Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / OHBA-analysis/osl-dynamics issues and pull requests
#183 - New Fully TensorFlow Implementation of the SE-HMM
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#182 - Counting batches is slow
Issue -
State: closed - Opened by cgohil8 about 1 year ago
- 1 comment
Labels: enhancement
#181 - TFRecord dataset not being updated
Issue -
State: closed - Opened by cgohil8 about 1 year ago
- 1 comment
Labels: bug
#180 - `np.memmap` issues
Issue -
State: closed - Opened by evanr70 about 1 year ago
Labels: bug
#179 - Feat: Learning rate decay.
Pull Request -
State: closed - Opened by RukuangHuang about 1 year ago
#178 - Mean over time rather than sum over time in loss calculation
Issue -
State: closed - Opened by RukuangHuang about 1 year ago
- 3 comments
Labels: enhancement
#177 - Add argument to model.fit for a learning rate decay.
Issue -
State: closed - Opened by cgohil8 about 1 year ago
- 2 comments
Labels: enhancement
#176 - TFRecords raises an error with TensorFlow v2.9.1+
Issue -
State: closed - Opened by cgohil8 about 1 year ago
Labels: bug
#175 - Power normalisation fixes
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#174 - Fix: Importing `tensorflow` package for `Data.dataset` function
Pull Request -
State: closed - Opened by scho97 about 1 year ago
Labels: bug
#173 - Toolbox Paper
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#172 - Buffer size in initialisation methods
Pull Request -
State: closed - Opened by RukuangHuang about 1 year ago
- 4 comments
#171 - Refact/dataset
Pull Request -
State: closed - Opened by RukuangHuang about 1 year ago
- 1 comment
#170 - Separate method to get instantaneous covariances.
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#169 - Reduce flake8 E501 warnings
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#168 - Feature/tf records
Pull Request -
State: closed - Opened by RukuangHuang about 1 year ago
- 1 comment
Labels: enhancement
#167 - Fix/default arguments
Pull Request -
State: closed - Opened by evanr70 about 1 year ago
#166 - Improved Documentation
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#165 - Tutorials
Pull Request -
State: closed - Opened by cgohil8 about 1 year ago
#164 - Use TFRecords rather than Dataset.from_tensor_slices
Issue -
State: closed - Opened by cgohil8 over 1 year ago
Labels: enhancement
#163 - Refact: Scaling factor
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
#162 - Feature/dual_estimation
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#161 - Data class refactor
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
- 1 comment
#160 - Remove observation model modules
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
- 1 comment
#159 - Option to set buffer size for shuffling
Issue -
State: closed - Opened by cgohil8 over 1 year ago
- 1 comment
Labels: enhancement
#158 - Removed OSL_HMM/HMM_MAR
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#157 - Smooth edge effects in inferred alphas
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
- 1 comment
#156 - Fix: reinitialisation bug
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#155 - Remove OSL_HMM/HMM_MAR object
Issue -
State: closed - Opened by cgohil8 over 1 year ago
- 3 comments
#154 - Fix: asymmetric colour bar in power.save
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#153 - Feat: Subject Fine Tuning
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 6 comments
Labels: enhancement
#152 - Config API: Burst Detection Pipeline
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#151 - Dual-estimation method for DyNeMo/HMM
Issue -
State: closed - Opened by RukuangHuang over 1 year ago
- 3 comments
Labels: enhancement
#150 - Updated example scripts for the toolbox paper
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#149 - Feat: plot wavelet transform
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#148 - Feat: BIC.
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 4 comments
#147 - Enhancement: option to get the inferred thetas (rather than alphas)
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 7 comments
#146 - Strange bursting activity around sequence boundaries.
Issue -
State: closed - Opened by evanr70 over 1 year ago
- 7 comments
#145 - Continue next initialisation when KL blows up.
Issue -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
Labels: enhancement
#144 - Fix: Bug in SE-DyNeMo observation model.
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
#143 - Get thetas from DyNeMo
Issue -
State: closed - Opened by evanr70 over 1 year ago
- 5 comments
Labels: enhancement
#142 - Potential bug with random_subset_initialisation in sehmm.
Issue -
State: closed - Opened by RukuangHuang over 1 year ago
- 9 comments
Labels: bug
#141 - Fix variable names in tinda.py
Pull Request -
State: closed - Opened by matsvanes over 1 year ago
- 3 comments
#140 - Tinda examples error out
Issue -
State: closed - Opened by evanr70 over 1 year ago
Labels: bug
#139 - Regularisation on MLP layers
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
Labels: enhancement
#138 - Scaling factor for regularisation and KL loss terms.
