Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / ME-ICA/tedana issues and pull requests
#1169 - Update numpy requirement from <=2.2.1,>=1.16 to >=1.16,<=2.2.2
Pull Request -
State: closed - Opened by dependabot[bot] 23 days ago
Labels: maintenance, ignore-for-release
#1168 - No BOLD components detected error
Issue -
State: open - Opened by cjl2007 24 days ago
- 18 comments
Labels: user-feedback, EPTI
#1167 - January 2025 Developers Call
Issue -
State: open - Opened by handwerkerd 27 days ago
Labels: discussion, community
#1166 - Add option to overwrite file (and write out extra files with "verbose") in T2smap workflow
Pull Request -
State: closed - Opened by smoia 28 days ago
- 3 comments
Labels: bug
#1165 - Update scipy requirement from <=1.15.0,>=1.2.0 to >=1.2.0,<=1.15.1
Pull Request -
State: closed - Opened by dependabot[bot] 30 days ago
- 4 comments
Labels: maintenance, ignore-for-release
#1164 - Update scikit-learn requirement from <=1.6.0,>=0.21 to >=0.21,<=1.6.1
Pull Request -
State: closed - Opened by dependabot[bot] 30 days ago
Labels: maintenance, ignore-for-release
#1163 - Back-fill, then forward-fill, NaNs in external regressors
Pull Request -
State: closed - Opened by tsalo about 1 month ago
- 3 comments
Labels: bug
#1162 - Update scipy requirement from <=1.14.1,>=1.2.0 to >=1.2.0,<=1.15.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 month ago
Labels: maintenance, ignore-for-release
#1161 - Update nilearn requirement from <=0.11.0,>=0.10.3 to >=0.10.3,<=0.11.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1160 - Update numpy requirement from <=2.1.3,>=1.16 to >=1.16,<=2.2.1
Pull Request -
State: closed - Opened by dependabot[bot] about 2 months ago
Labels: maintenance, ignore-for-release
#1159 - December 2024 Developers call
Issue -
State: closed - Opened by handwerkerd about 2 months ago
- 4 comments
Labels: discussion, community
#1158 - Update scikit-learn requirement from <=1.5.2,>=0.21 to >=0.21,<=1.6.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
- 2 comments
Labels: maintenance, ignore-for-release
#1157 - Update bokeh requirement from <=3.6.1,>=1.0.0 to >=1.0.0,<=3.6.2
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
Labels: maintenance, ignore-for-release
#1156 - Update numpy requirement from <=2.1.3,>=1.16 to >=1.16,<=2.2.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1155 - Update nilearn requirement from <=0.10.4,>=0.10.3 to >=0.10.3,<=0.11.0
Pull Request -
State: closed - Opened by dependabot[bot] 2 months ago
#1154 - Enforce equal figure widths in HTML report and make them adjustable by window size
Pull Request -
State: closed - Opened by eurunuela 3 months ago
#1153 - Show interactive plot of Robust ICA clusters in the HTML reports
Pull Request -
State: open - Opened by eurunuela 3 months ago
- 2 comments
Labels: reports
#1152 - External regressors with NaNs will crash decision tree
Issue -
State: closed - Opened by tsalo 3 months ago
Labels: bug
#1151 - Add a function to check if TE values are in ms, otherwise update them
Pull Request -
State: closed - Opened by eurunuela 3 months ago
- 1 comment
#1150 - Add sanity check for echo times
Issue -
State: closed - Opened by tsalo 3 months ago
Labels: enhancement
#1149 - November 2024 Developers' Call
Issue -
State: closed - Opened by handwerkerd 3 months ago
- 1 comment
Labels: discussion, community
#1148 - Add recommendations on `--n-robust-runs` and `--maxit`
Issue -
State: open - Opened by tsalo 3 months ago
- 4 comments
Labels: documentation
#1147 - Add dash versions of underscore params
Pull Request -
State: closed - Opened by tsalo 3 months ago
Labels: enhancement
#1146 - Update bokeh requirement from <=3.6.0,>=1.0.0 to >=1.0.0,<=3.6.1
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
Labels: maintenance, ignore-for-release
#1145 - Rename variables
Pull Request -
