Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / MyersResearchGroup/SeqImprove issues and pull requests

#80 - Some examples added.

Pull Request - State: closed - Opened by wlmtmsm 7 months ago

#79 - Deployment fixes

Pull Request - State: closed - Opened by Duncan-Britt 9 months ago

#78 - added dependency to package.json

Pull Request - State: closed - Opened by Duncan-Britt 9 months ago

#77 - Sequence check

Pull Request - State: closed - Opened by cl117 9 months ago

#76 - Grounding bug fixed by disallowing edits on text annotations.

Pull Request - State: closed - Opened by Duncan-Britt 10 months ago - 1 comment

#74 - Direct upload to SynBioHub(s) and working text annotation links

Pull Request - State: closed - Opened by Duncan-Britt 11 months ago

#73 - From scratch is not working

Issue - State: closed - Opened by cjmyers 11 months ago
Labels: bug

#72 - Editing Display ID removes unchecked sequence annotations.

Issue - State: closed - Opened by Duncan-Britt 12 months ago
Labels: bug

#71 - Display ID is read only outside overview pane.

Pull Request - State: closed - Opened by Duncan-Britt 12 months ago - 1 comment

#70 - Genbank support

Pull Request - State: closed - Opened by Duncan-Britt about 1 year ago

#69 - fixed typo in css

Pull Request - State: closed - Opened by Duncan-Britt about 1 year ago

#68 - Render Visbol Diagrams

Issue - State: open - Opened by Duncan-Britt about 1 year ago
Labels: enhancement

#67 - UI: Make Display ID read only outside of overview page

Issue - State: closed - Opened by Duncan-Britt about 1 year ago - 1 comment

#66 - UI: Create warning if user enters invalid characters into DNA sequence

Issue - State: closed - Opened by Duncan-Britt about 1 year ago - 2 comments
Labels: enhancement

#65 - Improve metadata: Add type support

Issue - State: open - Opened by Duncan-Britt about 1 year ago
Labels: enhancement

#64 - Improve metadata: Add <wasgeneratedby> field

Issue - State: open - Opened by Duncan-Britt about 1 year ago
Labels: enhancement

#63 - Implement direct upload to SynBioHub

Issue - State: closed - Opened by Duncan-Britt about 1 year ago - 2 comments
Labels: enhancement

#62 - Add support for GenBank file upload

Issue - State: closed - Opened by Duncan-Britt about 1 year ago
Labels: enhancement

#61 - Text annotations are incorrectly grounded

Issue - State: closed - Opened by Duncan-Britt about 1 year ago - 1 comment
Labels: bug

#60 - SeqImprove should have regression tests

Issue - State: open - Opened by Duncan-Britt about 1 year ago

#59 - Synbiohub upload feature

Issue - State: closed - Opened by Duncan-Britt about 1 year ago
Labels: duplicate, enhancement

#58 - Render SBOL Visual diagram

Issue - State: closed - Opened by cjmyers about 1 year ago
Labels: duplicate, enhancement

#57 - Booting API server in advance & UI bug fix

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#56 - little bug fix

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#55 - Bug fix

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#54 - Support fasta

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#53 - For large files, sequence pane overflows off screen

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#52 - Anno display part lib

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#51 - Can now select part libraries to annotate against

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#50 - Increase performance

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#49 - Python backend

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#48 - Backend should be rewritten in python from javascript

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#46 - Users shouldn't lose progress if they refresh the page

Issue - State: open - Opened by Duncan-Britt over 1 year ago - 1 comment
Labels: enhancement

#45 - Users should be able to select part libraries from SBH

Issue - State: open - Opened by Duncan-Britt over 1 year ago - 1 comment
Labels: enhancement

#43 - Sequence Annotations are SLOW

Issue - State: closed - Opened by Duncan-Britt over 1 year ago - 1 comment

#42 - Text description edit bug fixes

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#39 - Removing all of the text description causes bug

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#38 - Patch invalid uri bug

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#37 - Create entries from scratch

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#36 - Bug: Backend Crashes when Similar Parts fetch fails

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#35 - Support upload of FASTA documents

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#34 - Create entries from scratch

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago - 1 comment

#33 - Added link to paper

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#32 - Some files wont upload

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#31 - SBOL3

Issue - State: open - Opened by JMante1 over 1 year ago
Labels: enhancement

#30 - Interactions with synbiohub

Issue - State: open - Opened by JMante1 over 1 year ago

#29 - Add seqimprove paper to readme

Issue - State: closed - Opened by JMante1 over 1 year ago

#28 - Create an annotated version of the igem dataset

Issue - State: open - Opened by JMante1 over 1 year ago

#27 - New pipeline for NER and NEN training

Issue - State: open - Opened by JMante1 over 1 year ago
Labels: enhancement

#26 - Extended API timeout

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#25 - API Timeout is too fast

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#24 - Bug fix

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#23 - File from url sticks

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#22 - Created footer with links to github.

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#21 - Site should have footer with links to github, etc...

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#20 - Make sequences editable

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#19 - Handle bad files

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#18 - UI doesn't work on mobile devices.

Issue - State: open - Opened by Duncan-Britt over 1 year ago

#16 - Modified and added instructions about local development in README

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#14 - Added support for overlapping sequence annotations.

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#13 - June 8 fixes

Pull Request - State: closed - Opened by zachsents over 1 year ago

#12 - Site Crashes when file upload fails

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#11 - Test commit June 8 meeting

Pull Request - State: closed - Opened by Duncan-Britt over 1 year ago

#10 - test issue workflow demo

Issue - State: closed - Opened by Duncan-Britt over 1 year ago

#9 - SeqImprove clean download versus same download

Issue - State: open - Opened by JMante1 over 1 year ago - 1 comment
Labels: enhancement

#8 - Changinig annotation grounding leads to refusal to add annotation

Issue - State: closed - Opened by JMante1 over 1 year ago - 1 comment
Labels: bug

#7 - Some files won't upload

Issue - State: closed - Opened by JMante1 over 1 year ago

#6 - Annotations should be added as triples

Issue - State: open - Opened by JMante1 over 1 year ago

#5 - Make adding a new annotation easier

Issue - State: open - Opened by JMante1 over 1 year ago - 2 comments
Labels: enhancement, good first issue

#4 - Collect curator information

Issue - State: open - Opened by JMante1 over 1 year ago
Labels: enhancement

#3 - It is not possible to create entries from scratch

Issue - State: closed - Opened by JMante1 over 1 year ago - 1 comment

#2 - Not possible to edit sequences

Issue - State: closed - Opened by JMante1 over 1 year ago

#1 - File from URL sticks

Issue - State: closed - Opened by JMante1 over 1 year ago - 5 comments