Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / LorenFrankLab/spyglass issues and pull requests
#608 - Update 03_lfp notebook to reflect LFP changes
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
- 1 comment
Labels: LFP
#607 - Update analytic signal notebook
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
- 1 comment
Labels: LFP
#606 - Lfp_analysis_move
Pull Request -
State: closed - Opened by lfrank about 1 year ago
Labels: LFP
#605 - fix reference bug in lfp_band.py
Pull Request -
State: closed - Opened by MichaelCoulter about 1 year ago
- 1 comment
#604 - Add `spyglass` to the list of analysis and visualization tools in NWB overview website
Issue -
State: closed - Opened by khl02007 about 1 year ago
- 1 comment
#603 - electrode id sorting problem in LFPband
Issue -
State: closed - Opened by MichaelCoulter about 1 year ago
- 6 comments
#602 - error during spikesortingrecording populate
Issue -
State: closed - Opened by denissemorales about 1 year ago
- 5 comments
#601 - Restructure LFP and Ripple directories
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
Labels: LFP, ripple, merge
#600 - Add notebook demonstrating some approaches to alter tables manually
Pull Request -
State: closed - Opened by rly about 1 year ago
- 1 comment
#599 - Remove nb_conda from conda environment files to fix installation error
Pull Request -
State: closed - Opened by rly about 1 year ago
#598 - nn_isolation metric fix
Pull Request -
State: closed - Opened by lfrank about 1 year ago
- 2 comments
#597 - fixed nn_isolation to return one number
Pull Request -
State: closed - Opened by denissemorales about 1 year ago
#596 - Pull request test failing
Issue -
State: closed - Opened by dpeg22 about 1 year ago
- 1 comment
#595 - Modify PositionOutput.fetch1_dataframe to use upstream methods
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
- 3 comments
Labels: bug, position, merge
#594 - Move LFPElectrodeGroup to lfp_electrode.py
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
- 4 comments
Labels: bug
#593 - Path handling and notebook revisions
Pull Request -
State: closed - Opened by CBroz1 about 1 year ago
- 1 comment
#592 - NWB folder writing permission for a team
Issue -
State: closed - Opened by xlsun79 about 1 year ago
- 9 comments
Labels: enhancement
#591 - Merge class appears to break `dj.ERD` function
Issue -
State: closed - Opened by rly about 1 year ago
- 6 comments
Labels: bug
#590 - reference LFP and then do artifact detection
Issue -
State: open - Opened by MichaelCoulter about 1 year ago
- 2 comments
Labels: LFP
#589 - 02_curation tutorial is broken
Issue -
State: closed - Opened by JoshiAbhilasha about 1 year ago
- 3 comments
#588 - update LFPBandV1 fetch1_dataframe
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
Labels: bug
#587 - Key change in call to fetch_nwb in LFPBandV1().compute_analytic_signal
Issue -
State: closed - Opened by samuelbray32 about 1 year ago
#586 - Allow table entries to be associated with LabTeam of choice
Issue -
State: closed - Opened by dpeg22 about 1 year ago
- 1 comment
Labels: enhancement
#585 - Convert Merge Table doc Example section into notebook
Issue -
State: closed - Opened by CBroz1 about 1 year ago
Labels: documentation
#584 - Update LFP Notebook for merge tables, fix get_merge_parent, fix LFPBand for merge tables, fix df fetch in LFP
Pull Request -
State: closed - Opened by edeno about 1 year ago
- 3 comments
#583 - Bump python version required
Pull Request -
State: closed - Opened by edeno about 1 year ago
- 1 comment
#582 - artifact detection across tetrodes for spike sorting
Issue -
State: closed - Opened by MichaelCoulter about 1 year ago
- 6 comments
Labels: spike sorting
#581 - Check pypi install before paper release
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
Labels: infrastructure
#580 - Prune environment dependencies.
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
Labels: infrastructure
#579 - Document using mamba over conda
Issue -
State: closed - Opened by edeno about 1 year ago
#578 - Add pypi api token
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
#576 - Full setup tutorial / update installation instructions to make sure others can set things up
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
#575 - Create online hub for tutorials
Issue -
State: closed - Opened by edeno about 1 year ago
- 2 comments
Labels: enhancement, infrastructure
#574 - Create a medium sized NWB file for spike sorting and position tutorials
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
#573 - Update initial tutorials to use small NWB file
Issue -
State: closed - Opened by edeno about 1 year ago
- 1 comment
#572 - Add support to Position Pipeline for >1 camera position tracking
Issue -
State: open - Opened by dpeg22 about 1 year ago
- 1 comment
Labels: enhancement, position
#571 - Fix types
Issue -
State: closed - Opened by edeno about 1 year ago
- 2 comments
#570 - Figurl visualization for video, dio, ephys traces.
