Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / MannLabs/alphapept issues and pull requests

#565 - default_settings.yaml

Issue - State: open - Opened by davidhoover 20 days ago - 1 comment

#564 - launching AlphaPept GUI failed

Issue - State: open - Opened by Chuanping-Zhao 22 days ago

#563 - KeyError: 'Modified.Sequence'

Issue - State: closed - Opened by yanzhou-boy about 1 month ago - 1 comment

#562 - Process hangs when using a Bruker's .d file

Issue - State: open - Opened by kenll99minecart 3 months ago

#561 - 'numpy.typing' has no attribute 'NDArray'

Issue - State: closed - Opened by AUldry 3 months ago - 3 comments

#558 - Not enough disk space for analysis. Linux

Issue - State: closed - Opened by msproteomics 6 months ago

#556 - Task failed

Issue - State: open - Opened by cksakura 10 months ago - 6 comments

#555 - A question about guide

Issue - State: closed - Opened by lnelllwj 10 months ago - 2 comments

#551 - Notebooks

Pull Request - State: closed - Opened by straussmaximilian about 1 year ago - 1 comment

#550 - Develop

Pull Request - State: closed - Opened by straussmaximilian about 1 year ago - 1 comment

#548 - Develop 0.5.0

Pull Request - State: closed - Opened by straussmaximilian over 1 year ago - 2 comments

#547 - Failure to convert Thermo Ascend files

Issue - State: open - Opened by im281 over 1 year ago - 1 comment

#545 - cannot install pythonnet 2.5.2 in linux

Issue - State: closed - Opened by grandrea over 1 year ago - 1 comment

#544 - Search fails on mzML files?

Issue - State: open - Opened by lazear over 1 year ago - 2 comments

#541 - Bump pyinstaller from 5.2 to 5.8.0

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago - 1 comment

#540 - Docker

Pull Request - State: closed - Opened by straussmaximilian over 1 year ago - 1 comment

#539 - Bump numpy from 1.20.3 to 1.24.2

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago - 1 comment

#538 - Docker

Pull Request - State: closed - Opened by straussmaximilian over 1 year ago - 1 comment

#537 - Bump pandas from 1.4.3 to 1.5.3

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago - 1 comment

#536 - Support for python 3.10

Issue - State: open - Opened by RobbinBouwmeester over 1 year ago

#535 - pythonnet=3 works

Pull Request - State: closed - Opened by jalew188 over 1 year ago - 1 comment

#534 - semi-tryptic? (help wanted)

Issue - State: closed - Opened by yc386 over 1 year ago - 4 comments

#533 - Trying GUI version produces error regarding protobuf

Issue - State: open - Opened by gsaxena888 over 1 year ago - 3 comments

#532 - Bump numpy from 1.20.3 to 1.24.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments

#531 - Bump tables from 3.6.1 to 3.8.0

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago - 1 comment

#530 - Develop

Pull Request - State: closed - Opened by straussmaximilian almost 2 years ago - 1 comment

#529 - Update develop

Pull Request - State: closed - Opened by straussmaximilian almost 2 years ago

#527 - Bump numpy from 1.20.3 to 1.24.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#526 - Bump pyinstaller from 5.2 to 5.7.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#523 - Bump pandas from 1.4.3 to 1.5.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#522 - Bump numpy from 1.20.3 to 1.23.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#521 - Bump pyinstaller from 5.2 to 5.6.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#520 - Bump numba from 0.55.2 to 0.56.4

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago - 1 comment

#519 - FIX nbdev

Pull Request - State: closed - Opened by straussmaximilian almost 2 years ago - 1 comment

#518 - Develop

Pull Request - State: closed - Opened by straussmaximilian almost 2 years ago - 1 comment

#517 - Bump pyinstaller from 5.2 to 5.6.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#516 - Bump pyinstaller from 5.2 to 5.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#515 - Bump pandas from 1.4.3 to 1.5.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#514 - Bump numba from 0.55.2 to 0.56.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#511 - Bump numpy from 1.20.3 to 1.23.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 3 comments

#510 - Bump matplotlib from 3.5.2 to 3.6.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments

#509 - Update streamlit requirement from <=1.10.0 to <1.14.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#508 - Bump matplotlib from 3.5.2 to 3.6.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#507 - Bump matplotlib from 3.5.2 to 3.5.3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#506 - Bump scikit-learn from 1.1.1 to 1.1.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#505 - Update streamlit requirement from <=1.10.0 to <1.13.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#504 - Bump fastcore from 1.5.6 to 1.5.26

