Ecosyste.ms: Issues

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GitHub / OHDSI/WebAPI issues and pull requests

#2416 - Introduce support for InterSystems IRIS

Pull Request - State: open - Opened by bdeboe about 1 month ago - 2 comments

#2415 - Removed dependency on commons lang

Pull Request - State: closed - Opened by chrisknoll about 2 months ago

#2414 - [issue-2379][issue-2408] Migrated JDBC Snowflake driver to v3.20.0

Pull Request - State: closed - Opened by oleg-odysseus about 2 months ago - 1 comment

#2409 - Add IRIS support to WebAPI

Issue - State: open - Opened by anthonysena 2 months ago - 7 comments

#2408 - Update JDBC drivers for various DBs

Issue - State: closed - Opened by anthonysena 2 months ago

#2407 - Non-Standard to Standard Concepts mapping API

Pull Request - State: open - Opened by alex-odysseus 2 months ago

#2406 - Add endpoint to clear the cdm_cache and achilles_cache

Pull Request - State: closed - Opened by amarsan 2 months ago - 5 comments

#2405 - Bug Fix: Return correct count values for RC/DRC and PC/DPC

Pull Request - State: closed - Opened by amarsan 2 months ago

#2404 - Add handling for Snowflake IN clause limit

Pull Request - State: closed - Opened by anthonysena 2 months ago

#2403 - Extending Concept Set Items with Annotations

Pull Request - State: closed - Opened by alex-odysseus 3 months ago - 4 comments

#2401 - Bump commons-io:commons-io from 2.7 to 2.14.0

Pull Request - State: open - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#2400 - Measurement calculations

Pull Request - State: open - Opened by alex-odysseus 4 months ago

#2397 - Case Cohort Builder

Issue - State: open - Opened by khaynes001 4 months ago

#2396 - Fix for compile error seen for Eclipse (issue 2390) (#2395)

Pull Request - State: closed - Opened by chrisknoll 4 months ago

#2395 - Fix for compile error seen for Eclipse (issue 2390)

Pull Request - State: closed - Opened by greshje 4 months ago - 1 comment

#2393 - Re-introduce Caching

Pull Request - State: closed - Opened by chrisknoll 4 months ago - 1 comment

#2391 - OpenIDC connection does not grant Permissions in Atlas

Issue - State: open - Opened by shorrocka 4 months ago - 1 comment

#2390 - Fix for compile error seen for Eclipse

Issue - State: closed - Opened by greshje 4 months ago - 1 comment

#2389 - Tools module functionality

Pull Request - State: open - Opened by alex-odysseus 5 months ago - 1 comment

#2387 - Application usage statistics

Pull Request - State: open - Opened by alex-odysseus 5 months ago

#2386 - Bump org.apache.shiro:shiro-core from 1.12.0 to 1.13.0

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#2384 - Bump org.postgresql:postgresql from 42.3.7 to 42.3.9

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 4 comments
Labels: dependencies

#2383 - Implement Caching for Permissions and asset lists

Issue - State: closed - Opened by chrisknoll 6 months ago

#2382 - fix The Korean sentence order in Authorship description

Pull Request - State: closed - Opened by tandara0 6 months ago

#2380 - Add check_connection flag to SourceRequest

Pull Request - State: closed - Opened by ganisimov 6 months ago - 1 comment

#2379 - Upgrade Snowflake JDBC to v3.17.0

Issue - State: closed - Opened by alondhe 6 months ago - 1 comment

#2378 - MDACA 3.0.1

Pull Request - State: open - Opened by mdaca 7 months ago - 5 comments

#2377 - Fix SecurityIT.java Integration Tests

Issue - State: open - Opened by pieterlukasse 8 months ago

#2375 - Fix PermissionTest.java tests

Issue - State: open - Opened by pieterlukasse 8 months ago

#2374 - Allow to skip connection check for certain sources

Pull Request - State: closed - Opened by ganisimov 8 months ago - 3 comments

#2371 - Update PersonService.java

Pull Request - State: closed - Opened by luisleon1894 8 months ago - 1 comment

#2370 - Proposal: Profiles section - compatibility with bigints types

Issue - State: closed - Opened by luisleon1894 8 months ago - 2 comments

#2369 - Add support for Team level authorization in Atlas/WebAPI

Issue - State: open - Opened by pieterlukasse 8 months ago - 2 comments

#2368 - Fix: reinstate tests

Pull Request - State: closed - Opened by pieterlukasse 9 months ago - 8 comments

#2367 - CDM session credential pass-through.

Issue - State: open - Opened by natb1 9 months ago

#2366 - AtlasRegularSecurity breaks connection to WebAPI

Issue - State: closed - Opened by nzurawski 9 months ago - 4 comments

#2365 - Cannot open ports on Tomcat

Issue - State: closed - Opened by nzurawski 9 months ago - 1 comment

#2364 - OHDSI WebAPI JDBC Driver Connectivity Issues With DATABRICKS

Issue - State: closed - Opened by cyongg 9 months ago - 9 comments

#2362 - Illegal Annotation Exception

Issue - State: closed - Opened by nzurawski 9 months ago - 5 comments

#2361 - Fix generation status query errors when source is deleted.

