Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / LorenFrankLab/spyglass issues and pull requests
#813 - Update waveform_features.py
Pull Request -
State: closed - Opened by MichaelCoulter 8 months ago
#812 - Imported spike annotation
Pull Request -
State: closed - Opened by samuelbray32 8 months ago
- 2 comments
#811 - Address join-compatibility issue for long chains
Pull Request -
State: closed - Opened by CBroz1 8 months ago
#810 - sgi.insert_session crashes if first name has a space
Issue -
State: closed - Opened by zoldello 8 months ago
- 2 comments
Labels: bug, common
#809 - sgi.insert_sessions(nwb_file_name) should be transactional or not throw an exception if one or more table insertion fails
Issue -
State: closed - Opened by zoldello 8 months ago
- 1 comment
#808 - Blackify 24.1.1
Pull Request -
State: closed - Opened by CBroz1 8 months ago
#807 - Filtering units for decoding
Pull Request -
State: closed - Opened by edeno 8 months ago
- 11 comments
Labels: decoding
#806 - More robust `delete_downstream_merge`
Pull Request -
State: closed - Opened by CBroz1 8 months ago
- 3 comments
Labels: infrastructure
#805 - artifact detection for clusterless decoding
Issue -
State: closed - Opened by MichaelCoulter 8 months ago
- 2 comments
Labels: enhancement, decoding
#804 - error when inserting an example session
Issue -
State: closed - Opened by magland 8 months ago
- 4 comments
Labels: bug, common
#803 - permissions issue when trying to populate SpikeSortingRecording
Issue -
State: closed - Opened by MichaelCoulter 8 months ago
- 5 comments
#802 - Update 01_Insert_Data.ipynb
Pull Request -
State: closed - Opened by magland 8 months ago
- 1 comment
#801 - "Specified key was too long" mysql error on importing example .nwb with mysql 8.0
Issue -
State: closed - Opened by magland 8 months ago
- 2 comments
#800 - proposal: rename test_mode configuration option to no_prompts_mode
Issue -
State: open - Opened by magland 8 months ago
Labels: enhancement
#799 - Updating 00_Setup to add instructions about registering for kachery-cloud
Issue -
State: open - Opened by bsharma-hiprep 8 months ago
Labels: documentation, enhancement
#798 - Dlc changes
Pull Request -
State: closed - Opened by bsharma-hiprep 8 months ago
- 3 comments
Labels: position
#797 - line 424 in dlc_post_estimation is removed as it stalls the pose esti…
Pull Request -
State: closed - Opened by bsharma-hiprep 8 months ago
- 3 comments
#796 - Proofing and minor edits to Tutorial notebooks 11-32
Pull Request -
State: closed - Opened by samuelbray32 8 months ago
- 1 comment
#795 - Addressing #789, failing tests
Pull Request -
State: closed - Opened by CBroz1 8 months ago
- 1 comment
#794 - Merge table notebook should do a better job of explaining the purpose of merge tables
Issue -
State: closed - Opened by edeno 8 months ago
Labels: enhancement
#792 - cautious delete gives foreign key constraint error
Issue -
State: closed - Opened by MichaelCoulter 8 months ago
- 1 comment
Labels: bug
#791 - Cautious delete restriction
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 1 comment
Labels: bug
#790 - DecodingV1 with non lineartrack
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 2 comments
Labels: decoding
#789 - improve docs - provide more up-to-date details in configuring dj_local_conf.json
Issue -
State: closed - Opened by magland 8 months ago
- 2 comments
#788 - Add `UnitSelection` table
Pull Request -
State: closed - Opened by khl02007 9 months ago
#787 - runtime error in dlc pipeline
Issue -
State: closed - Opened by rpswenson 9 months ago
- 3 comments
Labels: bug, position
#786 - Fix _merge_repr for numeric data types
Pull Request -
State: closed - Opened by CBroz1 9 months ago
#785 - More robust handling of spatial series
Issue -
State: open - Opened by edeno 9 months ago
Labels: enhancement, position
#784 - NWB File name conventions drifting.