State: closed - Opened by tsalo 3 months ago
- 4 comments
Labels: refactoring
#1144 - Update numpy requirement from <=2.1.2,>=1.16 to >=1.16,<=2.1.3
Pull Request -
State: closed - Opened by dependabot[bot] 3 months ago
Labels: maintenance, ignore-for-release
#1143 - Update nibabel requirement from <=5.3.1,>=2.5.1 to >=2.5.1,<=5.3.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: maintenance, ignore-for-release
#1142 - Update nibabel requirement from <=5.3.0,>=2.5.1 to >=2.5.1,<=5.3.1
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: maintenance, ignore-for-release
#1141 - Update nibabel requirement from <=5.2.1,>=2.5.1 to >=2.5.1,<=5.3.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: maintenance, ignore-for-release
#1140 - Update numpy requirement from <=2.1.1,>=1.16 to >=1.16,<=2.1.2
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: maintenance, ignore-for-release
#1139 - Very small typo fix in documentation
Pull Request -
State: closed - Opened by smoia 4 months ago
Labels: documentation
#1138 - Update bokeh requirement from <=3.5.2,>=1.0.0 to >=1.0.0,<=3.6.0
Pull Request -
State: closed - Opened by dependabot[bot] 4 months ago
Labels: maintenance, ignore-for-release
#1137 - Add external link to release notes
Pull Request -
State: closed - Opened by tsalo 5 months ago
Labels: documentation
#1136 - Update pandas requirement from <=2.2.2,>=2.0 to >=2.0,<=2.2.3
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: maintenance, ignore-for-release
#1135 - Require only one approving review for minor pull requests
Pull Request -
State: closed - Opened by tsalo 5 months ago
Labels: documentation, maintenance
#1133 - ICA on spatially or temporally concatenated multi-echo data
Issue -
State: open - Opened by tsalo 5 months ago
- 6 comments
Labels: discussion, decomposition
#1132 - Moving the RobustICA defaults to a different file
Issue -
State: closed - Opened by eurunuela 5 months ago
- 4 comments
Labels: discussion, priority: medium, effort: low, impact: medium
#1131 - Add elbow-less minimal decision tree
Pull Request -
State: closed - Opened by tsalo 5 months ago
- 2 comments
#1130 - September 2024 Developers' call
Issue -
State: closed - Opened by handwerkerd 5 months ago
Labels: discussion, community
#1129 - Adding a conservative elbow-free decision tree
Issue -
State: open - Opened by handwerkerd 5 months ago
- 3 comments
Labels: enhancement, good first issue, TE-dependence, priority: medium, effort: medium, impact: medium
#1128 - Update scikit-learn requirement from <=1.5.1,>=0.21 to >=0.21,<=1.5.2
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: maintenance, ignore-for-release
#1126 - Update numpy requirement from <=2.1.0,>=1.16 to >=1.16,<=2.1.1
Pull Request -
State: closed - Opened by dependabot[bot] 5 months ago
Labels: maintenance, ignore-for-release
#1125 - Adding robustica option to ICA decomposition to achieve consistent results (new PR)
Pull Request -
State: closed - Opened by handwerkerd 5 months ago
- 10 comments
Labels: enhancement, decomposition
#1124 - docs: add Lestropie as a contributor for code, design, and 2 more
Pull Request -
State: closed - Opened by allcontributors[bot] 6 months ago
#1123 - docs: add BahmanTahayori as a contributor for code, design, and ideas
Pull Request -
State: closed - Opened by allcontributors[bot] 6 months ago
#1122 - Update bokeh requirement from <=3.5.1,>=1.0.0 to >=1.0.0,<=3.5.2
Pull Request -
State: closed - Opened by dependabot[bot] 6 months ago
Labels: maintenance, ignore-for-release
#1121 - Update scipy requirement from <=1.14.0,>=1.2.0 to >=1.2.0,<=1.14.1
Pull Request -
State: closed - Opened by dependabot[bot] 6 months ago
Labels: maintenance, ignore-for-release
#1120 - Update numpy requirement from <=2.0.1,>=1.16 to >=1.16,<=2.1.0
Pull Request -
State: closed - Opened by dependabot[bot] 6 months ago