Pull Request - State: closed - Opened by chrisknoll 9 months ago

#2360 - Error fetching generations for CohortPathways

Issue - State: closed - Opened by chrisknoll 9 months ago - 1 comment

#2359 - Provide configuration option to disable source connection checks

Issue - State: closed - Opened by anthonysena 9 months ago - 2 comments

#2355 - Permission Checks now use Wildcard semantics.

Pull Request - State: closed - Opened by chrisknoll 11 months ago - 3 comments

#2354 - WebAPI 3.0 Change List

Issue - State: open - Opened by chrisknoll 11 months ago - 5 comments

#2353 - has[Write|Read]Access does not use wildcard permissions

Issue - State: closed - Opened by chrisknoll 11 months ago - 1 comment

#2352 - Two sequences for sec_permission table

Issue - State: open - Opened by m0nhawk 11 months ago - 3 comments

#2350 - Priority call causes application hang in initial load for ATLAS

Issue - State: closed - Opened by fdefalco 11 months ago - 1 comment

#2346 - Proximal logic for events while designing a Cohort

Issue - State: closed - Opened by alex-odysseus 11 months ago - 1 comment
Labels: feature

#2342 - Fix/flyway atlas read only user

Pull Request - State: open - Opened by rkboyce 12 months ago - 4 comments

#2341 - Permission Performance Optimizations

Pull Request - State: closed - Opened by chrisknoll 12 months ago

#2340 - Vocabulary from different source is not recognized by Atlas

Issue - State: closed - Opened by davidhcar 12 months ago - 6 comments

#2332 - Accessing Cohort elements programmatically

Issue - State: open - Opened by alex-odysseus about 1 year ago
Labels: feature

#2330 - Tools module

Issue - State: open - Opened by alex-odysseus about 1 year ago - 1 comment
Labels: feature

#2328 - Bump org.apache.shiro:shiro-web from 1.12.0 to 1.13.0

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#2325 - Calculation function within Cohort Definitions

Issue - State: open - Opened by alex-odysseus about 1 year ago - 1 comment
Labels: feature

#2322 - If a user has WRITE permission to an object, they should see this object in the list

Issue - State: open - Opened by ttemnikova about 1 year ago - 3 comments
Labels: security

#2321 - Users can see all objects via direct link despite having no READ permissions

Issue - State: closed - Opened by ttemnikova about 1 year ago - 4 comments
Labels: bug

#2319 - Bump org.json:json from 20230227 to 20231013

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#2318 - Add annotations to Concept Set Items

Issue - State: closed - Opened by alex-odysseus about 1 year ago - 1 comment
Labels: feature

#2315 - Add concept sets search (mergeable)

Pull Request - State: open - Opened by alex-odysseus over 1 year ago - 1 comment

#2296 - Atlas 2.13.0 returns wrong values for RC/DRC and PC/DPC

Issue - State: closed - Opened by TomWhite-MedStar over 1 year ago - 12 comments
Labels: help wanted

#2294 - Enhancement: cohortdefinition/info/afterdate GET request

Issue - State: open - Opened by TomWhite-MedStar over 1 year ago - 1 comment

#2284 - Snowflake SQL IN where clause contains maximum number of expressions allowed

Issue - State: closed - Opened by davidhcar over 1 year ago - 6 comments

#2274 - Clear Server Cache button in ATLAS does not work

Issue - State: closed - Opened by konstjar over 1 year ago - 3 comments

#2244 - Upgrade to Spring Boot 2.3

Issue - State: open - Opened by anthonysena almost 2 years ago - 6 comments

#2243 - Enable GitHub Actions for unit tests

Issue - State: closed - Opened by anthonysena almost 2 years ago - 1 comment
Labels: help wanted

#2223 - Improve Shiro logging

Issue - State: open - Opened by alondhe almost 2 years ago - 2 comments

#2221 - Reusables Refactoring

Issue - State: open - Opened by mrechkem almost 2 years ago - 1 comment

#2215 - Refactored imports to depend on org.apache.commons:commons-lang3

Pull Request - State: closed - Opened by ecruz165 almost 2 years ago - 5 comments

#2213 - Possible N+1 query problem when fetching job status.

Issue - State: open - Opened by chrisknoll almost 2 years ago - 5 comments
Labels: bug

#2169 - Bump postgresql from 42.3.7 to 42.3.8

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 3 comments
Labels: dependencies

#2166 - Add information about Tags into the existing model object expressions

Issue - State: open - Opened by alex-odysseus about 2 years ago - 2 comments
Labels: feature

#2164 - Switch to Eclipse Temurin Java base image due to openjdk deprecation

Pull Request - State: closed - Opened by chgl about 2 years ago - 3 comments

#2150 - Changing Java version 11 to 8 in the docker settings is recommended.

Pull Request - State: closed - Opened by jungsungjae about 2 years ago

#2073 - Snowflake dialect support

Pull Request - State: closed - Opened by alex-odysseus over 2 years ago - 2 comments

#2055 - Spark JDBC connection to Azure Delta Lake issue

Issue - State: open - Opened by CyloNox over 2 years ago - 5 comments

#1939 - Cohort generation on RedShift - serializable isolation violation on table Error: 1023

Issue - State: open - Opened by anthonysena over 3 years ago - 16 comments
Labels: bug, known issue