Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / OpenMS/OpenMS issues and pull requests
#7398 - MacOS CI failing due to brew+GHA python conflict
Issue -
State: closed - Opened by jpfeuffer 7 months ago
- 1 comment
#7397 - [INTERNAL] Simplify how custom OpenMS types are defined
Pull Request -
State: closed - Opened by cbielow 7 months ago
- 2 comments
#7396 - Update existing C++ tutorials
Pull Request -
State: closed - Opened by cbielow 7 months ago
- 1 comment
#7395 - [DOC] Ion mobility converter: clarification of input-output data
Pull Request -
State: closed - Opened by cbielow 7 months ago
#7394 - make pyopenms compile again
Pull Request -
State: closed - Opened by timosachsenberg 7 months ago
- 8 comments
#7393 - Bump src/pyOpenMS/pyopenms-docs from `e75ffd0` to `df06fc8`
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies
#7392 - question: how to adapt MatrixDouble.pyx
Issue -
State: closed - Opened by timosachsenberg 7 months ago
- 7 comments
Labels: question
#7391 - Nightly installers aren't getting linked to their respective 'latest'
Issue -
State: open - Opened by poshul 7 months ago
Labels: CI, sprint candidate
#7390 - Remove unnecessary redeclaration of KNIME version
Pull Request -
State: closed - Opened by poshul 7 months ago
#7389 - Revert to targeting KNIME 5.1
Pull Request -
State: closed - Opened by poshul 7 months ago
#7388 - Only try to download the changelog if do_release
Pull Request -
State: closed - Opened by poshul 7 months ago
#7387 - Trigger openms-ci-full after merging from develop
Pull Request -
State: closed - Opened by poshul 7 months ago
#7386 - Update pyopenms-wheels.yml with latest *-artifacts action version
Pull Request -
State: closed - Opened by poshul 7 months ago
#7385 - Bump github-actions-cpu-cores version
Pull Request -
State: closed - Opened by poshul 7 months ago
#7384 - Is it possible to run MSFraggerAdapter as a "Quick scan" workflow?
Issue -
State: open - Opened by rolivella 7 months ago
- 1 comment
#7383 - [DOC] update citation from OpenMS 2 --> 3
Pull Request -
State: closed - Opened by cbielow 7 months ago
#7382 - Bump src/pyOpenMS/pyopenms-docs from `6a0aab2` to `e75ffd0`
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies
#7381 - TargetedFileConverter issue
Issue -
State: open - Opened by Droslj 7 months ago
#7380 - mzML writer: check that output file is a proper file
Issue -
State: open - Opened by sneumann 7 months ago
#7379 - Update openms_ci_matrix_full.yml
Pull Request -
State: closed - Opened by timosachsenberg 7 months ago
#7378 - Update openms_ci_matrix_full.yml
Pull Request -
State: closed - Opened by timosachsenberg 7 months ago
#7377 - attempt to install eigen from chocolatey
Pull Request -
State: closed - Opened by timosachsenberg 7 months ago
- 1 comment
#7376 - Update MatrixUtils.h with correct(?) eigen include path
Pull Request -
State: closed - Opened by timosachsenberg 7 months ago
- 6 comments
#7375 - mzML writer: no valid checksum
Issue -
State: open - Opened by sneumann 8 months ago
- 1 comment
#7374 - Think about building develop from time to time for ccache
Issue -
State: open - Opened by jpfeuffer 8 months ago
- 7 comments
#7373 - Use v4 artifacts in GHA
Issue -
State: closed - Opened by jpfeuffer 8 months ago
- 3 comments
#7372 - SIRIUS output reader fails (SiriusMzTabWriter.read, CsiFingerIdMzTabWriter.read)
Issue -
State: closed - Opened by NilouJ 8 months ago
- 8 comments
#7371 - Bump contrib from `04d64c6` to `5545518`
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies
#7370 - Update openms_ci_matrix_full.yml
Pull Request -
State: closed - Opened by poshul 8 months ago
#7369 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7368 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7367 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7366 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7365 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7364 - RawFileConverter missing binary for KNIME plugin
Issue -
State: open - Opened by poshul 8 months ago
- 7 comments
#7363 - Follow up SIRIUS changes
Issue -
State: open - Opened by axelwalter 8 months ago
Labels: sprint candidate
#7362 - Use GitHub Release targz on bioconda for autobump?
