MikeAxtell/CleaveLand4 issues and pull requests

#23 - Suggestion: for establishing transcripts file identity

Issue - State: open - Opened by NDHall about 3 years ago

#22 - GSTAr.pl FAIL after running CleaveLand4

Issue - State: closed - Opened by Re2012r over 3 years ago

#21 - Some clarifications

Issue - State: open - Opened by markcharder over 3 years ago

#20 - Failed to find length of transcript NULL in hash in sub-routine report_dd

Issue - State: closed - Opened by Andhingr almost 4 years ago

#19 - Problems with Tplots

Issue - State: open - Opened by pbaldrich over 4 years ago - 2 comments

#18 - Long ids in fasta query cause issues in GSTAr phase

Issue - State: open - Opened by juancresc over 5 years ago

#17 - Detect alternative slicing sites?

Issue - State: closed - Opened by jonbra over 5 years ago - 2 comments

#16 - Problem with large degradomes

Issue - State: open - Opened by juancresc over 5 years ago - 1 comment

#15 - ABORT: Failed to find length of transcript NULL in hash in sub-routine report_dd

Issue - State: closed - Opened by juancresc over 5 years ago - 1 comment

#14 - Update CleaveLand4.pl

Pull Request - State: open - Opened by AIRibone almost 6 years ago

#13 - CleaveLand 4.4 - Bowtie dependency problem

Issue - State: closed - Opened by adbsd over 6 years ago - 1 comment
Labels: bug

#12 - Biological replicates handeling

Issue - State: closed - Opened by arazit over 6 years ago - 5 comments
Labels: question

#11 - Incompatibility with newer samtools?

Issue - State: open - Opened by MikeAxtell over 6 years ago
Labels: bug

#10 - Cleaveland4 output results filtration

Issue - State: closed - Opened by sebel76 almost 7 years ago - 1 comment
Labels: question

#9 - Install Math::CDF

Issue - State: closed - Opened by sebel76 about 7 years ago - 2 comments
Labels: question

#8 - Error of "check bowtie version"

Issue - State: closed - Opened by a92932000 about 7 years ago - 1 comment
Labels: bug

#7 - UTR will be better than Transcriptome?

Issue - State: closed - Opened by wangyugui about 7 years ago

#6 - Same input, different outputs

Issue - State: closed - Opened by juancresc over 7 years ago - 2 comments

#5 - Transcriptome has to be the same for the degradome density file

Issue - State: closed - Opened by juancresc over 7 years ago - 3 comments

#4 - Parallel computing

Issue - State: open - Opened by netbofia over 8 years ago - 6 comments
Labels: enhancement

#3 - Error in creating bam

Issue - State: closed - Opened by a92932000 over 8 years ago - 1 comment
Labels: bug

#2 - Add capability of assessing both strands of query set and genome-wide analysis

Issue - State: open - Opened by MikeAxtell over 10 years ago

#1 - Add options to use other target-aligners besides GSTAr - for speed

Issue - State: open - Opened by MikeAxtell over 10 years ago
Labels: enhancement

Ecosyste.ms: Issues

GitHub / MikeAxtell/CleaveLand4 issues and pull requests