OSOceanAcoustics/echopype issues and pull requests

#1514 - Consolidate.add_depth not working properly

Issue - State: open - Opened by marqjace 16 days ago

#1511 - [1485] Moved the check for duplicate times to after NMEA selection

Pull Request - State: open - Opened by dbashford-NOAA 21 days ago - 4 comments

#1510 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago

#1509 - Feature/uv migration

Pull Request - State: open - Opened by skprasadu about 1 month ago

#1508 - Enable processing CW/FM interleaving data [all tests ci]

Pull Request - State: open - Opened by leewujung about 2 months ago - 1 comment

#1507 - Allow processing CW/FM interleaving data

Issue - State: open - Opened by leewujung about 2 months ago

#1506 - Store ping-by-ping filter coefficients

Issue - State: open - Opened by leewujung about 2 months ago

#1505 - [Data conversion] Pulse length not in SV_OFFSET.

Issue - State: open - Opened by IanTBlack about 2 months ago
Labels: data conversion

#1504 - Add test to validate actual range calculations

Pull Request - State: closed - Opened by shivam096 about 2 months ago - 1 comment

#1503 - Add order agnostic dimension in masks

Pull Request - State: closed - Opened by shivam096 2 months ago - 1 comment

#1502 - Update `apply_mask` to only take in boolean or 0/1 masks

Pull Request - State: closed - Opened by shivam096 2 months ago - 2 comments

#1501 - Standardize Time Encoding

Issue - State: open - Opened by shivam096 2 months ago

#1500 - enh: add dimension alignment support for `swap_dims_channel_frequency`

Pull Request - State: open - Opened by praneethratna 2 months ago - 1 comment

#1499 - Add time decode [all tests ci]

Pull Request - State: closed - Opened by shivam096 3 months ago - 4 comments

#1498 - Timestamps encoding inconsistency in the `Platform` group

Issue - State: closed - Opened by leewujung 3 months ago - 2 comments
Labels: data format

#1497 - Fix utcnow

Pull Request - State: closed - Opened by shivam096 3 months ago - 2 comments

#1496 - Make apply_mask function agnostic to the dimensions order.

Pull Request - State: closed - Opened by NikiDab 3 months ago - 8 comments

#1494 - chore(deps): bump actions/setup-python from 5.5.0 to 5.6.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies, github_actions

#1493 - Update platform - misalignment of coordinates

Issue - State: open - Opened by hentatisundberg 3 months ago
Labels: bug

#1492 - Added support for split-beam angle computation with mixed channel beam types in complex mode

Pull Request - State: open - Opened by beatfactor 3 months ago - 8 comments

#1491 - UnicodeDecode error

Issue - State: closed - Opened by ksawada-13 4 months ago - 2 comments

#1490 - Update data processing docs and contributor guide

Pull Request - State: closed - Opened by leewujung 4 months ago - 1 comment
Labels: docs

#1489 - Update contributing section in docs

Pull Request - State: closed - Opened by leewujung 4 months ago
Labels: docs

#1488 - Support dimension alignment with `frequency_nominal` for all `ep.consolidate` functions

Issue - State: open - Opened by leewujung 4 months ago
Labels: enhancement

#1487 - package dependencies for echopype

Issue - State: closed - Opened by bberges 4 months ago - 11 comments

#1486 - Construct MVBS dataset using either `channel` or `frequency_nominal`

Issue - State: open - Opened by leewujung 4 months ago - 1 comment
Labels: bug

#1485 - Select nmea sentence type first before checking duplicates

Issue - State: open - Opened by leewujung 4 months ago
Labels: enhancement

#1484 - Replace `utcnow()` with timezone-aware object

Pull Request - State: closed - Opened by leewujung 4 months ago - 5 comments

#1483 - Expand ping time preemptively in `get_vend_cal_params_power`

Pull Request - State: closed - Opened by ctuguinay 4 months ago - 2 comments
Labels: bug, enhancement

#1482 - Add vessel speed over ground [all tests ci]

Pull Request - State: open - Opened by NikiDab 4 months ago - 19 comments

#1481 - chore(deps): bump actions/setup-python from 5.4.0 to 5.5.0

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies, github_actions

#1480 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago

#1479 - chore(deps): bump actions/cache from 4.2.2 to 4.2.3

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies, github_actions

#1478 - add_location() fails if times aren't unique

Issue - State: open - Opened by seagrinch 5 months ago - 2 comments

#1477 - open_converted() does not seem to work with netcdf

Issue - State: open - Opened by seagrinch 5 months ago - 1 comment

#1476 - Attempt at fixing #1377

Pull Request - State: closed - Opened by spacetimeengineer 5 months ago - 7 comments