Issue -
State: open - Opened by jpfeuffer 8 months ago
#7361 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7360 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7359 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7358 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7357 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7356 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7355 - Add KNIME package support for macos arm
Pull Request -
State: closed - Opened by jpfeuffer 8 months ago
#7354 - [DOC] update C++ developer tutorials (part1)
Pull Request -
State: closed - Opened by cbielow 8 months ago
- 1 comment
#7353 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7352 - Update update_nightly.yml testing
Pull Request -
State: closed - Opened by poshul 8 months ago
#7351 - use conda packages for windows ci
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 5 comments
#7350 - Update update_nightly.yml
Pull Request -
State: closed - Opened by poshul 8 months ago
#7349 - Exclude some tests on mac for MRMAssay_test.cpp
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 2 comments
#7348 - Add Apple Silicon support to CI
Pull Request -
State: closed - Opened by jpfeuffer 8 months ago
- 8 comments
#7347 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7346 - Merge latest release into develop
Pull Request -
State: closed - Opened by github-actions[bot] 8 months ago
Labels: feature, automated pr
#7345 - Use system libraries for contrib on Mac
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 2 comments
#7343 - sync with develop
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
#7342 - Caching of contrib in OpenMS CI full action
Issue -
State: open - Opened by timosachsenberg 8 months ago
- 14 comments
#7341 - Update package_general.cmake
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
#7340 - Bump contrib from `3a9eba4` to `5545518`
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies
#7339 - Fix mac runner brew issues
Pull Request -
State: closed - Opened by poshul 8 months ago
- 4 comments
#7337 - fix: installation of examples directory in unnecessary sub-folder
Pull Request -
State: closed - Opened by radusuciu 8 months ago
- 1 comment
#7336 - Update openms_ci_matrix_full.yml
Pull Request -
State: closed - Opened by poshul 8 months ago
#7335 - [refactor] Major refactoring of old static factory code
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 5 comments
#7334 - Update update_nightly.yml
Pull Request -
State: closed - Opened by poshul 8 months ago
- 1 comment
#7333 - OpenMS is not working
Issue -
State: open - Opened by clin888 8 months ago
- 15 comments
#7332 - [DOC] Developer guide cleanup
Pull Request -
State: closed - Opened by cbielow 8 months ago
- 1 comment
#7331 - Exclude some more dlls from packaging
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 10 comments
#7330 - Bump contrib from `5e42765` to `3a9eba4`
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, submodules
#7329 - Stop KNIME site building multiple times on linux in GHA
Pull Request -
State: closed - Opened by poshul 8 months ago
- 3 comments
Labels: enhancement
#7328 - Set KNIME update site to not build on Ubuntu clang++
Pull Request -
State: closed - Opened by poshul 8 months ago
- 6 comments
Labels: enhancement, Review effort [1-5]: 1
#7327 - Use private key in nightly action to be able to trigger other workflow
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 4 comments
Labels: enhancement, Review effort [1-5]: 1
#7326 - remove matrix utils. replace OpenMS matrix class with eigen matrix
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 26 comments
Labels: enhancement, Review effort [1-5]: 4
#7325 - fix nightly
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 3 comments
Labels: enhancement, Review effort [1-5]: 1
#7324 - [DOC] developer documentation update (C++17 etc)
Pull Request -
State: closed - Opened by cbielow 8 months ago
- 2 comments
#7323 - removes need for PSMFeatureExtractor by always adding percolator features
Pull Request -
State: open - Opened by timosachsenberg 8 months ago
- 5 comments
Labels: enhancement, Review effort [1-5]: 3
#7322 - Update executables.cmake
Pull Request -
State: closed - Opened by timosachsenberg 8 months ago
- 5 comments
Labels: enhancement, Review effort [1-5]: 1
#7320 - More flexible handling of doxygen warnings
Pull Request -
State: closed - Opened by cbielow 8 months ago
- 1 comment
#7319 - Q: Feature Finder for IMS data?