Labels: maintenance, ignore-for-release
#1119 - No August 2024 Developers Call
Issue -
State: closed - Opened by handwerkerd 6 months ago
Labels: discussion, community
#1118 - Overhaul branch protection rules
Issue -
State: closed - Opened by tsalo 6 months ago
- 2 comments
Labels: community, maintenance
#1117 - Link to the open-multi-echo-data website
Pull Request -
State: closed - Opened by tsalo 6 months ago
- 2 comments
Labels: documentation
#1116 - Update bokeh requirement from <=3.5.0,>=1.0.0 to >=1.0.0,<=3.5.1
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
Labels: maintenance, ignore-for-release
#1115 - Update list of multi-echo datasets
Pull Request -
State: closed - Opened by tsalo 7 months ago
- 1 comment
Labels: documentation
#1114 - documentation and resource updates
Pull Request -
State: closed - Opened by handwerkerd 7 months ago
- 4 comments
Labels: documentation
#1113 - Cleaning up installation instructions
Pull Request -
State: closed - Opened by handwerkerd 7 months ago
Labels: documentation, community
#1112 - Update numpy requirement from <=2.0.0,>=1.16 to >=1.16,<=2.0.1
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1111 - suggested tedana conda environmentl yml
Issue -
State: closed - Opened by rcwelsh 7 months ago
- 5 comments
#1110 - July 2024 Developers' call (shifted to July 24th)
Issue -
State: closed - Opened by handwerkerd 7 months ago
- 6 comments
Labels: discussion, community
#1109 - Update bokeh requirement from <=3.4.1,>=1.0.0 to <=3.5.0,>=3.5.0
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
Labels: maintenance, ignore-for-release
#1108 - Update scikit-learn requirement from <=1.5.0,>=0.21 to <=1.5.1,>=1.5.1
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
Labels: maintenance, ignore-for-release
#1107 - wrong T2* maps
Issue -
State: closed - Opened by qiuge726 7 months ago
- 1 comment
#1106 - Update scipy requirement from <=1.13.1,>=1.2.0 to <=1.14.0,>=1.14.0
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
- 2 comments
Labels: maintenance, ignore-for-release
#1105 - Update bokeh requirement from <=3.4.1,>=1.0.0 to <=3.4.2,>=3.4.2
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
- 4 comments
Labels: maintenance, ignore-for-release
#1104 - Update numpy requirement from <=1.26.4,>=1.16 to >=1.16,<=2.0.0
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1103 - Filter out non-diagonal affine warning
Pull Request -
State: closed - Opened by tsalo 8 months ago
- 2 comments
Labels: bug
#1102 - June 2024 Developers Call
Issue -
State: closed - Opened by handwerkerd 9 months ago
- 2 comments
Labels: discussion, community
#1101 - Update scikit-learn requirement from <=1.4.2,>=0.21 to >=0.21,<=1.5.0
Pull Request -
State: closed - Opened by dependabot[bot] 9 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1100 - Update scipy requirement from <=1.13.0,>=1.2.0 to >=1.2.0,<=1.13.1
Pull Request -
State: closed - Opened by dependabot[bot] 9 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1099 - Consistently use either Legendre polynomials or scaled monomials for detrending
Issue -
State: closed - Opened by tsalo 9 months ago
- 5 comments
#1098 - Use nearest-neighbors interpolation in `plot_component`
Pull Request -
State: closed - Opened by tsalo 9 months ago
- 5 comments
Labels: bug, reports
#1097 - DNM: Draft pre-tedana echo-wise denoising workflow
Pull Request -
State: closed - Opened by tsalo 9 months ago
Labels: enhancement
#1096 - May 2024 Developers call
Issue -
State: closed - Opened by handwerkerd 9 months ago
Labels: discussion, community
#1095 - Display of IC components has a grey outline in report
Issue -
State: closed - Opened by dc307 9 months ago
- 13 comments
Labels: reports
#1094 - minimum nilearn to 0.10.3
Pull Request -
State: closed - Opened by handwerkerd 9 months ago
- 3 comments
