MIPLabCH/nigsp issues and pull requests

#117 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago - 1 comment
Labels: Internal

#116 - don't update pre-commit versions too often

Pull Request - State: closed - Opened by mscheltienne 3 months ago
Labels: Internal

#115 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago
Labels: Internal

#114 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago
Labels: Internal

#113 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago
Labels: Internal

#112 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago
Labels: Internal

#111 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago
Labels: Internal

#110 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago
Labels: Internal

#109 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago
Labels: Internal

#108 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago
Labels: Testing, Internal

#107 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago
Labels: Internal

#106 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago
Labels: Internal

#105 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago
Labels: Internal

#104 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago
Labels: Internal

#103 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago
Labels: Internal

#102 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago
Labels: Internal

#101 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago
Labels: Documentation, Internal

#100 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago
Labels: Internal

#99 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago
Labels: Internal

#98 - Use intersphinx registry to build website

Pull Request - State: closed - Opened by mscheltienne 7 months ago
Labels: Documentation, Internal

#97 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago
Labels: Internal

#96 - Switch formatter from Black to Blue?

Issue - State: open - Opened by smoia 7 months ago - 2 comments
Labels: Enhancement, Internal

#95 - Replace black and flake8 by ruff

Pull Request - State: closed - Opened by mscheltienne 7 months ago - 3 comments
Labels: Testing, Internal

#94 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago - 1 comment
Labels: Internal

#93 - Add auto PR labeler

Pull Request - State: closed - Opened by mscheltienne 7 months ago - 3 comments
Labels: Internal, Released

#92 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago - 2 comments

#91 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago - 1 comment

#90 - Replace fetch_file with a proper 'dataset' module using pooch

Issue - State: open - Opened by mscheltienne 8 months ago - 1 comment
Labels: Testing

#89 - Numpy 2.0 + scipy + matplotlib pre-release workflow

Pull Request - State: closed - Opened by mscheltienne 8 months ago - 12 comments
Labels: Documentation, Minormod-breaking, Testing, Internal

#88 - Test against numpy 2.0

Issue - State: closed - Opened by mscheltienne 9 months ago

#87 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 11 months ago - 1 comment
Labels: Internal

#86 - Fix versioneer for python >= 3.12

Pull Request - State: closed - Opened by mscheltienne 11 months ago - 4 comments
Labels: Internal

#85 - Bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: Internal

#84 - update upstream path contributors file

Pull Request - State: closed - Opened by merelvdthiel 12 months ago - 2 comments
Labels: Released

#83 - Implement loguru for better logging (or find a way to catch errors in loggers)

Issue - State: open - Opened by smoia about 1 year ago
Labels: Enhancement

#82 - Fix laplacian and degree shape check in `laplacian.normalisation`

Pull Request - State: closed - Opened by smoia about 1 year ago - 2 comments
Labels: BugFIX, Released

#81 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 1 comment
Labels: Internal

#80 - Fix documentation build and API

Pull Request - State: closed - Opened by smoia about 1 year ago - 1 comment
Labels: Documentation, hacktoberfest-accepted

#79 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 1 comment
Labels: Internal

#78 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: Internal, Released

#77 - moving to pydra workflow

Pull Request - State: open - Opened by domguia about 1 year ago
Labels: Minormod-breaking

#76 - Setting some guidelines for testing

Issue - State: open - Opened by hugofluhr about 1 year ago - 2 comments
Labels: Documentation, Discussion

#75 - Twitter Handle for NiGSP

Issue - State: closed - Opened by venkateshness about 1 year ago
Labels: Discussion

#74 - Stats tests between conditions

Issue - State: open - Opened by venkateshness about 1 year ago - 1 comment
Labels: Enhancement

#73 - Statistical Model for SDI - first level and second level

Pull Request - State: open - Opened by venkateshness about 1 year ago - 8 comments
Labels: Minormod

#72 - Add smoothness metric

Pull Request - State: open - Opened by hugofluhr over 1 year ago - 7 comments
Labels: Minormod

#71 - add computation of smoothness for graph signals

Issue - State: open - Opened by hugofluhr over 1 year ago - 2 comments
Labels: Enhancement

#70 - Add Furo theme to the documentation build

Pull Request - State: closed - Opened by mscheltienne over 1 year ago - 12 comments
Labels: Documentation

#69 - Use assert_allclose from numpy.testing instead of np.allclose in matrix comparison tests

Pull Request - State: closed - Opened by mscheltienne over 1 year ago - 2 comments
Labels: Testing

#68 - A nice website theme

Issue - State: closed - Opened by mscheltienne over 1 year ago - 2 comments

#67 - Fix computation of degree matrix (from normal matrix to its adjacency)

