Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / NeuralEnsemble/elephant issues and pull requests
#647 - Release v1.1.1
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 20 days ago
- 2 comments
#646 - [Fix] neo v0.13.4 deprecated copy
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 25 days ago
- 1 comment
#645 - [ENH] Integrate trials object with Fano factor
Pull Request -
State: open - Opened by Moritz-Alexander-Kern 26 days ago
#644 - [Bug] Deprecation of scipy.sparse.coo_matrix.A in scipy 1.14
Issue -
State: closed - Opened by jo460464 about 1 month ago
- 5 comments
#643 - [ENH] Integrate trials object with Unitary Event Analysis (UE)
Pull Request -
State: open - Opened by Moritz-Alexander-Kern about 1 month ago
- 1 comment
#642 - about maxwell data
Issue -
State: closed - Opened by bxy666666 about 2 months ago
- 1 comment
Labels: question
#641 - [Doc] improve spike_train_generation.spike_extraction parameter documentation
Pull Request -
State: open - Opened by Moritz-Alexander-Kern about 2 months ago
- 1 comment
Labels: documentation
#640 - GPFA update R in M-step, correctly forced diagonal?
Issue -
State: closed - Opened by ybernaerts 4 months ago
- 2 comments
#639 - [ENH] add trials tutorial notebook
Pull Request -
State: open - Opened by Moritz-Alexander-Kern 4 months ago
- 1 comment
#638 - Correcting rounding errors by shifting the affected spikes into the following
Issue -
State: closed - Opened by ybernaerts 4 months ago
- 6 comments
Labels: enhancement
#637 - [ENH] add include_t_stop flag to Synchrotool class, Issue 493
Pull Request -
State: open - Opened by Moritz-Alexander-Kern 4 months ago
- 1 comment
Labels: enhancement
#636 - [Fix] CuBIC, SPADE with scipy 1.14.0, deprecated `.A` attribute in `scipy.sparse` matrices`
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 5 months ago
- 6 comments
#635 - Ruff formatting
Pull Request -
State: open - Opened by github-actions[bot] 5 months ago
#634 - [Fix] Tests for Neo 0.13.1, add same object to list
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 6 months ago
- 1 comment
Labels: bugfix
#633 - [ENH] add caching action for elephant-data
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 7 months ago
- 1 comment
#632 - Fix date in codemeta.json
Pull Request -
State: closed - Opened by apdavison 7 months ago
- 1 comment
Labels: maintenance
#631 - [MAIN] Fix CI runner macOS
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 7 months ago
- 1 comment
#630 - [MAIN] add ruff for autoformatting
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 7 months ago
- 2 comments
#629 - [Main] Bump Version number after release
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 7 months ago
- 1 comment
#628 - Release 1.1.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 7 months ago
- 1 comment
#627 - [Error] List index out of range error during CAD (cell assembly detection) during agglomeration of neuron(s)
Issue -
State: closed - Opened by Idavr 7 months ago
- 5 comments
Labels: bug
#626 - Modify error handling in function spike_contrast (spike_train_synchrony.py)
Pull Request -
State: open - Opened by ManuelCiba 8 months ago
- 6 comments
#625 - [FIX] CI runner for macOS
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 8 months ago
- 1 comment
Labels: bugfix
#624 - [Bug] Outdated mamba version
Issue -
State: closed - Opened by morales-gregorio 8 months ago
Labels: bug
#623 - [Bug] Spike waveform extraction error
Issue -
State: closed - Opened by smalsmal 8 months ago
- 3 comments
Labels: bug
#622 - Add documentation fixes to TSPE
Pull Request -
State: closed - Opened by mdenker 8 months ago
- 2 comments
Labels: documentation
#621 - [Main] Release 1.1.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 8 months ago
- 2 comments
#620 - [Bug] Ineffective alpha-level for SPADE
Issue -
State: closed - Opened by Idavr 8 months ago
- 13 comments
Labels: question
#619 - AttributeError: module 'elephant.asset' has no attribute 'ASSET'
Issue -
State: closed - Opened by taningh86 9 months ago
- 4 comments
Labels: question
#618 - SpikeGLX data
Issue -
State: closed - Opened by taningh86 9 months ago
- 16 comments
Labels: question
#617 - [FIX] failing unitests for neo_tools with Neo 0.13.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 9 months ago
- 3 comments
Labels: Neo related
#616 - [Fix] expired scipy deprecations, sp.sqrt
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 10 months ago
- 2 comments
#615 - [Fix] CI docs runner conda
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 10 months ago
- 1 comment
#614 - [Fix] #613 spike_train_generation module to handle multichannel AnalogSignal inputs
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 10 months ago
- 1 comment
Labels: enhancement
#613 - [Bug] peak_detection without analogsignals.times
Issue -
State: closed - Opened by Samcrl0 10 months ago
- 4 comments
#612 - [Bug fix] Fix bug of synchrotool index out of bounds
Pull Request -
State: closed - Opened by morales-gregorio 11 months ago
- 24 comments
Labels: bugfix
#611 - [MAIN] add Python 3.12
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 11 months ago
- 2 comments
Labels: maintenance
#610 - [ENH] Integrate trials object with GPFA
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern 11 months ago
- 2 comments
#609 - [ENH] add CITATION.cff file
Pull Request -
State: open - Opened by Moritz-Alexander-Kern 12 months ago
- 1 comment
#608 - [ENH] Move to pyproject.toml
Pull Request -
State: open - Opened by Moritz-Alexander-Kern 12 months ago
- 2 comments
Labels: enhancement
#607 - Added a section in the documentation linking to Alpaca.