Issue -
State: closed - Opened by edeno 9 months ago
#783 - WIP: Mixin resolves _nwb_table attr for Merge
Pull Request -
State: closed - Opened by CBroz1 9 months ago
#782 - Decoding pipeline edits for imported data
Pull Request -
State: closed - Opened by edeno 9 months ago
- 4 comments
#781 - Add ability to filter sorted units in decoding
Issue -
State: closed - Opened by edeno 9 months ago
- 2 comments
Labels: enhancement, decoding
#780 - Insert into ImportedSpikeSorting should also be inserted into merge table
Issue -
State: closed - Opened by edeno 9 months ago
- 1 comment
Labels: spike sorting
#779 - Add overview to docs
Pull Request -
State: closed - Opened by edeno 9 months ago
#778 - `IntervalList` is hard to use and highly redundant in contents
Issue -
State: open - Opened by CBroz1 9 months ago
- 4 comments
Labels: enhancement, common
#777 - Add new function to retrieve spatial series from NWB file
Pull Request -
State: closed - Opened by khl02007 9 months ago
- 5 comments
#776 - Docs fixes for decoding pipeline
Pull Request -
State: closed - Opened by CBroz1 9 months ago
- 2 comments
#775 - LFPV1 interval insert
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 1 comment
#774 - Bug when decoding_kwargs set as None
Issue -
State: closed - Opened by samuelbray32 9 months ago
- 3 comments
Labels: bug, decoding
#773 - A function to regenerate recording in case it is deleted in spike sorting v0
Issue -
State: open - Opened by khl02007 9 months ago
- 1 comment
Labels: enhancement, spike sorting
#772 - DLC notebooks 21 and 22
Pull Request -
State: closed - Opened by emreybroyles 9 months ago
- 2 comments
#771 - DLC Project Insert hangs
Issue -
State: closed - Opened by rpswenson 9 months ago
- 3 comments
Labels: bug, position
#770 - Add sampling rate to LFPV1 interval_list_name
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 2 comments
#769 - Minor decoding fixes
Pull Request -
State: closed - Opened by edeno 9 months ago
- 1 comment
#768 - merge_insert uniqueness
Issue -
State: closed - Opened by edeno 9 months ago
- 1 comment
Labels: bug, merge
#767 - Comment out video section for mini-rec in Update 20_Position_Trodes.ipynb
Pull Request -
State: closed - Opened by edeno 9 months ago
- 1 comment
#766 - Handle numpy arrays in `create_lfp_electrode_group`
Pull Request -
State: closed - Opened by edeno 9 months ago
#765 - Use PositionOutput to get data in example notebook
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 1 comment
#764 - Update LFP notebook
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 1 comment
#763 - Unavailable key in LFPV1.make()
Issue -
State: closed - Opened by samuelbray32 9 months ago
- 2 comments
Labels: bug, LFP
#762 - Print session/exp summary, fix lfp target sample fetch
Pull Request -
State: closed - Opened by CBroz1 9 months ago
#761 - Fix SpikeSortingOutput get_recording and get_sorting
Pull Request -
State: closed - Opened by edeno 9 months ago
#760 - Fix the length of `object_id` for `ImportedSpikeSorting`
Pull Request -
State: closed - Opened by khl02007 9 months ago
#759 - `merge_restrict` failure case
Issue -
State: closed - Opened by edeno 9 months ago
- 2 comments
Labels: bug, merge
#758 - Restrict UnitWaveformFeaturesGroup and SortedSpikesGroup by nwb_file_name
Pull Request -
State: closed - Opened by edeno 9 months ago
#757 - restrict get position info by session name
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
#756 - Restriction specificity in load_position_info
Issue -
State: closed - Opened by samuelbray32 9 months ago
Labels: bug, decoding
#755 - Update docs to reflect new notebook structure
Issue -
State: closed - Opened by edeno 9 months ago
- 1 comment
Labels: bug, documentation
#754 - Deleting bodyparts from BodyPart table in DLC pipeline
Issue -
State: closed - Opened by emreybroyles 9 months ago
- 5 comments
#753 - Dlc debug: smoothing_duration fix
Pull Request -
State: closed - Opened by emreybroyles 9 months ago
#752 - Unrecognized keyword in pandas
Issue -
State: closed - Opened by samuelbray32 9 months ago
- 1 comment
Labels: bug, position
#751 - Remove old `delete` method from `SpikeSorting` table of V0 pipeline
Pull Request -
State: closed - Opened by khl02007 9 months ago
#750 - Move `figurl_views` to spike sorting v0
Pull Request -
State: closed - Opened by khl02007 9 months ago
#749 - Centralize get_class logic in Merge
Pull Request -
