Ecosyste.ms: Issues

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GitHub / MD-Studio/MDStudio issues and pull requests

#151 - Add logs to failed registration

Pull Request - State: closed - Opened by pevisscher over 5 years ago - 1 comment

#150 - Endpoint JSON Schema's only registered if they match endpoint name

Issue - State: open - Opened by marcvdijk over 5 years ago
Labels: bug

#149 - standalone.sh not working

Issue - State: closed - Opened by LourensVeen over 5 years ago - 1 comment

#148 - Allow usage of underscore in schema

Pull Request - State: closed - Opened by pevisscher almost 6 years ago - 1 comment

#147 - load settings from current working directory

Pull Request - State: closed - Opened by MickVanDuijn almost 6 years ago - 1 comment

#146 - Informative log output with failed endpoint registration

Issue - State: open - Opened by marcvdijk almost 6 years ago
Labels: enhancement

#145 - added citation data and zenodo metadata

Pull Request - State: closed - Opened by jspaaks about 6 years ago - 1 comment

#144 - Improve schema validation log output

Issue - State: open - Opened by marcvdijk about 6 years ago
Labels: enhancement

#143 - Fix: use unicode for authmethod

Pull Request - State: closed - Opened by felipeZ about 6 years ago

#142 - WARNING: this commit should be reversed once we update the crossbar v…

Pull Request - State: closed - Opened by felipeZ about 6 years ago - 1 comment

#141 - Hotfix: transform claims dictionary to string

Pull Request - State: closed - Opened by felipeZ about 6 years ago - 1 comment

#140 - Transfer strings between microservices instead of filepaths

Issue - State: open - Opened by felipeZ about 6 years ago

#139 - Start bumping versioning on the MDstudio library

Issue - State: open - Opened by MickVanDuijn about 6 years ago

#138 - Docker containers should not run as root user

Issue - State: open - Opened by MickVanDuijn about 6 years ago

#137 - SCRAM authentication fails

Issue - State: open - Opened by felipeZ about 6 years ago - 1 comment

#136 - Error initializing the components

Issue - State: open - Opened by felipeZ about 6 years ago

#135 - create ansible playbook

Issue - State: closed - Opened by felipeZ over 6 years ago - 2 comments
Labels: enhancement

#134 - Devel

Pull Request - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#133 - Features/v1.0 preparation

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#132 - Add SASLprep to username and password logic

Issue - State: open - Opened by pevisscher over 6 years ago

#131 - Update to mongo 3.6

Issue - State: open - Opened by pevisscher over 6 years ago

#130 - passing extra options to start an endpoint

Issue - State: closed - Opened by felipeZ over 6 years ago

#129 - Use docker-compose version 3.x

Issue - State: open - Opened by felipeZ over 6 years ago
Labels: enhancement

#128 - fixed parameters communication between lie_md and cerise client #86

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#127 - There is not user db

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#126 - (auto)refresh of registered microservice JSON schemas

Issue - State: closed - Opened by marcvdijk over 6 years ago - 1 comment
Labels: enhancement

#125 - Redis docker THP warning on OSX 10.11.6

Issue - State: closed - Opened by marcvdijk over 6 years ago - 1 comment
Labels: wontfix

#124 - Docker, pipenv en PIPENV_VENV_IN_PROJECT not playing nice

Issue - State: open - Opened by marcvdijk over 6 years ago
Labels: bug

#123 - Call micro service without 'with self.group_context' does not work

Issue - State: open - Opened by marcvdijk over 6 years ago - 1 comment
Labels: bug, needs confirmation

#122 - mdstudio 'service' endpoints

Issue - State: open - Opened by marcvdijk over 6 years ago
Labels: wishlist

#120 - Unable to load pickle files in python 3

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#119 - Unable to register component in python

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#118 - Error starting component with pipenv

Issue - State: closed - Opened by felipeZ over 6 years ago

#117 - Crossbar docker not starting on Mac

Issue - State: closed - Opened by marcvdijk over 6 years ago
Labels: bug

#116 - Database users~logger is not created

Issue - State: closed - Opened by felipeZ over 6 years ago - 2 comments

#115 - Revert "Features/v1.0 preparation"

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#114 - Features/v1.0 preparation

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#113 - remove job from cerise and DB if it fails and can be restart

Issue - State: closed - Opened by felipeZ over 6 years ago

#112 - merge lie graph development

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#111 - Crossbar container can't communicate with redis

Issue - State: closed - Opened by felipeZ over 6 years ago - 4 comments

#110 - Error starting crossbar

Issue - State: closed - Opened by felipeZ over 6 years ago

#109 - Broken v1

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#108 - merge latest master developments

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#107 - merge marc development

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#106 - Pipenv Python header issue

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#105 - include latest development of master

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#104 - Adapt Haddock to new api

Issue - State: closed - Opened by felipeZ over 6 years ago

#103 - Add round robin to propka microservice

Issue - State: open - Opened by felipeZ over 6 years ago

#102 - remove unused settings from microservices

Issue - State: closed - Opened by felipeZ over 6 years ago

#101 - Features/v1.0 preparation

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#99 - get_log_claims error

Issue - State: closed - Opened by felipeZ over 6 years ago

#98 - Features/v1.0 preparation

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#97 - ContextManager error when starting the system