Pull Request -
State: closed - Opened by mdenker 12 months ago
- 1 comment
Labels: documentation
#606 - [Fix] Update links in codemeta.json for v1.0.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: bugfix
#605 - [Doc] Release Notes with consistent headings
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: documentation
#604 - [ENH] CI: Cancel previous workflows on the same pull request
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 3 comments
Labels: optimization
#603 - Bump version number after Release 1.0.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
#602 - Housekeeping release
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
#601 - Release 1.0.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: maintenance
#600 - bump version number after release
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
#599 - [MAIN] Release 0.14.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
#598 - [MAIN] Fix CI conda runner
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: maintenance
#597 - Generalize cross correlation histogram function
Pull Request -
State: open - Opened by morales-gregorio about 1 year ago
- 5 comments
Labels: enhancement
#596 - [Doc] readthedocs: configuration key build.image is deprecated, changed to build.os
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: build html
#595 - [Fix] skip multitaper unittest for new numpy version 1.26.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: bugfix
#594 - [Enh] add example and handle one-dimensional arrays in CSD.generate lfp
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: documentation, bugfix
#593 - [Fix] Inactive links in asset docs
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: documentation
#592 - [Fix] z score inplace
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
- 1 comment
Labels: bugfix
#591 - [Bug] signal_processing.zscore: Cannot perform inplace operation for np.float 32 and np.float64
Issue -
State: closed - Opened by Moritz-Alexander-Kern about 1 year ago
Labels: bug
#590 - [Feature] Prepare for upcoming changes on RTD
Issue -
State: closed - Opened by mdenker over 1 year ago
- 1 comment
Labels: documentation, breaking-changes
#589 - Fix/dither spike train with numpy>1.23.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 3 comments
Labels: bugfix
#588 - [FIX] add skip test_multitaper_cohere_perfect_cohere for numpy == 1.25.2
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: bugfix
#587 - [MAIN] Fix typos and grammatical errors in GPFA tutorial
Pull Request -
State: closed - Opened by kushaangupta over 1 year ago
- 5 comments
Labels: maintenance
#586 - [Bug] Dither spikes surrogate function raises exception with newer NumPy versions
Issue -
State: closed - Opened by kohlerca over 1 year ago
Labels: bug
#585 - [ENH] Added ASSET class initialization parameter to define the binning rounding error tolerance
Pull Request -
State: closed - Opened by kohlerca over 1 year ago
- 2 comments
Labels: enhancement
#584 - [Bug] Inactive links in ASSET Documentation
Issue -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
Labels: documentation
#583 - Update codemeta.json
Pull Request -
State: closed - Opened by apdavison over 1 year ago
- 1 comment
#582 - [MAIN] update build_wheels action
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: maintenance
#581 - [Bug] Wheels for Python 3.11/3.12 missing from build
Issue -
State: closed - Opened by mdenker over 1 year ago
- 1 comment
Labels: bug
#580 - bump version number after release 0.13.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
#579 - [Feature] Trial handling in Elephant
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 2 comments
Labels: new functionality
#578 - [MAIN] Drop support for numpy 1.22 and Python 3.8 following NEP 29
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 2 comments
Labels: enhancement
#577 - Release 0.13.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: maintenance
#576 - [Fix] cell assembly detection
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: bugfix
#575 - Fixed bug in spade, linked to missing call of min_neu, added test