Pull Request - State: closed - Opened by smoia over 1 year ago - 4 comments
Labels: BugFIX, Released

#66 - Statistical Model for SDI - first level and second level

Issue - State: open - Opened by venkateshness over 1 year ago
Labels: Enhancement

#65 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment
Labels: Internal

#64 - Add settings to consider self-loops when computing Laplacians

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Minormod

#63 - Plots improvements

Pull Request - State: open - Opened by smoia over 1 year ago
Labels: Minormod

#62 - Update contributions

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Documentation, Released

#61 - Attempt to fix the auto release error

Pull Request - State: closed - Opened by smoia over 1 year ago
Labels: Internal

#60 - Add codespell to code checks

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Internal

#59 - Add possibility of manual run

Pull Request - State: closed - Opened by smoia over 1 year ago
Labels: Invalid, Internal

#58 - int: update CI/CD Ubuntu version

Pull Request - State: closed - Opened by smoia over 1 year ago
Labels: Internal

#57 - Improve extension handling, and make `.tsv.gz` the default extension

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Minormod-breaking, Released

#56 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment
Labels: Internal

#55 - Add map of filetypes to related loading functions for matricial data (`io.LOADMAT_DICT`)

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Minormod, Released

#54 - Add outflow random walk normalisation (and specify former random walk as inflow random walk)

Pull Request - State: closed - Opened by smoia over 1 year ago - 1 comment
Labels: Minormod

#53 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#52 - Add logo folder with guidelines, eps and png files

Pull Request - State: closed - Opened by NawalK almost 2 years ago - 1 comment
Labels: Documentation

#51 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#50 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#49 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#48 - Adjust `io.load_nifti_get_mask` to expect 4 dimensions in timeseries and 3 in masks by default

Pull Request - State: closed - Opened by smoia almost 2 years ago - 2 comments
Labels: Minormod, Released

#47 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#46 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#45 - Bump actions/setup-python from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: Internal

#44 - Bump actions/checkout from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: Internal

#43 - Add timeseries resizing methods and improve colorbar plotting options

Pull Request - State: closed - Opened by smoia almost 2 years ago - 2 comments
Labels: Minormod, Released

#42 - Add dependabot config to keep GitHub actions up-to date

Pull Request - State: closed - Opened by mscheltienne almost 2 years ago - 5 comments
Labels: Released

#41 - Syncronise required packages versions and add DS_Store to .gitignore

Pull Request - State: closed - Opened by mscheltienne almost 2 years ago - 2 comments
Labels: Released

#40 - [MNT] Requirements and version pins

Issue - State: closed - Opened by mscheltienne almost 2 years ago - 1 comment
Labels: Bug, Released

#39 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment
Labels: Internal

#38 - Add automatic docker container release

Pull Request - State: closed - Opened by smoia almost 2 years ago - 1 comment
Labels: Internal

#37 - Fix initialisation (remove test packages)

Pull Request - State: closed - Opened by smoia almost 2 years ago - 2 comments
Labels: BugFIX, Released

#36 - Add laplacian computation and normalisation independent functions

Pull Request - State: closed - Opened by smoia almost 2 years ago - 2 comments
Labels: Minormod-breaking, Released

#35 - Add edges vs nodes plotting, improve plotting in general

Pull Request - State: closed - Opened by smoia almost 2 years ago - 2 comments
Labels: Minormod, Released

#34 - Add function to recompose laplacian from eigenvalues and eigenvectors

Pull Request - State: closed - Opened by smoia almost 2 years ago - 1 comment
Labels: Minormod, Released

#33 - Remove auto restyling in tests and PR merges given pre-commit

Pull Request - State: closed - Opened by smoia about 2 years ago - 2 comments
Labels: Released

#32 - Fix diagonal matrix check in `operations.laplacian.symmetric_normalisation`

Pull Request - State: closed - Opened by smoia about 2 years ago - 1 comment
Labels: BugFIX, Released

#31 - Add isort, flake8, pydocstyle, and rst pre-coomit hooks (and dev dependencies)

Pull Request - State: closed - Opened by smoia about 2 years ago - 1 comment
Labels: Internal, Released

#30 - Add pre-commit to repository

Pull Request - State: closed - Opened by smoia about 2 years ago - 1 comment
Labels: Internal, Released

#29 - Add possibility (1) to specify which diagonal to use for matrices symmetric normalisation and (2) to avoid "0" elements in the diagonal

Pull Request - State: closed - Opened by smoia about 2 years ago - 1 comment
Labels: Minormod, Released

GitHub / MIPLabCH/nigsp issues and pull requests