Mouse-Imaging-Centre/pyminc issues and pull requests

#42 - Provide a wheel containing libminc

Issue - State: open - Opened by bcdarwin almost 2 years ago

#41 - Take advantage of MINC_TOOLKIT variable to find library to load

Pull Request - State: closed - Opened by gdevenyi about 2 years ago - 2 comments

#40 - Provide a way to point to libminc shared object

Issue - State: open - Opened by bcdarwin about 2 years ago - 1 comment

#39 - Error when importing pyminc

Issue - State: closed - Opened by koegl over 2 years ago - 7 comments

#38 - exception with malformed minc file doesn't bubble up to show which file is bad

Issue - State: open - Opened by gdevenyi about 3 years ago

#37 - numpy array metadata lost when calling into C, causing unexpected behaviour with non-contiguous ndarrays

Issue - State: closed - Opened by bcdarwin about 3 years ago

#36 - Add volume properties to support compression control

Pull Request - State: open - Opened by gdevenyi over 3 years ago - 3 comments

#35 - `.data` doesn't check `dataLoadable`

Issue - State: open - Opened by bcdarwin almost 4 years ago

#34 - sporadic test failures

Issue - State: closed - Opened by bcdarwin almost 4 years ago - 3 comments

#33 - [feature] add alternate Nibabel-compatible API?

Issue - State: open - Opened by bcdarwin over 4 years ago

#32 - Fix setHyperslab

Issue - State: closed - Opened by d-chagnon over 4 years ago

#31 - Fix inverted logic in label code

Pull Request - State: closed - Opened by gdevenyi almost 5 years ago - 10 comments

#30 - Added functionality for accessing linear transform compoenent of gene…

Pull Request - State: closed - Opened by jgsled over 5 years ago - 1 comment

#29 - drop python2 support ?

Issue - State: closed - Opened by bcdarwin over 6 years ago

#28 - Mincheader lost when using pyminc ?

Issue - State: open - Opened by cpresseau over 6 years ago - 2 comments

#27 - some assertAlmostEqual tests break with newer libs

Issue - State: closed - Opened by bcdarwin almost 7 years ago - 1 comment

#26 - Cannot find libminc2.so

Issue - State: closed - Opened by yohanyee about 7 years ago - 4 comments

#25 - Mac OS Issue

Issue - State: open - Opened by dgmclare over 7 years ago - 9 comments

#24 - Installation instructions for Mac

Issue - State: open - Opened by cfhammill over 7 years ago - 2 comments

#23 - mincException when trying factory.volumeLikeFile with 4D file.

Issue - State: open - Opened by sulantha2006 almost 8 years ago - 5 comments

#22 - Direction cosines not supported ?

Issue - State: closed - Opened by cpresseau about 8 years ago - 2 comments

#21 - add features to deal with xfm (transformation) files

Issue - State: open - Opened by mcvaneede about 8 years ago

#20 - add features to deal with tag files

Issue - State: open - Opened by mcvaneede about 8 years ago

#19 - update the libminc version check

Issue - State: closed - Opened by mcvaneede about 8 years ago - 1 comment

#18 - When do we want traces of pyminc volumes on disk?

Issue - State: closed - Opened by mcvaneede about 8 years ago - 1 comment

#17 - Set the image:complete attribute upon successful file writes

Issue - State: closed - Opened by mcvaneede about 8 years ago

#16 - getVolumeRange fails, maybe on negative values?

Issue - State: closed - Opened by gdevenyi over 8 years ago - 5 comments

#15 - Voxel-wise math returns hyperslabs instead of scalar values

Issue - State: open - Opened by gdevenyi over 8 years ago - 7 comments

#14 - Update datatype read/write flexibility

Issue - State: closed - Opened by mcvaneede about 9 years ago

#13 - Combine functionality from py_minc into pyminc

Issue - State: open - Opened by mcvaneede about 9 years ago - 1 comment

#12 - Allow for float and double files to be written out by pyminc

Issue - State: closed - Opened by mcvaneede almost 10 years ago - 1 comment

#11 - allow files to be written out with compression

Issue - State: open - Opened by mcvaneede about 10 years ago
Labels: enhancement

#10 - pyminc_test2.py fails on weave

Issue - State: open - Opened by mcvaneede about 10 years ago
Labels: bug

#9 - pyminc crashes on files without a history attribute

Issue - State: closed - Opened by mcvaneede over 10 years ago
Labels: bug

#8 - Cryptic output when input data is not MINC 2

Issue - State: closed - Opened by mcvaneede over 10 years ago - 1 comment
Labels: enhancement

#7 - fix getHyperslab and create a function getHyperslabNormalized

Issue - State: open - Opened by mcvaneede over 10 years ago
Labels: bug

#6 - mismatch between volumeType and underlying data

Issue - State: closed - Opened by mcvaneede over 10 years ago
Labels: bug

#5 - Fix for the definition of miget_dimension_sizes.

Pull Request - State: closed - Opened by carlohamalainen over 10 years ago - 3 comments

#4 - document how to use the test script, and make it part of the installation

Issue - State: open - Opened by mcvaneede almost 11 years ago
Labels: enhancement

#3 - Should mincVolume() be called by default? Maybe the file should exist in memory only initially?

Issue - State: closed - Opened by mcvaneede almost 11 years ago - 5 comments
Labels: question

#2 - length of minc history

Issue - State: open - Opened by mcvaneede about 11 years ago
Labels: bug

#1 - allow slice scaling to be turned off

Issue - State: open - Opened by beierman over 11 years ago

GitHub / Mouse-Imaging-Centre/pyminc issues and pull requests