Issue -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
Labels: enhancement
#137 - Fix: Subject embeddings no longer part of the generative model of mod…
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#136 - Refactored config API
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#135 - Tinda
Pull Request -
State: closed - Opened by matsvanes over 1 year ago
- 2 comments
Labels: enhancement
#134 - feat: add ability to plot asymmetric maps
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
- 2 comments
#133 - Fix: Prevent in-place operation when rescaling PSD
Pull Request -
State: closed - Opened by scho97 over 1 year ago
- 2 comments
Labels: enhancement
#132 - SE-HMM inherits from HMM
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#131 - SE-HMM can inherit the HMM class
Issue -
State: closed - Opened by cgohil8 over 1 year ago
- 1 comment
#130 - Prevent `NaN` values in mean lifetimes and intervals
Pull Request -
State: closed - Opened by scho97 over 1 year ago
Labels: enhancement
#129 - Fix input dimension errors in fractional occupancy and switching rate computation
Pull Request -
State: closed - Opened by scho97 over 1 year ago
Labels: bug
#128 - Modification of mode analysis to use slices
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#127 - HMM with subject variability
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#126 - Added FAQ
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
Labels: documentation
#125 - Add FAQ to docs
Issue -
State: closed - Opened by cgohil8 over 1 year ago
- 4 comments
Labels: documentation
#124 - Fix: More stable sedynemo and fixed reinitialize function.
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#123 - Add CLI interface for config_api
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#122 - Sedynemo
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#121 - enhance: psd ordering and colormaps in `plot_psd_topo()`
Pull Request -
State: closed - Opened by scho97 over 1 year ago
Labels: enhancement
#120 - Feature/fisher kernel
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
#119 - Fix: plot_alphas bug when axes=None
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#118 - Fix: update to reflect changed History objects
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#117 - Config API: new wrappers and single subject bugs
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#116 - Add detail to logging format
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
- 2 comments
#115 - Bug in single subject pipeline processing
Issue -
State: closed - Opened by evanr70 over 1 year ago
Labels: bug
#114 - feat: github action to check black linting
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#113 - feat: add axis argument to plot_alpha
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#112 - feat: add axis argument to plot_alpha
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#111 - Updated Config API
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#110 - Fixes bug in Data.trim_time_series()
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
- 1 comment
#109 - Statistics module
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#108 - docs: jupyter functions in mod_base + utils/model
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
- 1 comment
#107 - Feature/sliding window power
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#106 - Methods/functions should be documented
Issue -
State: closed - Opened by cgohil8 over 1 year ago
Labels: documentation
#105 - add: close figure window after saving
Pull Request -
State: closed - Opened by scho97 over 1 year ago
- 6 comments
Labels: enhancement
#104 - fix: plot GMM fittings per each mode
Pull Request -
State: closed - Opened by scho97 over 1 year ago
- 2 comments
Labels: enhancement
#103 - pre-commit not used
Issue -
State: closed - Opened by cgohil8 over 1 year ago
#102 - Data.trim_time_series() does not account for data points lost due to the smoothing window applied to amplitude data
Issue -
State: closed - Opened by cgohil8 over 1 year ago
Labels: bug
#101 - feat: function for checking matrix symmetry
Pull Request -
State: closed - Opened by scho97 over 1 year ago
- 3 comments
Labels: enhancement
#100 - Save raw data in Data.save()
Issue -
State: closed - Opened by cgohil8 over 1 year ago
- 2 comments
Labels: enhancement, wontfix
#99 - Feature/multi sub simulation
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#98 - add: return weights for static power spectra
Pull Request -
State: closed - Opened by scho97 over 1 year ago
Labels: enhancement
#97 - feat: tqdm -> tqdm.auto
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#96 - feat: added use_tqdm option for HMM fit
Pull Request -
State: closed - Opened by evanr70 over 1 year ago
#95 - Feature/sedynemo
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#94 - Removed initializer argument from various layers
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#93 - Initializer argument in multiple layers not used
Issue -
State: closed - Opened by cgohil8 over 1 year ago
Labels: enhancement
#92 - Doc: Updated HMM write up.
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#91 - Parcellations + topomap plots in source space
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#90 - Add: Allow returning matplotlib objects when plotting power maps
Pull Request -
State: closed - Opened by scho97 over 1 year ago
- 4 comments
Labels: enhancement
#89 - Bug when resetting model weights.
Issue -
State: closed - Opened by RukuangHuang over 1 year ago
- 3 comments
Labels: bug
#88 - Feat: Method to calculate model evidence in HMM.
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#87 - HMM Free Energy Method + Updated Docs
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#86 - Refactored HMM initialisation methods
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago
#85 - Feat: New attribute for simulated group centroids in multi-subject si…
Pull Request -
State: closed - Opened by RukuangHuang over 1 year ago
#84 - HMM Random State Time Course Initialisation Fix
Pull Request -
State: closed - Opened by cgohil8 over 1 year ago