Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / OpenChemistry/tomviz issues and pull requests

#2298 - update pybind11 to 2.13.1

Pull Request - State: open - Opened by kevinsmia1939 5 months ago

#2297 - Exporting a movie issue

Issue - State: closed - Opened by IsaacTieu 5 months ago - 2 comments

#2295 - Tomography reconstruction algos disabled

Issue - State: open - Opened by darkworks 7 months ago - 7 comments

#2293 - Binning tilt images does not change pixel size

Issue - State: open - Opened by ercius about 1 year ago - 1 comment

#2291 - FFMPEG vides can crash Powerpoint (Windows)

Issue - State: open - Opened by ercius over 1 year ago

#2289 - Bump requests from 2.20.0 to 2.31.0 in /tests/python

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#2288 - Bump requests from 2.20.0 to 2.31.0 in /acquisition

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#2287 - Fix a few more int overflows from vtkIdType

Pull Request - State: closed - Opened by cryos over 1 year ago

#2286 - The int used by nTuples overflows for big volumes

Pull Request - State: closed - Opened by cryos over 1 year ago - 3 comments

#2285 - Perform memory check on files before loading them in

Pull Request - State: open - Opened by psavery over 1 year ago

#2284 - Allow summed projections in alignment widget

Pull Request - State: closed - Opened by psavery over 1 year ago

#2283 - Rotate axis oppositely for vertical alignment

Pull Request - State: closed - Opened by psavery over 1 year ago - 2 comments

#2282 - Try new version of TBB to fix Mac CI

Pull Request - State: open - Opened by psavery almost 2 years ago

#2281 - Improve alignment preview image color ranges

Pull Request - State: closed - Opened by psavery almost 2 years ago - 5 comments

#2280 - Change the default thick slice type to mean

Pull Request - State: closed - Opened by psavery almost 2 years ago

#2279 - Reconstruction slices saturated in tilt axis alignment wizard

Issue - State: closed - Opened by ercius almost 2 years ago - 1 comment

#2278 - Remove old CI code and scripts

Pull Request - State: closed - Opened by psavery almost 2 years ago

#2277 - Add "Export Movie" button to the animation helper

Pull Request - State: closed - Opened by psavery almost 2 years ago

#2276 - Add button to set slice normal to view

Pull Request - State: closed - Opened by psavery almost 2 years ago

#2275 - Animation helper "Export movie" button

Issue - State: closed - Opened by ercius almost 2 years ago - 1 comment

#2274 - Is there any docs for the python API?

Issue - State: closed - Opened by RupertPaoZ almost 2 years ago - 4 comments

#2273 - Add slice module to animation helper

Pull Request - State: closed - Opened by psavery almost 2 years ago - 1 comment

#2272 - Create README.md with link to tomvizdocs repo

Pull Request - State: closed - Opened by cjh1 almost 2 years ago

#2271 - CVE-2007-4559 Patch

Pull Request - State: closed - Opened by TrellixVulnTeam about 2 years ago - 2 comments

#2270 - Bump pillow from 8.3.2 to 9.3.0 in /acquisition

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#2269 - Linux version (1.10.1) does not run under Fedora 36.

Issue - State: open - Opened by Plutonium5793 about 2 years ago - 1 comment

#2268 - Prevent Crash for Large memory Usage

Issue - State: open - Opened by Hovden about 2 years ago
Labels: bug

#2267 - Update tomviz version for source tarball

Pull Request - State: closed - Opened by psavery about 2 years ago

#2266 - Wait to load looking glass plugin until used

Pull Request - State: closed - Opened by psavery about 2 years ago

#2265 - Fix python syntax highlighter

Pull Request - State: closed - Opened by psavery about 2 years ago

#2264 - Custom transformation - need to reshape array to (M, N, 1) to avoid problem

Issue - State: open - Opened by aaron4444 about 2 years ago - 1 comment

#2263 - Adjust to Tiled API change

Pull Request - State: closed - Opened by cjh1 about 2 years ago

#2262 - Fix date range

Pull Request - State: closed - Opened by cjh1 about 2 years ago

#2261 - Account for breaking changes in the Tiled API

Pull Request - State: closed - Opened by cryos about 2 years ago

#2260 - Add Nature Communications citation to welcome window

Pull Request - State: open - Opened by jtschwar over 2 years ago - 5 comments

#2259 - Append real-time tomography user manual to help documents

Pull Request - State: open - Opened by jtschwar over 2 years ago

#2257 - Update for tiled v0.1.0a66 API changes.

Pull Request - State: closed - Opened by danielballan over 2 years ago - 1 comment