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#503 - Bump numpy from 1.20.3 to 1.23.3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 3 comments

#502 - Bump fastcore from 1.5.6 to 1.5.24

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#501 - FASTA downloader broken

Issue - State: closed - Opened by straussmaximilian about 2 years ago

#500 - Bump fastcore from 1.5.6 to 1.5.22

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#499 - Bump networkx from 2.8.4 to 2.8.6

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#498 - Bump pyteomics from 4.5.3 to 4.5.5

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#497 - Bump fastcore from 1.5.6 to 1.5.21

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#494 - Develop

Pull Request - State: closed - Opened by straussmaximilian about 2 years ago - 1 comment

#493 - streamlit upgrade breaks gui

Issue - State: closed - Opened by straussmaximilian about 2 years ago - 1 comment

#492 - Bump fastcore from 1.5.6 to 1.5.17

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#491 - Bump numpy from 1.20.3 to 1.23.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#490 - nbdev upgrade breaks CI

Issue - State: closed - Opened by mschwoer about 2 years ago - 1 comment

#489 - #488: fix error when scoring on machines with more than 60 cpus

Pull Request - State: closed - Opened by mschwoer about 2 years ago - 1 comment

#488 - Still problems with processing of single timsTOF files

Issue - State: closed - Opened by mschwoer about 2 years ago - 2 comments

#487 - Bump fastcore from 1.5.6 to 1.5.16

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#486 - Bump fastcore from 1.5.6 to 1.5.11

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#485 - MS1_scans and MS2_scans in .ms_data.hdf don't retain scan structure

Issue - State: closed - Opened by tommasomari about 2 years ago - 2 comments

#484 - fix link to column header documentation

Pull Request - State: closed - Opened by elena-krismer about 2 years ago

#483 - Bump pyteomics from 4.5.3 to 4.5.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#482 - Bump networkx from 2.8.4 to 2.8.5

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#481 - Bump fastcore from 1.5.6 to 1.5.8

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#479 - Update Develop

Pull Request - State: closed - Opened by straussmaximilian about 2 years ago

#478 - Develop

Pull Request - State: closed - Opened by straussmaximilian about 2 years ago - 1 comment

#477 - Bump fastcore from 1.5.4 to 1.5.6

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#476 - Bump networkx from 2.8.3 to 2.8.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#475 - Bump pyinstaller from 5.1 to 5.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#474 - Bump fastcore from 1.4.2 to 1.5.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#473 - Bump psutil from 5.9.0 to 5.9.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment

#472 - Bump numpy from 1.20.3 to 1.23.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 2 comments

#471 - Bump numpy from 1.20.3 to 1.23.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments

#470 - Bump pandas from 1.4.2 to 1.4.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#469 - Bump sqlalchemy from 1.4.37 to 1.4.39

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#468 - Bump sqlalchemy from 1.4.36 to 1.4.37

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#467 - Bump watchdog from 2.1.7 to 2.1.9

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#466 - Bump h5py from 3.6.0 to 3.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#465 - Macbook crash fix

Pull Request - State: closed - Opened by swillems over 2 years ago

#464 - FEAT: create headless option

Pull Request - State: closed - Opened by swillems over 2 years ago - 2 comments

#463 - Issues with double modifications

Issue - State: open - Opened by straussmaximilian over 2 years ago

#462 - Bump scipy from 1.8.0 to 1.8.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#461 - Bump numba from 0.55.1 to 0.55.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#459 - Breaking changes in output files, e.g., column names

Issue - State: closed - Opened by felixriese over 2 years ago - 4 comments

#458 - Bump scikit-learn from 1.0.2 to 1.1.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#457 - Bump networkx from 2.8 to 2.8.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#452 - Bump numpy from 1.20.3 to 1.22.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments

#449 - AlphaPept CLI process hangs on error waiting for user input

Issue - State: closed - Opened by SecretLake over 2 years ago - 3 comments

#446 - Bump matplotlib from 3.5.1 to 3.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment

#442 - Can't abort runs in 0.4.5.

Issue - State: closed - Opened by straussmaximilian over 2 years ago - 1 comment

#440 - Bump tables from 3.6.1 to 3.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments

#400 - Export PCA and other figures in vector graphic

Issue - State: closed - Opened by treitpeter over 2 years ago - 1 comment