OHBA-analysis/osl-dynamics issues and pull requests

#83 - Cleanup: SE-DyNeMo

Pull Request - State: closed - Opened by RukuangHuang over 1 year ago

#82 - Updated hbaws installation instructions

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#81 - Bug during random_state_time_course_initialization in HMM

Issue - State: closed - Opened by RukuangHuang over 1 year ago - 3 comments
Labels: bug

#80 - Fix/dataset sorting

Pull Request - State: closed - Opened by evanr70 over 1 year ago

#79 - Loading prepared data does not preserve the ordering of subjects

Issue - State: closed - Opened by cgohil8 over 1 year ago - 4 comments

#78 - Recommendations for post-hoc analysis and example code

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#77 - New simplified user interface for the HMM/DyNeMo

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#76 - Updated alpha thresholding functions

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#75 - Feature/logging

Pull Request - State: closed - Opened by evanr70 over 1 year ago - 1 comment

#74 - Remove ncols from tqdm calls

Pull Request - State: closed - Opened by evanr70 over 1 year ago

#73 - Feature/directional sedynemo

Pull Request - State: closed - Opened by RukuangHuang over 1 year ago

#72 - Re-initialisation compatibility with TensorFlow 2.10+

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#71 - Tutorials: new DyNeMo tutorials

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#70 - Option to calculate regression spectra on a multitaper spectrogram (rather than Welch)

Issue - State: closed - Opened by cgohil8 over 1 year ago - 1 comment
Labels: enhancement

#69 - HMM/DyNeMo post-hoc spectral analysis recommendations should be documented

Issue - State: closed - Opened by cgohil8 over 1 year ago
Labels: documentation

#68 - Simplify user interface

Issue - State: closed - Opened by cgohil8 over 1 year ago
Labels: enhancement

#67 - Save osl-dynamics version with models.

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#66 - Record the osl-dynamics version when we save a model

Issue - State: closed - Opened by cgohil8 over 1 year ago - 1 comment
Labels: enhancement

#65 - Add keyword arguments when plotting GMM fit of mode mixing coefficients

Pull Request - State: closed - Opened by scho97 over 1 year ago
Labels: enhancement

#64 - Parallelised Data Preparation

Pull Request - State: closed - Opened by evanr70 over 1 year ago
Labels: enhancement

#63 - Tutorials

Pull Request - State: closed - Opened by cgohil8 over 1 year ago
Labels: documentation

#62 - Refact: New LearnableTensorLayer and refactored layers.

Pull Request - State: closed - Opened by RukuangHuang over 1 year ago - 1 comment

#61 - Parallelized data loading

Pull Request - State: closed - Opened by evanr70 over 1 year ago - 3 comments

#60 - Rescaling regression coefficients of PSDs with maximum alpha values

Pull Request - State: closed - Opened by scho97 over 1 year ago - 6 comments
Labels: enhancement

#59 - Feat: option to learn diagonal covariances (HMM/DyNeMo)

Pull Request - State: closed - Opened by cgohil8 over 1 year ago
Labels: enhancement

#58 - OSL Workshop: Updated Tutorials

Pull Request - State: closed - Opened by cgohil8 over 1 year ago
Labels: documentation, enhancement

#57 - Feat: new connectivity map functions: eigenvector connectivity, spectral re-ordering.

Pull Request - State: closed - Opened by cgohil8 over 1 year ago
Labels: enhancement

#56 - fix: compute threshold with a fixed percentile

Pull Request - State: closed - Opened by scho97 over 1 year ago - 1 comment
Labels: bug

#55 - OSL Workshop

Pull Request - State: closed - Opened by cgohil8 over 1 year ago

#54 - Enhance mode analysis: SMA and plotting matrices

Pull Request - State: closed - Opened by scho97 over 1 year ago
Labels: bug, enhancement

#53 - Fixed bug in CorrelationMatricesLayer and DiagonalMatricesLayer

Pull Request - State: closed - Opened by mlfarinha over 1 year ago

#52 - Possible typos in inference/layers.py

Issue - State: closed - Opened by mlfarinha over 1 year ago - 2 comments
Labels: bug

#51 - Data Object Improvements

Pull Request - State: closed - Opened by cgohil8 almost 2 years ago

#50 - HMM Improvements

Pull Request - State: closed - Opened by cgohil8 almost 2 years ago

#49 - Can you offer an example for input data of the dynemo

Issue - State: closed - Opened by wobunengwang almost 2 years ago - 2 comments

#48 - Feat: Small tweaks and new pairwise Frobenius distance of matrices.

Pull Request - State: closed - Opened by RukuangHuang almost 2 years ago

#47 - Subject embedding model

Pull Request - State: closed - Opened by RukuangHuang almost 2 years ago - 1 comment

#46 - Variable gam is referenced before assignment

Issue - State: closed - Opened by sguthrie almost 2 years ago - 1 comment

#45 - Unreachable code block

Issue - State: closed - Opened by sguthrie almost 2 years ago - 2 comments

#44 - RW may call `self.load_preparation` on inputs of type `np.ndarray`

Issue - State: closed - Opened by sguthrie almost 2 years ago - 2 comments
Labels: bug

#43 - Data fixes

Pull Request - State: closed - Opened by cgohil8 almost 2 years ago

#42 - Unused variable: prepared_data_memmap

Issue - State: closed - Opened by sguthrie almost 2 years ago - 1 comment
Labels: bug

#41 - Parallel static power spectra

Pull Request - State: closed - Opened by cgohil8 almost 2 years ago

#40 - Fixed data dimensions and logit transform in GMM

Pull Request - State: closed - Opened by scho97 almost 2 years ago

#35 - Option to update rho more frequently

Issue - State: closed - Opened by cgohil8 almost 2 years ago
Labels: enhancement

#14 - Replace print statements with a logger

Issue - State: closed - Opened by cgohil8 about 2 years ago
Labels: enhancement

GitHub / OHBA-analysis/osl-dynamics issues and pull requests