NuttyLogic/BSBolt issues and pull requests

#156 - Excessive Amount of Bisulfite Ambiguous

Issue - State: open - Opened by pablovargasmejia 3 months ago

#155 - Add the ability to pass -x (feature request)

Issue - State: open - Opened by boconnell89 3 months ago

#154 - Align Error

Issue - State: open - Opened by QianGuoPKU 5 months ago

#153 - condas install BSbolt is missing two different glibc versions

Issue - State: open - Opened by Turckie 11 months ago

#152 - GenotypeMatrix and External not included in packages argument to setup in setup.py

Issue - State: open - Opened by bskubi 11 months ago

#151 - Can the software Bsbolt build the mm10 database?

Issue - State: closed - Opened by heweihuang about 1 year ago - 1 comment

#150 - Error with bsbolt index

Issue - State: open - Opened by martina811 over 1 year ago - 1 comment

#149 - Aligning G2A single read

Issue - State: closed - Opened by boconnell89 over 1 year ago - 2 comments

#148 - Using The CGmap withiout creating the Aggregationmatrix

Issue - State: closed - Opened by olaraym over 1 year ago - 8 comments

#147 - Dev

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#146 - Genotype Matrix

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#145 - Updated documentation

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#144 - MethylDackel support, Output to stdout option

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#143 - Dev

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#142 - MethylDackel support, Output to stdout option

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#141 - Dev

Pull Request - State: closed - Opened by NuttyLogic over 1 year ago

#140 - Simulation Result

Issue - State: closed - Opened by JunxiFeng over 1 year ago - 1 comment

#139 - List of methylated sites from simulated reads

Issue - State: closed - Opened by RenzoTale88 almost 2 years ago - 3 comments

#138 - BSBolt Align err

Issue - State: closed - Opened by PengpengGuan almost 2 years ago - 1 comment

#137 - GenotypeMatrix Addition

Pull Request - State: closed - Opened by aborujerdpur almost 2 years ago

#136 - Write output to stdout [Feature Request]

Issue - State: closed - Opened by boconnell89 about 2 years ago - 1 comment

#135 - conda install of BSBolt issue

Issue - State: closed - Opened by boconnell89 about 2 years ago - 2 comments

#134 - BSBolt Aggregate Matrix error

Issue - State: closed - Opened by Akshaygala over 2 years ago - 1 comment

#133 - Exception in thread Thread-3:

Issue - State: closed - Opened by Akshaygala over 2 years ago - 1 comment

#132 - Alignment for fasta ?

Issue - State: closed - Opened by hmyh1202 over 2 years ago - 1 comment

#131 - [help] How to get Unique alignment reads

Issue - State: closed - Opened by hmyh1202 over 2 years ago - 5 comments

#130 - Prosper

Pull Request - State: closed - Opened by NuttyLogic over 2 years ago

#129 - Prosper

Pull Request - State: closed - Opened by NuttyLogic over 2 years ago

#128 - Mapping to original bottom strand

Issue - State: closed - Opened by SLundregan about 3 years ago - 2 comments
Labels: question

#127 - Could not retrieve index file for .bam

Issue - State: closed - Opened by VitaminBrad about 3 years ago - 3 comments

#126 - Development

Pull Request - State: closed - Opened by NuttyLogic about 3 years ago

#125 - Readme Update

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#124 - Updated conda build

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#123 - Updated conda build

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#122 - Updated conda build

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#121 - - Fixed rare seg fault on certain systems when first mapped base was …

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#120 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#119 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#118 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#117 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#116 - Streaming alignment stats and low mappability fix

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#115 - Alignment stats streaming, mappability bug fix

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#114 - Update Alignment.py

Pull Request - State: closed - Opened by JunxiFeng over 3 years ago

#113 - Updated README

Pull Request - State: closed - Opened by HarryZhang1224 over 3 years ago

#112 - README Updated

Pull Request - State: closed - Opened by HarryZhang1224 over 3 years ago

#111 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#110 - Methylation Calling Max Depth Fix

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#109 - Methylation Calling Max Depth Fix

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#108 - provide intermediate results on mappability

Issue - State: closed - Opened by antonkulaga over 3 years ago - 2 comments

#107 - issues with MeDIP Bs-Seq

Issue - State: closed - Opened by antonkulaga over 3 years ago - 2 comments

#106 - Is there a recommend trimming tool?

Issue - State: closed - Opened by ifishlin over 3 years ago - 1 comment

#105 - - docs update

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#104 - Development

Pull Request - State: closed - Opened by NuttyLogic over 3 years ago

#103 - - fixed ZeroDivisionError when no alignment returned

Pull Request - State: closed - Opened by NuttyLogic almost 4 years ago

#102 - ZeroDivisionError: division by zero

Issue - State: closed - Opened by erskck1 almost 4 years ago - 1 comment

#101 - - added support for bedGraph methylation calls

Pull Request - State: closed - Opened by NuttyLogic almost 4 years ago

#100 - - added support for bedGraph methylation calls

Pull Request - State: closed - Opened by NuttyLogic almost 4 years ago

#99 - - Undirectional Simulation fix

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#98 - - Undirectional Simulation fix

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#97 - Version Bump

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#96 - Sim Bug Fix

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#95 - SE Simulation Methylation Setting Fix

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#94 - Updated compilation

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago

#93 - Development

Pull Request - State: closed - Opened by NuttyLogic about 4 years ago