#1475 - conflicting dimensions for 'ping_time' and 'ping_time': 'transmit_frequency_start'

Issue - State: open - Opened by gcutt 5 months ago - 5 comments
Labels: bug, data conversion

#1474 - `actual_range` attribute values from `apply_mask` are not set correctly

Issue - State: closed - Opened by leewujung 5 months ago - 2 comments
Labels: bug

#1473 - chore(deps): bump actions/cache from 4.2.1 to 4.2.2

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#1472 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago

#1471 - docs: fix little typo

Pull Request - State: closed - Opened by jmeischner 5 months ago - 2 comments

#1470 - Enhance `compute_MVBS` feasability

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 2 comments
Labels: enhancement

#1469 - chore(deps): bump actions/cache from 4.2.0 to 4.2.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#1468 - Replace `pkg_resources.resource_string` with `importlib.resources.files` [all tests ci]

Pull Request - State: closed - Opened by leewujung 5 months ago - 1 comment
Labels: dependencies

#1467 - `pkg_resources` is removed in Python 3.12

Issue - State: closed - Opened by leewujung 5 months ago - 1 comment
Labels: dependencies

#1466 - Update workflows to use python 3.12 and ubuntu 22.04 [all tests ci]

Pull Request - State: closed - Opened by leewujung 5 months ago - 1 comment
Labels: infrastructure

#1465 - Add v0.9.1 and v0.10.0 release notes to docs

Pull Request - State: closed - Opened by leewujung 5 months ago
Labels: docs

#1464 - [Data conversion] ...Echopype cannot convert Nortek ad2cp

Issue - State: closed - Opened by ZHANGGU 5 months ago - 5 comments
Labels: data conversion

#1463 - Use normalization to compute echo range scaling

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 3 comments
Labels: bug

#1462 - Set decode timedelta to False since it will default to this in later xarray version [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 3 comments
Labels: bug

#1461 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago

#1460 - Pin scipy to temporarily ensure that rotation matrix calculation does not fail [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 1 comment
Labels: bug

#1459 - Pin scipy

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 1 comment

#1458 - Fill in NaN for missing EK80 coefficients [all tests ci]

Pull Request - State: closed - Opened by leewujung 5 months ago - 7 comments
Labels: data conversion

#1457 - Remove `setattr` from EchoData [all tests ci]

Pull Request - State: closed - Opened by leewujung 5 months ago - 2 comments
Labels: infrastructure

#1456 - Inconsistency of if `Platform/NMEA` group exists

Issue - State: open - Opened by leewujung 5 months ago
Labels: enhancement, data conversion

#1455 - Replace previous arXiv citation with recent ICES paper citation

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 1 comment

#1454 - Chunks as dictionaries in `_get_auto_chunk` [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 2 comments
Labels: bug

#1453 - Dataset.dims to Dataset.sizes [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 2 comments
Labels: bug

#1452 - Compute dask array before np array equal [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 2 comments
Labels: bug

#1451 - Check if there exist any swap files before cleaning them up [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 2 comments
Labels: bug

#1450 - Fix deprecation warning for truth value of an empty array [all tests ci]

Pull Request - State: closed - Opened by ctuguinay 5 months ago - 7 comments
Labels: bug

#1449 - Migrate from Conda to "uv"

Issue - State: open - Opened by oftfrfbf 6 months ago
Labels: enhancement, infrastructure

#1448 - Fix invalid \d warning by using raw string

Pull Request - State: closed - Opened by leewujung 6 months ago - 1 comment

#1447 - Backward compatibility of raw-converted dataset with `xr.DataTree` [all tests ci]

Pull Request - State: closed - Opened by oftfrfbf 6 months ago - 39 comments
Labels: bug, AA SI

#1446 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago

#1445 - chore(deps): bump actions/setup-python from 5.3.0 to 5.4.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#1444 - Resolve critical warnings from #1439

Pull Request - State: closed - Opened by ctuguinay 6 months ago - 2 comments

#1443 - Update cff citation file

Pull Request - State: closed - Opened by leewujung 6 months ago
Labels: docs

#1442 - Add manual trigger to pypi workflow

Pull Request - State: closed - Opened by leewujung 6 months ago
Labels: infrastructure