State: closed - Opened by CBroz1 9 months ago
#748 - Move `figurl_views` module into the spikesorting pipeline
Issue -
State: closed - Opened by edeno 9 months ago
#747 - Remove logger.info() without message
Pull Request -
State: closed - Opened by edeno 9 months ago
#746 - Fix PositionOutput.fetch1_dataframe bug
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
#745 - Error in PositionOutput.fetch1_dataframe
Issue -
State: closed - Opened by samuelbray32 9 months ago
Labels: bug, position
#744 - Can't populate LFPV1 with different entries for the same nwb_file_name
Issue -
State: closed - Opened by sharon-chiang 9 months ago
- 10 comments
Labels: bug, LFP
#743 - Pytest revamp
Pull Request -
State: closed - Opened by CBroz1 9 months ago
#742 - Interval list types
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 2 comments
#741 - Check for upsampled data in trodes fetch dataframe
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
Labels: position
#740 - Fetch upsampled trodes position
Pull Request -
State: closed - Opened by samuelbray32 9 months ago
- 1 comment
Labels: position
#739 - Error in TrodesPosV1 fetch1_dataframe with upsampled data
Issue -
State: closed - Opened by samuelbray32 9 months ago
Labels: bug, position
#738 - Spikesorting deletion prevention
Issue -
State: closed - Opened by samuelbray32 10 months ago
- 1 comment
Labels: bug
#737 - Class-specific implementation of _merge_restrict_parents
Issue -
State: closed - Opened by samuelbray32 10 months ago
- 1 comment
Labels: enhancement, merge
#736 - Update Trodes Position notebook to use PositionOutput
Issue -
State: closed - Opened by edeno 10 months ago
Labels: bug, position
#735 - Add detail to sharing notebook
Pull Request -
State: closed - Opened by samuelbray32 10 months ago
- 2 comments
#734 - #732
Pull Request -
State: closed - Opened by CBroz1 10 months ago
#733 - Circular import with KacheryZone
Issue -
State: closed - Opened by samuelbray32 10 months ago
- 2 comments
Labels: bug
#732 - Merge fetch_nwb errors
Issue -
State: closed - Opened by edeno 10 months ago
- 1 comment
Labels: bug
#731 - Decoding pipeline
Pull Request -
State: closed - Opened by edeno 10 months ago
- 6 comments
#730 - print -> logger
Pull Request -
State: closed - Opened by CBroz1 10 months ago
- 1 comment
#729 - Helper function for adding data to kachery
Pull Request -
State: closed - Opened by samuelbray32 10 months ago
Labels: enhancement
#728 - Handle sortings in which no units are detected (SpikeSortingV1)
Pull Request -
State: closed - Opened by khl02007 10 months ago
#727 - SpikeSortingOutput fetch_nwb returning more files
Issue -
State: closed - Opened by edeno 10 months ago
- 4 comments
#726 - Handle single intervals in spike sorting
Pull Request -
State: closed - Opened by edeno 10 months ago
#725 - SpikeSorting fails if no units are detected
Issue -
State: closed - Opened by edeno 10 months ago
- 3 comments
#724 - Priority for fetch_nwb function in merge tables
Pull Request -
State: closed - Opened by samuelbray32 10 months ago
Labels: bug, merge
#723 - Add `mkdir` to pass pytests
Pull Request -
State: closed - Opened by CBroz1 10 months ago
#722 - Env variables for DLC
Pull Request -
State: closed - Opened by CBroz1 10 months ago
- 1 comment
#721 - Avoid bug in spikeinterface for low spikecounts
Pull Request -
State: closed - Opened by samuelbray32 10 months ago
Labels: bug, spike sorting
#720 - Fix ref channel append error
Pull Request -
State: closed - Opened by khl02007 10 months ago
#719 - Make `insert_sessions` more robust to failures to populate
Issue -
State: closed - Opened by edeno 10 months ago
- 4 comments
Labels: enhancement, common
#718 - Quality Metrics bug in spikeinterface
Issue -
State: closed - Opened by samuelbray32 10 months ago
#717 - V0 migration model, revised
Pull Request -
State: closed - Opened by CBroz1 10 months ago
- 1 comment
#716 - VideoFile fails to insert in the tutorial using the minirec file
Issue -
State: closed - Opened by edeno 10 months ago
Labels: documentation, position
#715 - Change method of defining base dir in get_abs_path
Pull Request -
State: closed - Opened by samuelbray32 10 months ago
#714 - Hotfix for attrib error `__` -> `_nwb_table_dict`
Pull Request -
State: closed - Opened by CBroz1 10 months ago
#713 - Figurl to visualize ripple detection as a way to diagnose problems
Issue -
State: closed - Opened by edeno 10 months ago
Labels: enhancement, ripple