Issue -
State: closed - Opened by edeno about 1 year ago
#569 - Update Position pipeline merge structure
Pull Request -
State: closed - Opened by dpeg22 about 1 year ago
- 3 comments
Labels: position
#568 - a few typos in lfp_artifact.py
Pull Request -
State: closed - Opened by MichaelCoulter over 1 year ago
#567 - remove extra parameter for clusterless thresholder
Pull Request -
State: closed - Opened by MichaelCoulter over 1 year ago
#566 - error when trying to run spikesorting for clusterless spikes
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
- 2 comments
Labels: bug
#565 - Improved Merge Table documentation
Pull Request -
State: closed - Opened by CBroz1 over 1 year ago
#564 - Merge class: `get_part`, `fetch`
Pull Request -
State: closed - Opened by CBroz1 over 1 year ago
#563 - Remove skan and polygon selector
Pull Request -
State: closed - Opened by edeno over 1 year ago
#562 - Kachery_updates
Pull Request -
State: closed - Opened by lfrank over 1 year ago
- 1 comment
#561 - Document sharing with kachery
Issue -
State: closed - Opened by edeno over 1 year ago
- 2 comments
Labels: documentation
#558 - Mkdocs console block line breaks
Issue -
State: closed - Opened by CBroz1 over 1 year ago
Labels: documentation
#557 - Allow for multiple camera recordings within single epoch
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
- 4 comments
Labels: enhancement
#556 - Merge table class
Pull Request -
State: closed - Opened by CBroz1 over 1 year ago
- 2 comments
#554 - device name: ‘dataacq_device0’ isn’t unique
Issue -
State: closed - Opened by JoshiAbhilasha over 1 year ago
- 5 comments
Labels: bug, common
#546 - Match up pos and epoch interval names based on overlapping valid times
Issue -
State: closed - Opened by acomrie over 1 year ago
- 1 comment
Labels: enhancement
#545 - Mixin for merge table
Issue -
State: closed - Opened by edeno over 1 year ago
- 8 comments
Labels: enhancement
#542 - Add instructions on how to build documentation
Issue -
State: closed - Opened by zoldello over 1 year ago
#541 - Images not generated by code are not showing up in documentation notebooks.
Issue -
State: closed - Opened by zoldello over 1 year ago
- 7 comments
Labels: bug, documentation
#538 - Add position linearization
Pull Request -
State: closed - Opened by edeno over 1 year ago
- 1 comment
Labels: position
#537 - SPY-536-tweaks-to-mkdocs-doc
Pull Request -
State: closed - Opened by zoldello over 1 year ago
- 1 comment
Labels: documentation
#535 - Add method to utils for deleting from merge tables
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
- 2 comments
Labels: enhancement
#533 - Move all env variables to `dj.config`
Issue -
State: closed - Opened by CBroz1 over 1 year ago
- 1 comment
#532 - Add PR template
Issue -
State: closed - Opened by CBroz1 over 1 year ago
- 1 comment
#531 - Establish norms for branch/fork behavior
Issue -
State: closed - Opened by CBroz1 over 1 year ago
- 5 comments
#530 - `fetch_nwb` mixin class
Issue -
State: closed - Opened by CBroz1 over 1 year ago
Labels: enhancement
#529 - A more pythonic user interface
Issue -
State: open - Opened by khl02007 over 1 year ago
- 4 comments
Labels: enhancement
#528 - Spike sorting recordings across multiple days together
Issue -
State: open - Opened by khl02007 over 1 year ago
- 1 comment
Labels: enhancement, spike sorting
#526 - SpikeInterface does not have n_shifts in the thresh spike detector function
Issue -
State: closed - Opened by shijiegu over 1 year ago
- 1 comment
#525 - Add secondary key in Interval List that describes the type of interval
Issue -
State: closed - Opened by edeno over 1 year ago
Labels: common
#524 - [WIP] Add versioning to Spike Sorting Pipeline
Pull Request -
State: closed - Opened by edeno over 1 year ago
- 1 comment
Labels: spike sorting
#523 - Add versioning to Ripple pipeline and restructure LFPBand directories
Pull Request -
State: closed - Opened by edeno over 1 year ago
- 9 comments
Labels: LFP, ripple
#517 - Adding draft analytic_signal code to lfp schema
Pull Request -
State: open - Opened by xlsun79 over 1 year ago
- 3 comments
#516 - For adding anlytic_signal analyses as methods under LFPBand
