Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ML-Bioinfo-CEITEC/genomic_benchmarks issues and pull requests

#40 - d

Issue - State: open - Opened by MsAlEhR 25 days ago

#39 - Datasets not found

Issue - State: open - Opened by icyjayd 9 months ago

#38 - download_dataset doesn't work as expected on my CHPC system.

Issue - State: open - Opened by leannmlindsey 11 months ago - 1 comment

#37 - Enhancers_cohn labels incorrect?

Issue - State: open - Opened by exnx almost 2 years ago

#36 - Leaderboard

Issue - State: open - Opened by exnx almost 2 years ago

#35 - Is there a way to set the download path?

Issue - State: closed - Opened by exnx almost 2 years ago - 1 comment

#34 - Longer intervals?

Issue - State: open - Opened by exnx almost 2 years ago

#33 - Adding option to show detailed description in info

Pull Request - State: closed - Opened by katarinagresova almost 2 years ago

#32 - masked DNA strings

Issue - State: open - Opened by kchu25 over 2 years ago - 1 comment

#31 - cloud cache False by default

Pull Request - State: closed - Opened by katarinagresova over 2 years ago

#30 - Drosophila enhancers

Pull Request - State: closed - Opened by katarinagresova over 2 years ago

#29 - Permission Error on HumanOrWorm Dataset

Issue - State: open - Opened by tomginsberg over 2 years ago - 4 comments

#28 - Human ensembl reg multiclass

Pull Request - State: closed - Opened by katarinagresova over 2 years ago

#27 - PyTorch model support for multiclass datasets

Pull Request - State: closed - Opened by davidcechak over 2 years ago - 1 comment

#26 - cloud_cache is not working

Issue - State: closed - Opened by katarinagresova over 2 years ago - 1 comment

#25 - Datasets cleanup

Pull Request - State: closed - Opened by katarinagresova over 2 years ago

#23 - Download of HumanEnhancersEnsembl (PyTorch) dataset is not working

Issue - State: closed - Opened by JakRys almost 3 years ago - 1 comment

#22 - renaming dataset to demo

Pull Request - State: closed - Opened by katarinagresova almost 3 years ago

#21 - Human ensembl regulatory

Pull Request - State: closed - Opened by katarinagresova almost 3 years ago - 3 comments

#20 - What metric should we use?

Issue - State: closed - Opened by simecek about 3 years ago

#19 - More diverse datasets needed

Issue - State: closed - Opened by simecek about 3 years ago
Labels: enhancement

#18 - Info on full-set dataset

Issue - State: closed - Opened by simecek about 3 years ago
Labels: enhancement

#17 - Filtering for a possible data leakage

Issue - State: closed - Opened by simecek about 3 years ago
Labels: enhancement

#16 - Add a possibility to a custom dataset

Issue - State: closed - Opened by simecek about 3 years ago
Labels: enhancement

#15 - Add explicit numericalization of labels

Issue - State: closed - Opened by MartinekV about 3 years ago - 1 comment
Labels: enhancement

#14 - Add validation of downloaded files

Issue - State: closed - Opened by MartinekV about 3 years ago
Labels: enhancement

#13 - Force download doesn't work for pytorch datasets

Issue - State: closed - Opened by MartinekV about 3 years ago

#12 - pip install tensor flow>=2.6.0

Pull Request - State: closed - Opened by Shirapti-nath about 3 years ago - 1 comment

#11 - The package emoji is not performing bench

Issue - State: closed - Opened by MartinekV over 3 years ago - 1 comment
Labels: documentation, good first issue, help wanted

#10 - Human promoters ensembl regulatory dataset

Pull Request - State: closed - Opened by katarinagresova over 3 years ago

#9 - Human promoter flanking region from Ensembl regulatory build dataset

Pull Request - State: closed - Opened by katarinagresova over 3 years ago - 6 comments

#8 - Human ochr ensembl regulatory dataset

Pull Request - State: closed - Opened by katarinagresova over 3 years ago - 4 comments

#7 - Human enhancers ensembl regulatory dataset

Pull Request - State: closed - Opened by katarinagresova over 3 years ago - 2 comments

#6 - Human tss ensembl dataset

Pull Request - State: closed - Opened by katarinagresova over 3 years ago

#5 - Submission of human_enhancers_cohn dataset

Pull Request - State: closed - Opened by simecek over 3 years ago - 1 comment

#4 - Submission of human or worm demo dataset

Pull Request - State: closed - Opened by simecek over 3 years ago

#3 - Human enhancers

Pull Request - State: closed - Opened by simecek over 3 years ago - 1 comment

#2 - Human nontata promoters

Pull Request - State: closed - Opened by simecek over 3 years ago - 2 comments

#1 - Adding setup.py to main branch

Pull Request - State: closed - Opened by simecek over 3 years ago