Issue -
State: open - Opened by jameswallacew8 8 months ago
- 2 comments
#7318 - pyFLASHDeconv
Pull Request -
State: closed - Opened by JKVISION1101 8 months ago
- 1 comment
#7317 - Update GitHub Actions to Latest Versions in CI Workflow
Pull Request -
State: closed - Opened by poshul 8 months ago
- 4 comments
Labels: enhancement, Review effort [1-5]: 1
#7316 - NSIS installer fails with long file paths
Issue -
State: open - Opened by JeeH-K 8 months ago
- 11 comments
#7315 - Bump src/pyOpenMS/pyopenms-docs from `229a171` to `6a0aab2`
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, submodules
#7314 - MSstatsConverter does not allow subset of experimental design in input cXML
Issue -
State: open - Opened by jpfeuffer 8 months ago
- 1 comment
#7313 - Enhancements in Documentation and Code Readability
Pull Request -
State: closed - Opened by cbielow 8 months ago
- 2 comments
#7312 - folders in build archive no accessible
Issue -
State: closed - Opened by saassli21 8 months ago
- 1 comment
#7311 - Bump src/pyOpenMS/pyopenms-docs from `64016e7` to `229a171`
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies, submodules
#7310 - Comet scores duplicated
Issue -
State: open - Opened by jpfeuffer 8 months ago
- 1 comment
#7309 - nightly merge action fails
Issue -
State: closed - Opened by timosachsenberg 8 months ago
- 6 comments
#7308 - Enhancements and code simplifications in various files
Pull Request -
State: open - Opened by jpfeuffer 9 months ago
- 8 comments
Labels: enhancement
#7307 - Update update_nightly.yml
Pull Request -
State: closed - Opened by poshul 9 months ago
- 1 comment
#7306 - Add action to replace Jenkins at updating the nightly branch every night
Pull Request -
State: closed - Opened by poshul 9 months ago
- 1 comment
#7305 - fix compiler issue
Pull Request -
State: closed - Opened by poshul 9 months ago
- 3 comments
#7304 - Create codium-pr-agent
Pull Request -
State: closed - Opened by timosachsenberg 9 months ago
#7303 - Migrate Dockerfiles from external repository
Pull Request -
State: open - Opened by radusuciu 9 months ago
- 30 comments
#7301 - Update README
Pull Request -
State: closed - Opened by poshul 9 months ago
#7300 - mgf file from single mzML files
Issue -
State: closed - Opened by YasinEl 9 months ago
- 5 comments
#7299 - OpenSwathWorkflow - swath_windows_file type not restricted!
Issue -
State: open - Opened by bruadi 9 months ago
- 16 comments
Labels: critical, bug
#7298 - [FEATURE] Simple, targeted, fast IsobaricWorkflow
Pull Request -
State: open - Opened by jpfeuffer 9 months ago
- 24 comments
#7297 - [Feature] Loading XML from remote locations
Pull Request -
State: open - Opened by jpfeuffer 9 months ago
- 2 comments
#7296 - Enhancements in MSExperiment and MSSpectrum classes
Pull Request -
State: open - Opened by jpfeuffer 9 months ago
- 15 comments
Labels: enhancement
#7295 - Enhancements in Documentation and Code Readability
Pull Request -
State: closed - Opened by cbielow 9 months ago
- 23 comments
Labels: enhancement, Bug fix