#2256 - Add support for exporting dataset to Tiled

Pull Request - State: closed - Opened by cjh1 over 2 years ago

#2255 - Force gradient opacity for multi-volumes only

Pull Request - State: closed - Opened by psavery over 2 years ago

#2254 - Guard again 'stop' being None

Pull Request - State: closed - Opened by cjh1 over 2 years ago - 2 comments

#2253 - All raw FXI data is now nested

Pull Request - State: closed - Opened by cryos over 2 years ago

#2252 - Add filter by scan id

Pull Request - State: closed - Opened by cjh1 over 2 years ago

#2251 - Get the angles for the FXI data in degrees

Pull Request - State: closed - Opened by cryos over 2 years ago

#2250 - Tiled tweaks

Pull Request - State: closed - Opened by cryos over 2 years ago

#2249 - Pore segmentation and size distribution

Issue - State: open - Opened by rgmendes13 over 2 years ago

#2248 - Not possible to enter tilt series angles

Issue - State: closed - Opened by rgmendes13 over 2 years ago - 4 comments

#2247 - Show PyXRF import error in tooltip

Pull Request - State: closed - Opened by psavery over 2 years ago

#2246 - Report missing dependencies

Issue - State: closed - Opened by cjh1 over 2 years ago

#2245 - Allow header size/offset to be set in raw reader dialog

Issue - State: open - Opened by cjh1 over 2 years ago

#2243 - Add option to specify voxel size rather than sample extent

Issue - State: open - Opened by cjh1 over 2 years ago

#2242 - Unit on ruler are not updated if changed in properties panel

Issue - State: open - Opened by cjh1 over 2 years ago

#2241 - Manual tilt axis incorrect when "vertical" selected

Issue - State: closed - Opened by ercius over 2 years ago - 5 comments

#2240 - Ctf correction

Pull Request - State: closed - Opened by jtschwar over 2 years ago

#2239 - Add cross-correlation to real-time tomography

Pull Request - State: closed - Opened by jtschwar over 2 years ago

#2238 - Add cross-correlation to real-time tomography

Pull Request - State: closed - Opened by jtschwar over 2 years ago

#2237 - Databroker/Tiled optimization: use a small in-memory cache.

Pull Request - State: closed - Opened by danielballan over 2 years ago

#2236 - Fix python paths during pyxrf process dialog setup

Pull Request - State: closed - Opened by psavery over 2 years ago

#2235 - PyXRF Workflow Fixes

Pull Request - State: closed - Opened by psavery over 2 years ago

#2234 - Bump windows CI to windows-2019

Pull Request - State: closed - Opened by psavery over 2 years ago

#2233 - Bump pillow from 8.3.2 to 9.0.1 in /acquisition

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#2232 - Fxi workflow improvements

Pull Request - State: closed - Opened by psavery over 2 years ago - 1 comment

#2230 - FXI Workflow Improvements

Pull Request - State: closed - Opened by psavery over 2 years ago - 1 comment

#2229 - First pass at PyXRF workflow

Pull Request - State: closed - Opened by psavery over 2 years ago

#2228 - First pass at migrating the code to use tiled

Pull Request - State: closed - Opened by cryos over 2 years ago - 3 comments

#2227 - Use file(RELATIVE_PATH ...) so we don't need 3.20

Pull Request - State: closed - Opened by cjh1 over 2 years ago

#2226 - Add support for operator data source arguments to state files

Pull Request - State: closed - Opened by psavery almost 3 years ago

#2225 - Tomviz MacOSX Cannot Render More Than 2 Volumes at Same Time

Issue - State: open - Opened by jtschwar almost 3 years ago - 1 comment

#2224 - Add animation helper dialog with camera orbit

Pull Request - State: closed - Opened by psavery almost 3 years ago - 3 comments

#2223 - Use cmake_path to compute path to python libraries

Pull Request - State: closed - Opened by psavery almost 3 years ago - 1 comment

#2222 - Use variable paths for installing targets

Pull Request - State: closed - Opened by psavery almost 3 years ago

#2221 - Upgrade Mac on azure-pipelines to 10.15

Pull Request - State: closed - Opened by psavery almost 3 years ago

#2220 - Bump pillow from 8.3.2 to 9.0.0 in /acquisition

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#2219 - Add help for the new operators

Pull Request - State: closed - Opened by psavery almost 3 years ago

#2218 - Add ITK Elastix registration operator

Pull Request - State: closed - Opened by psavery almost 3 years ago - 4 comments

#2217 - Allow enumeration data types other than int

Pull Request - State: closed - Opened by psavery almost 3 years ago - 1 comment

#2216 - Add manual manipulation operator

Pull Request - State: closed - Opened by psavery almost 3 years ago - 1 comment

#2215 - Add "dataset" parameter option to description.json

Pull Request - State: closed - Opened by psavery about 3 years ago

#2214 - Crashes when clicking "About Tomviz" (OSX)

Issue - State: open - Opened by Hovden about 3 years ago - 4 comments

#2213 - Clean up language for json files

Pull Request - State: closed - Opened by jtschwar about 3 years ago - 3 comments

#2212 - Add time series steps to DataSource and loading

Pull Request - State: closed - Opened by psavery about 3 years ago - 9 comments

#2211 - Custom colormaps

Issue - State: open - Opened by anderskaestner about 3 years ago

#2210 - Override qSetMessagePattern in tomviz

Pull Request - State: closed - Opened by psavery about 3 years ago

#2209 - Allow real_time computation to exit when user completes the experiment

Pull Request - State: closed - Opened by jtschwar about 3 years ago

#2208 - Fix up realtime tomography packaging

Pull Request - State: closed - Opened by cjh1 about 3 years ago

#2207 - Move the install location one folder up

Pull Request - State: closed - Opened by jtschwar about 3 years ago

#2206 - Add a button to create solid colormaps

Pull Request - State: closed - Opened by psavery about 3 years ago

#2205 - Fix link for install location

Pull Request - State: closed - Opened by jtschwar about 3 years ago

#2204 - Fix issues for real time on windows environment

Pull Request - State: closed - Opened by jtschwar about 3 years ago

#2201 - Save the description.json alongside the script

Pull Request - State: closed - Opened by psavery about 3 years ago

#2190 - Remove unused continuous integration configs

Pull Request - State: closed - Opened by cclauss about 3 years ago

#2189 - Do not ignore undefined names in Python code

Pull Request - State: closed - Opened by cclauss about 3 years ago

#2180 - Paraview master updates

Pull Request - State: closed - Opened by psavery over 3 years ago