Pull Request -
State: closed - Opened by pbouss over 1 year ago
- 2 comments
Labels: bugfix
#574 - [Bug] SPADE param min_neu does not work
Issue -
State: closed - Opened by pbouss over 1 year ago
- 3 comments
#573 - [ENH] Use numpy assert array equal in test_multitaper_cohere_perfect_cohere
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: enhancement
#572 - [Fix] Use default tolerances for np.testing.allclose() in WPLI ground truth test
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 2 comments
Labels: bugfix
#571 - [ENH] use warnings with logging in elephant.utils.round_binning_errors
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: enhancement
#570 - [ENH] Improved output messages/status information of ASSET functions
Pull Request -
State: closed - Opened by kohlerca over 1 year ago
- 7 comments
Labels: enhancement
#569 - [Bug] Testing issue: py-elephant (JUSUF, Galileo100)
Issue -
State: open - Opened by Moritz-Alexander-Kern over 1 year ago
- 5 comments
Labels: bug
#568 - [Fix] deprecation warnings numpy 1.25.0
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 2 comments
#567 - Remove annoying warnings
Issue -
State: closed - Opened by morales-gregorio over 1 year ago
- 3 comments
Labels: enhancement
#566 - [doc] add development install of Elephant contributers guide
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: documentation
#565 - Enhance security of actions
Pull Request -
State: closed - Opened by mdenker over 1 year ago
- 1 comment
Labels: enhancement
#564 - [Fix] spike time tiling coefficient for unsorted spiketrains, added validation test
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 3 comments
Labels: bugfix
#563 - Spike time tiling coefficient produces values larger than 1
Issue -
State: closed - Opened by Celine-075 over 1 year ago
- 10 comments
Labels: bug
#562 - A few more changes to codemeta.json
Pull Request -
State: closed - Opened by apdavison over 1 year ago
- 1 comment
#561 - Update codemeta.json to fix download URL
Pull Request -
State: closed - Opened by apdavison over 1 year ago
- 2 comments
Labels: bugfix
#560 - [Feature] Merging "Total spiking probability edges" into elephant
Pull Request -
State: closed - Opened by zottelsheep over 1 year ago
- 18 comments
Labels: new functionality
#559 - [Feature] Merging "Total spiking probability edges" into elephant
Pull Request -
State: closed - Opened by zottelsheep over 1 year ago
#558 - [Doc] Contact info for Elephant maintainers?
Issue -
State: open - Opened by rcpeene over 1 year ago
- 1 comment
Labels: enhancement, question, documentation
#557 - [Feature] Merging "Total spiking probability edges" into elephant
Issue -
State: closed - Opened by zottelsheep over 1 year ago
- 5 comments
Labels: new functionality
#556 - Multitaper psd segmentation
Pull Request -
State: closed - Opened by rjurkus over 1 year ago
- 2 comments
Labels: enhancement
#555 - Best strategy to run Spade on desktop computer
Issue -
State: closed - Opened by chanokin over 1 year ago
- 4 comments
Labels: question
#554 - Fix complexity for binary=False and spread=0
Pull Request -
State: closed - Opened by Kleinjohann over 1 year ago
- 2 comments
Labels: bugfix
#553 - Fix/docstring warnings 2
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 1 comment
Labels: documentation
#552 - [Bug] Creating LFP without generate_lfp?
Issue -
State: open - Opened by rcpeene over 1 year ago
- 2 comments
Labels: bug, documentation
#551 - ENH/ add howfairis badge to README.md
Pull Request -
State: closed - Opened by Moritz-Alexander-Kern over 1 year ago
- 2 comments
Labels: enhancement
#550 - [Bug] ValueError: Number of signals and coords is not same
Issue -
State: open - Opened by rcpeene over 1 year ago
- 1 comment
Labels: bug, documentation
#549 - Added functions to extract time bin and neuron information from SSEs obtained using ASSET
Pull Request -
State: closed - Opened by kohlerca over 1 year ago
- 1 comment
Labels: enhancement
#548 - [Bug] Docs fail to build with provided dependencies and raise weird issues
Issue -
State: closed - Opened by morales-gregorio over 1 year ago
- 1 comment
Labels: bug, documentation