MKoesters/SMITER issues and pull requests

#50 - Bump wheel from 0.33.6 to 0.38.1

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#49 - Bump numpy from 1.18.1 to 1.22.0

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#48 - Bump pip from 19.2.3 to 21.1

Pull Request - State: open - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#47 - improve CI

Pull Request - State: open - Opened by MKoesters almost 4 years ago

#46 - Feature/readme

Pull Request - State: closed - Opened by JB-MS almost 4 years ago

#45 - Implement LipidCreator for fragmenting lipids

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#44 - Feature/dynamic exclusion

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#43 - implement parameter for max intensity

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#42 - Implement lipid fragmentation class

Issue - State: closed - Opened by MKoesters almost 4 years ago

#41 - Implement dynamic exclusion parameter

Issue - State: closed - Opened by MKoesters almost 4 years ago

#40 - Implement parameter to change upper/lower detection limit

Issue - State: closed - Opened by MKoesters almost 4 years ago

#39 - Update master with newest changes

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#38 - Feature/jamss noise

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#37 - Feature/ppm shift noise

Pull Request - State: closed - Opened by MKoesters almost 4 years ago

#36 - Allow specification of pyQms parameters

Issue - State: open - Opened by MKoesters about 4 years ago
Labels: enhancement

#35 - [WIP] Feature/jamss noise

Pull Request - State: closed - Opened by MKoesters about 4 years ago

#34 - Update synthetic_mzml.py

Pull Request - State: closed - Opened by MKoesters about 4 years ago

#33 - Example script to filter and write mzML files

Pull Request - State: closed - Opened by JB-MS over 4 years ago

#32 - Change peak properties to be based on molecule names

Pull Request - State: closed - Opened by MKoesters over 4 years ago - 1 comment

#31 - generate fragments of all molecues in isolation and elution window

Pull Request - State: closed - Opened by MKoesters over 4 years ago - 1 comment

#30 - Create main.yml

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#29 - fix example_scripts

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#28 - Write small summary of molecules

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#27 - New example script

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#26 - Noise injection in ms2

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#25 - Implement logging

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#24 - Fix example scripts

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#23 - Feature: Output csv file with simulated molecules

Issue - State: closed - Opened by MKoesters almost 5 years ago

#22 - Write ions in profile mode

Issue - State: open - Opened by MKoesters almost 5 years ago
Labels: enhancement

#21 - Feature/noise api

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#20 - Feature/noise api

Pull Request - State: closed - Opened by MKoesters almost 5 years ago

#19 - Feature: Implement Exponentially modified Gaussian distribution

Issue - State: closed - Opened by MKoesters almost 5 years ago

#18 - introduce parameter checking

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#17 - Feature/coverage

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#16 - Support for writing peptides

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 2 comments

#15 - chromatogram count is None

Issue - State: closed - Opened by JB-MS almost 5 years ago - 1 comment

#14 - Write Chromatogram

Pull Request - State: closed - Opened by MKoesters almost 5 years ago

#13 - Fix for writing precursor information

Pull Request - State: closed - Opened by MKoesters almost 5 years ago - 1 comment

#12 - Missing precursor information

Issue - State: closed - Opened by JB-MS almost 5 years ago

#11 - Feature/top n fragments

Pull Request - State: closed - Opened by MKoesters almost 5 years ago

#10 - empty spectra are not written

Issue - State: closed - Opened by JB-MS almost 5 years ago - 1 comment
Labels: bug

#9 - Implement chromatogram

Issue - State: closed - Opened by JB-MS almost 5 years ago

#8 - Implement proper default parameters

Issue - State: closed - Opened by MKoesters almost 5 years ago

#7 - Write MS2 scans for each precursor in MS1, sorted by precursor intensity

Issue - State: closed - Opened by MKoesters almost 5 years ago

#6 - Rescaling MS2 scans

Issue - State: closed - Opened by MKoesters almost 5 years ago
Labels: enhancement

#5 - Implement API for noise injection

Issue - State: closed - Opened by MKoesters almost 5 years ago

#4 - add peak_scaling_factor parameter

Pull Request - State: closed - Opened by MKoesters almost 5 years ago

#3 - example script for two overlapping peaks

Pull Request - State: closed - Opened by MKoesters almost 5 years ago

#2 - Feature/add base peak to scans

Pull Request - State: closed - Opened by JB-MS almost 5 years ago

#1 - Added example script for plotting simulated chromatogram

Pull Request - State: closed - Opened by JB-MS almost 5 years ago
Labels: enhancement

GitHub / MKoesters/SMITER issues and pull requests