Issue - State: closed - Opened by felipeZ over 6 years ago

#96 - crossbar container fails on starts

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#95 - Error import ContextManager

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#94 - Support for mongodb 4.0

Issue - State: open - Opened by pevisscher over 6 years ago
Labels: wishlist

#93 - Create a KeyValue storage component

Issue - State: open - Opened by pevisscher over 6 years ago
Labels: enhancement

#92 - Adapt the lie_structures component to the new microservice API

Issue - State: closed - Opened by felipeZ over 6 years ago

#91 - Adapt the workflow runner to the new microservice API

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#90 - Adapt the lie_schema component to the new API

Issue - State: closed - Opened by felipeZ over 6 years ago

#89 - Adapt pylie microservice to the new microservice API

Issue - State: closed - Opened by felipeZ over 6 years ago

#88 - Adapt propka microservice to the new components style

Issue - State: closed - Opened by felipeZ over 6 years ago

#87 - Adapt plant docking microservice to the new component style

Issue - State: closed - Opened by felipeZ over 6 years ago

#86 - adapt MD microservice to the new component style

Issue - State: closed - Opened by felipeZ over 6 years ago

#85 - adapt the lie_graph microservice to the new component style

Issue - State: closed - Opened by felipeZ over 6 years ago

#84 - adapt the command line interface to new component style

Issue - State: closed - Opened by felipeZ over 6 years ago

#83 - adapt amber microservice to new component style

Issue - State: closed - Opened by felipeZ over 6 years ago

#82 - Features/v1.0 preparation

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#81 - Issue unpickling model

Issue - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#80 - add a job type in the mongodb

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#79 - use the same method to compute solvation or protein ligand md #74

Pull Request - State: closed - Opened by felipeZ over 6 years ago - 1 comment

#78 - generalize getenergy script

Issue - State: closed - Opened by felipeZ over 6 years ago
Labels: enhancement

#77 - (Angular) UI projects worth looking at

Issue - State: closed - Opened by marcvdijk over 6 years ago
Labels: wishlist

#76 - MD-related components worth adding

Issue - State: open - Opened by marcvdijk over 6 years ago
Labels: wishlist

#75 - Add support for WAMP communication over TLS

Issue - State: closed - Opened by marcvdijk over 6 years ago - 1 comment
Labels: enhancement

#74 - decouple the solvent-ligand from the protein-ligand MD step

Issue - State: closed - Opened by felipeZ over 6 years ago
Labels: enhancement

#73 - Support for mongo 3.6

Issue - State: closed - Opened by kmvisscher over 6 years ago - 1 comment

#72 - inject all user input values into gromit

Issue - State: closed - Opened by felipeZ over 6 years ago
Labels: enhancement

#71 - Prototype

Pull Request - State: closed - Opened by felipeZ over 6 years ago

#70 - pylie and lie_pylie

Issue - State: closed - Opened by felipeZ over 6 years ago - 2 comments
Labels: bug

#69 - MD microservice concurrency

Issue - State: closed - Opened by felipeZ almost 7 years ago
Labels: enhancement

#68 - pylie and lie_pylie

Issue - State: closed - Opened by felipeZ almost 7 years ago

#67 - Prototype

Pull Request - State: closed - Opened by felipeZ almost 7 years ago

#66 - Implement rate limiting

Issue - State: open - Opened by pevisscher almost 7 years ago
Labels: wishlist

#64 - Endpoint to retrieve the schemas for an endpoint

Issue - State: closed - Opened by pevisscher almost 7 years ago
Labels: wishlist

#55 - Finish User & Group endpoints and repository

Issue - State: open - Opened by pevisscher almost 7 years ago
Labels: enhancement

#54 - Previous

Pull Request - State: closed - Opened by felipeZ almost 7 years ago

#46 - Improve context switching

Issue - State: closed - Opened by pevisscher almost 7 years ago - 1 comment
Labels: bug

#41 - Integrate a blob storage server into the core components

Issue - State: open - Opened by pevisscher almost 7 years ago
Labels: enhancement

#40 - spit master branch

Issue - State: closed - Opened by felipeZ almost 7 years ago - 1 comment

#39 - Initial commit for v1.0 preparation

Pull Request - State: closed - Opened by pevisscher almost 7 years ago

#35 - improve getEnergies script

Issue - State: closed - Opened by felipeZ almost 7 years ago - 1 comment

#32 - Improve lie_md module

Issue - State: closed - Opened by felipeZ almost 7 years ago - 3 comments
Labels: enhancement

#31 - MD microservice

Issue - State: closed - Opened by felipeZ almost 7 years ago - 1 comment
Labels: enhancement

#29 - pybabel causing random errors

Issue - State: closed - Opened by felipeZ almost 7 years ago - 1 comment
Labels: bug

#18 - use setup.py to install the depencies

Issue - State: closed - Opened by felipeZ about 7 years ago
Labels: enhancement

#16 - add automatic code reviewing with Codacy

Issue - State: closed - Opened by felipeZ about 7 years ago - 1 comment
Labels: enhancement