FIX] sirius script

Pull Request - State: closed - Opened by lukaszimmermann about 7 years ago - 9 comments

#29 - [ADD] Add Trap to sirius script to kill child processes

Pull Request - State: closed - Opened by lukaszimmermann about 7 years ago - 1 comment

#27 - Added ORIGIN to RPATH of Sirius glpk-libs for dpkg-shlibdeps

Pull Request - State: closed - Opened by jpfeuffer about 7 years ago

#26 - Sirius update overwrote modified RPATH

Issue - State: closed - Opened by jpfeuffer about 7 years ago - 2 comments

#25 - Feature/pwiz64 3.0.11252

Pull Request - State: closed - Opened by FabianAicheler about 7 years ago - 2 comments

#24 - Segmentation fault of MyriMatch

Issue - State: closed - Opened by lukaszimmermann about 7 years ago

#23 - [Release_2_3] Prepare THIRDPARTY for OpenMS release 2.3

Pull Request - State: closed - Opened by lukaszimmermann about 7 years ago - 1 comment

#22 - [UPDATE] Update Sirius/CSI:FingerID to Version 3.5.1

Pull Request - State: closed - Opened by oliveralka about 7 years ago

#21 - [FIX] Classpath SiriusAdapter

Pull Request - State: closed - Opened by oliveralka about 7 years ago - 3 comments

#20 - [FIX] classpath Sirius executable linux/mac

Pull Request - State: closed - Opened by oliveralka about 7 years ago

#19 - Sirius LIbraries

Issue - State: closed - Opened by lukaszimmermann over 7 years ago - 3 comments

#18 - [FIX] Correctly set library path for Sirius on Lnx

Pull Request - State: closed - Opened by jpfeuffer over 7 years ago - 1 comment

#17 - Added ORIGIN to RPATH of Sirius libs on lnx.

Pull Request - State: closed - Opened by jpfeuffer over 7 years ago

#16 - Fix/siriuslibpath

Pull Request - State: closed - Opened by lukaszimmermann over 7 years ago - 4 comments

#15 - Change Percolator executable 64bit to statically linked version

Pull Request - State: closed - Opened by lukaszimmermann over 7 years ago - 1 comment

#14 - [ADD] Sirius3.5 (linux, osx, win)

Pull Request - State: closed - Opened by oliveralka over 7 years ago - 11 comments

#13 - Feature/percolator-noxml

Pull Request - State: closed - Opened by mwalzer over 7 years ago - 8 comments

#12 - [Feature] Percolator

Pull Request - State: closed - Opened by jpfeuffer over 7 years ago

#11 - [Add] Comet executables

Pull Request - State: closed - Opened by jpfeuffer over 7 years ago - 2 comments