#1441 - Use _ for typing extensions

Pull Request - State: closed - Opened by leewujung 6 months ago - 1 comment

#1440 - Add `type-extensions` to requirements.txt

Pull Request - State: closed - Opened by leewujung 6 months ago
Labels: dependencies

#1439 - Resolve critical warnings revealed in tests

Issue - State: open - Opened by leewujung 6 months ago - 11 comments
Labels: dependencies

#1438 - Bump codespell version, add exceptions

Pull Request - State: closed - Opened by leewujung 6 months ago
Labels: infrastructure

#1437 - Add codespell exception

Pull Request - State: closed - Opened by leewujung 6 months ago
Labels: infrastructure

#1436 - Assemble AD2CP timestamp with nanosecond precision

Pull Request - State: closed - Opened by leewujung 6 months ago - 1 comment
Labels: data conversion

#1435 - Add assign actual range utility function

Pull Request - State: closed - Opened by ctuguinay 6 months ago - 2 comments
Labels: enhancement, feature request

#1434 - Use `import_resources.files` instead of the legacy `open_text`

Pull Request - State: closed - Opened by leewujung 6 months ago - 1 comment
Labels: bug

#1433 - Fix tests that fail from new Xarray variable and attribute assignment updates

Pull Request - State: closed - Opened by ctuguinay 6 months ago - 1 comment
Labels: bug

#1432 - error importing echopype in fresh installation (version 0.8.4)

Issue - State: closed - Opened by marianpena 6 months ago - 13 comments
Labels: dependencies

#1431 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 3 comments

#1430 - chore(deps): bump pypa/gh-action-pypi-publish from 1.12.3 to 1.12.4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies

#1429 - Pin `zarr` and `netcdf4` temporarily [all tests ci]

Pull Request - State: closed - Opened by leewujung 6 months ago - 1 comment
Labels: infrastructure

#1428 - Migrate to Zarr-Python 3

Issue - State: open - Opened by hentatisundberg 7 months ago - 8 comments
Labels: infrastructure

#1427 - Remove `sanitize_dtypes` redundancy in `EchoData` methods

Issue - State: open - Opened by leewujung 7 months ago
Labels: enhancement

#1426 - pip install failed with HDF5_DIR environment variable issue

Issue - State: open - Opened by leewujung 7 months ago - 1 comment
Labels: infrastructure

#1425 - Update workflows to python 3.12 [all tests ci]

Pull Request - State: closed - Opened by leewujung 7 months ago - 1 comment
Labels: infrastructure

#1424 - Update python version in workflows

Issue - State: closed - Opened by leewujung 7 months ago - 1 comment
Labels: infrastructure

#1423 - Change default PR-triggered test behavior

Issue - State: open - Opened by leewujung 7 months ago - 1 comment
Labels: infrastructure

#1422 - Set max python version <3.12 [all tests ci]

Pull Request - State: closed - Opened by leewujung 7 months ago - 1 comment
Labels: infrastructure

#1421 - Migrate to use `pyproject.toml` fully

Issue - State: open - Opened by leewujung 7 months ago - 6 comments
Labels: infrastructure

#1420 - Backward compatibility of raw-converted dataset after `xarray.DataTree` migration

Issue - State: closed - Opened by leewujung 7 months ago - 13 comments
Labels: data conversion, AA SI

#1419 - Support Python 3.12 and Migrate to Xarray DataTree

Pull Request - State: closed - Opened by ctuguinay 7 months ago - 4 comments
Labels: data format, infrastructure

#1418 - Echopype publishes python-3.12 packages eventhough it is not compatible with python-3.12

Issue - State: closed - Opened by peter-urban 7 months ago - 3 comments
Labels: infrastructure

#1417 - chore(deps): bump pypa/gh-action-pypi-publish from 1.12.2 to 1.12.3

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#1416 - chore(deps): bump actions/cache from 4.1.2 to 4.2.0

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#1415 - Issue on `open_raw()`

Issue - State: closed - Opened by dhonanhibatullah 8 months ago - 4 comments

#1414 - Updated paths in test_align_to_ping_time_glider_azfp to use pytest fixture

Pull Request - State: closed - Opened by oftfrfbf 8 months ago - 1 comment
Labels: bug

#1413 - [Data conversion] ValueError when attempting to import raw EK80 data

Issue - State: closed - Opened by tobitobitobi123 8 months ago - 3 comments
Labels: data conversion

#1412 - Add support for AZFP 130kHz

Pull Request - State: closed - Opened by ctuguinay 8 months ago - 5 comments

GitHub / OSOceanAcoustics/echopype issues and pull requests