Labels: bug, priority: high, reports
#1093 - Proposal to release version 24.0.1
Issue -
State: closed - Opened by handwerkerd 9 months ago
- 2 comments
Labels: discussion, community, maintenance
#1092 - Repeated nilearn warning message for report
Issue -
State: closed - Opened by handwerkerd 10 months ago
- 1 comment
Labels: reports
#1091 - Nonlinear Curve fitting is slow, and other anatomical T2star fitting issues
Issue -
State: open - Opened by dowdlelt 10 months ago
- 1 comment
Labels: enhancement, discussion, T2*/S0 estimation
#1090 - DNM: Detrend optimally combined data before running PCA
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 1 comment
#1089 - Include intercept in `get_coeffs` calls
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 2 comments
Labels: enhancement
#1088 - Refactor `metrics.dependence` module
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 1 comment
Labels: refactoring
#1087 - Add global signal (if `--gscontrol gsr` is used) to component plots
Issue -
State: open - Opened by tsalo 10 months ago
- 2 comments
Labels: enhancement, reports
#1086 - Refactor `gscontrol` module
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 1 comment
Labels: bug, refactoring
#1085 - Minimum image regression relies on distinction between "accepted" and "ignored" components
Issue -
State: closed - Opened by tsalo 10 months ago
- 1 comment
Labels: bug, discussion
#1084 - Elegantly handle missing images in HTML report
Issue -
State: open - Opened by tsalo 10 months ago
- 1 comment
Labels: bug, reports
#1083 - Improve dropout adaptive mask method in cases where multiple bad echoes occur early on
Issue -
State: open - Opened by tsalo 10 months ago
- 2 comments
Labels: enhancement
#1082 - docs: add mvdoc as a contributor for code, bug, and doc
Pull Request -
State: closed - Opened by allcontributors[bot] 10 months ago
- 1 comment
#1081 - April 2024 Developers call
Issue -
State: closed - Opened by handwerkerd 10 months ago
Labels: discussion, community
#1080 - [DOC] desc-optcomDenoised -> desc-denoised
Pull Request -
State: closed - Opened by mvdoc 10 months ago
- 1 comment
Labels: documentation
#1079 - FIX load user-defined mask as expected by plot_adaptive_mask
Pull Request -
State: closed - Opened by mvdoc 10 months ago
- 3 comments
Labels: bug
#1078 - Update bokeh requirement from <=3.4.0,>=1.0.0 to >=1.0.0,<=3.4.1
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1077 - Update nilearn requirement from <=0.10.3,>=0.7 to >=0.7,<=0.10.4
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1076 - Update pandas requirement from <=2.2.1,>=2.0 to >=2.0,<=2.2.2
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1075 - Update scikit-learn requirement from <=1.4.1.post1,>=0.21 to >=0.21,<=1.4.2
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1074 - Update figure-generating notebook
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 3 comments
Labels: documentation
#1073 - Add adaptive mask plot to report
Pull Request -
State: closed - Opened by tsalo 10 months ago
- 6 comments
Labels: enhancement, reports
#1072 - Add adaptive mask figure to the HTML report
Issue -
State: closed - Opened by tsalo 10 months ago
Labels: priority: low, reports, effort: low, impact: low
#1071 - Using tedana in conjunction with rapidtide
Issue -
State: open - Opened by tsalo 10 months ago
- 7 comments
Labels: enhancement, question, discussion
#1070 - `reshape_niimg()` may be too flexible
Issue -
State: open - Opened by tsalo 10 months ago
- 1 comment
Labels: bug, documentation
#1069 - Update scipy requirement from <=1.12.0,>=1.2.0 to >=1.2.0,<=1.13.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: maintenance, ignore-for-release
#1068 - Fix dynamic reports with bokeh 3.4.0 problems
Pull Request -
State: closed - Opened by handwerkerd 11 months ago
- 10 comments