Pull Request -
State: closed - Opened by xlsun79 over 1 year ago
- 2 comments
#515 - Local installation documentation should direct users to install pypi version of spikeinterface
Issue -
State: closed - Opened by edeno over 1 year ago
- 1 comment
#514 - Error of populating quality metrics (I get nn_isolation with two entries, not one)
Issue -
State: closed - Opened by yangsunhwang over 1 year ago
- 5 comments
Labels: bug, spike sorting
#513 - Update version and changelog for 0.4.0 release
Pull Request -
State: closed - Opened by rly over 1 year ago
- 1 comment
#512 - Rename FirFilter to FirFilterParameters
Pull Request -
State: closed - Opened by rly over 1 year ago
- 2 comments
#511 - Fix lfp artifact detection
Pull Request -
State: closed - Opened by MichaelCoulter over 1 year ago
- 2 comments
#510 - `FileNotFoundError: [Errno 2] "dot" not found in path.` when running /PATH/to/spyglass/notebooks/00_intro_ipynb
Issue -
State: open - Opened by donghoon-shin over 1 year ago
Labels: documentation
#509 - Create new ripple pipeline that depends on new position pipeline and lfp pipeline
Issue -
State: closed - Opened by edeno over 1 year ago
Labels: enhancement, ripple
#508 - Move Linearization to new Position Pipeline (or create separate pipeline)
Issue -
State: closed - Opened by edeno over 1 year ago
Labels: position
#507 - ModuleNotFoundError: No module named 'replay_trajectory_classification.misc'
Issue -
State: closed - Opened by donghoon-shin over 1 year ago
- 1 comment
#506 - DLC Usability tracker
Issue -
State: closed - Opened by dpeg22 over 1 year ago
- 1 comment
Labels: documentation, enhancement, position
#505 - Add DLC schema images for Tutorial notebooks
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
Labels: position
#504 - LFPBand and LFP bug fixes
Pull Request -
State: closed - Opened by acomrie over 1 year ago
- 1 comment
#503 - [WIP] Split nwb spatial series objects into multiple pynwb objects to comply with best practices
Pull Request -
State: open - Opened by dpeg22 over 1 year ago
- 1 comment
Labels: bug, position
#502 - Make fixes to spyglass-position env creation and catch centroid cases
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
Labels: bug, position
#501 - position schema to do list
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
- 1 comment
#500 - lfp schema to do list
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
- 1 comment
#499 - spikesorting schema to do list
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
#498 - spyglass intro / nwb file to do list
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
#497 - Handle the absence of video_frame_ind in the position pipeline
Issue -
State: open - Opened by dpeg22 over 1 year ago
Labels: position
#496 - Analytic signal analyses for lfp band
Pull Request -
State: closed - Opened by xlsun79 over 1 year ago
- 3 comments
Labels: enhancement, LFP
#495 - type error with ripple detection
Issue -
State: closed - Opened by MichaelCoulter over 1 year ago
- 2 comments
#494 - Cannot import schema created under my account unless adding my username to it
Issue -
State: closed - Opened by xlsun79 over 1 year ago
- 3 comments
#493 - analysis nwb files can only be written for individual nwb files
Issue -
State: closed - Opened by jguides over 1 year ago
- 2 comments
#492 - problem with regular artifact detection
Issue -
State: open - Opened by MichaelCoulter over 1 year ago
- 3 comments
#491 - Remove environment_test.yml
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
#490 - Update position notebooks for new pipeline
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
- 9 comments
Labels: position
#489 - [WIP] Fix pos ntbks
Pull Request -
State: closed - Opened by dpeg22 over 1 year ago
- 1 comment
#488 - LFP v1 suggestions
Issue -
State: open - Opened by acomrie over 1 year ago
- 5 comments
Labels: LFP
#487 - Move LFP merge table to outside v1
Pull Request -
State: open - Opened by edeno over 1 year ago
- 4 comments
Labels: LFP
#486 - Fix `spikeinterface` get sorter params function
Pull Request -
State: closed - Opened by khl02007 over 1 year ago