MoseleyBioinformaticsLab/visualizationQualityControl issues and pull requests

#31 - statistical test of left censorship

Issue - State: closed - Opened by rmflight about 2 years ago - 3 comments

#30 - updates main functionality to columnar samples

Pull Request - State: closed - Opened by rmflight about 2 years ago

#28 - reject outliers that are at the top of the distribution

Issue - State: closed - Opened by rmflight over 2 years ago - 2 comments

#27 - Alternative correlation visualization

Issue - State: closed - Opened by rmflight over 3 years ago - 2 comments

#26 - Update quality-control vignette to use ici_kendalltau

Issue - State: closed - Opened by rmflight over 4 years ago - 1 comment

#25 - Mergesort

Pull Request - State: closed - Opened by rmflight almost 5 years ago

#24 - try the direction differences in pure R

Issue - State: closed - Opened by rmflight about 5 years ago - 1 comment

#23 - Rusty kendall matrix

Pull Request - State: closed - Opened by CGMossa over 5 years ago - 11 comments

#22 - `x[i]` should be replaced with `x2[i]`, and so on and so forth

Issue - State: closed - Opened by CGMossa over 5 years ago - 1 comment

#21 - Check results between parallel and sequential versions

Issue - State: closed - Opened by rmflight over 5 years ago

#20 - Sign kt

Pull Request - State: closed - Opened by rmflight over 5 years ago

#19 - Update ici-kendalltau.Rmd

Pull Request - State: closed - Opened by hunter-moseley over 5 years ago

#18 - Added (local) kendall tau

Pull Request - State: closed - Opened by CGMossa over 5 years ago - 6 comments

#17 - Use list of comparisons for correlation splitup

Issue - State: closed - Opened by rmflight over 5 years ago - 1 comment

#16 - switch to ggfortify for PCA

Issue - State: closed - Opened by rmflight almost 9 years ago - 1 comment

#15 - Generate distribution of feature prevalence within and across sample classes

Issue - State: open - Opened by rmflight about 9 years ago

#14 - weight correspondence by feature prevalence

Issue - State: open - Opened by rmflight about 9 years ago

#13 - PCA using the augmented correlation matrix

Issue - State: open - Opened by rmflight about 9 years ago - 5 comments

#12 - option to weight correlation by jaccard metric

Issue - State: closed - Opened by rmflight over 9 years ago - 1 comment

#11 - add option to set NA's to zero automatically

Issue - State: open - Opened by rmflight almost 10 years ago

#10 - generate a warning if there are NA's from pairwise_correlation

Issue - State: open - Opened by rmflight almost 10 years ago

#9 - calculate % of features unique to a sample

Issue - State: open - Opened by rmflight almost 10 years ago - 5 comments

#8 - Add a Gitter chat badge to README.md

Pull Request - State: closed - Opened by gitter-badger about 10 years ago

#7 - combined score from both med_cor and feature_outlier

Issue - State: closed - Opened by rmflight about 10 years ago - 1 comment

#6 - outlier_fraction does not use actual sample ids

Issue - State: closed - Opened by rmflight about 10 years ago

#5 - option to add sample ids to visqc_pca

Issue - State: closed - Opened by rmflight about 10 years ago - 1 comment

#4 - ?outlier_fraction

Issue - State: closed - Opened by jesudk2 about 10 years ago - 2 comments

#3 - Median Correlation Vignette

Issue - State: open - Opened by jesudk2 about 10 years ago - 1 comment

#2 - Vignette Correlation Section issue

Issue - State: closed - Opened by jesudk2 about 10 years ago

#1 - rename filter_nonzero to keep_nonzero