Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / LorenFrankLab/spyglass issues and pull requests
#916 - Permission issue on figURL curation populate
Issue -
State: closed - Opened by rpswenson 6 months ago
- 9 comments
#915 - Merge key conflict in PositionOutput
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 3 comments
Labels: bug, position, merge
#914 - Error when kachery sharing old analysis nwb files
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 3 comments
Labels: bug, infrastructure
#913 - Quickfix for fetch_nwb
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
#912 - Incorrect behavior for fetch_nwb in Linearized position tables
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 5 comments
Labels: bug, position
#911 - Redundant deprecated Kachery tables in common_nwbfile
Issue -
State: closed - Opened by samuelbray32 6 months ago
Labels: bug, common
#910 - Spikesorting quality of life helpers
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
- 4 comments
Labels: spike sorting
#908 - Export notebook on JupyterHub
Issue -
State: open - Opened by CBroz1 6 months ago
- 2 comments
#907 - Profile pipeline code and storage to consider compute/storage tradeoffs.
Issue -
State: closed - Opened by edeno 6 months ago
- 1 comment
Labels: enhancement
#906 - kachery cloud permission error
Issue -
State: closed - Opened by jguides 6 months ago
- 6 comments
#904 - Hot fixes for clusterless `get_ahead_behind_distance` and `get_spike_times`
Pull Request -
State: closed - Opened by edeno 6 months ago
Labels: bug, spike sorting, decoding
#903 - Misc Issues
Pull Request -
State: closed - Opened by CBroz1 6 months ago
- 3 comments
#902 - Tiny bug in Clusterless get_ahead_behind distance
Issue -
State: closed - Opened by samuelbray32 6 months ago
Labels: bug, decoding
#901 - Metric parameters has unexpected argument during metric curation
Issue -
State: closed - Opened by rpswenson 6 months ago
- 8 comments
#900 - Quickfix: Change existing source script to spyglass version
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
- 1 comment
#899 - Group part delete propagation
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
- 5 comments
Labels: infrastructure
#898 - Add pynapple support
Pull Request -
State: closed - Opened by edeno 6 months ago
Labels: enhancement, infrastructure
#897 - Add spyglass version to created analysis nwb files
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
#896 - Cannot delete other tables due to "No datajoint user name on LabMember table"
Issue -
State: closed - Opened by xlsun79 6 months ago
- 2 comments
#895 - populating QualityMetrics in old (v0) spikesorting pipeline errors out due to spikeinterface change
Issue -
State: closed - Opened by jguides 6 months ago
- 1 comment
#894 - Save spyglass version in analysis nwb
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 3 comments
#893 - Update call to get_template_extremum
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
- 5 comments
#892 - When database is altered from update, add scripts and note in change log
Issue -
State: closed - Opened by edeno 7 months ago
- 4 comments
Labels: enhancement
#891 - Provide a better interface to run pipelines
Issue -
State: open - Opened by khl02007 7 months ago
- 2 comments
Labels: enhancement
#890 - Provide a better interface to view the outputs of analyses
Issue -
State: closed - Opened by khl02007 7 months ago
- 1 comment
Labels: enhancement
#889 - Provide better support for Neuropixels recordings
Issue -
State: open - Opened by khl02007 7 months ago
Labels: enhancement
#888 - Hhmi notebook check
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
- 1 comment
#887 - Missing copy file in HHMI demo image
Issue -
State: closed - Opened by samuelbray32 7 months ago
#886 - delete from `SpikeSortingOutput` exceeds max attempts
Issue -
State: closed - Opened by sharon-chiang 7 months ago
- 15 comments
Labels: bug, infrastructure
#885 - `_get_exp_summary()` fails on `LabMember` table
Issue -
State: closed - Opened by jguides 7 months ago
- 3 comments
Labels: bug, common
#884 - Outdated call to spikeinterface
Issue -
State: closed - Opened by samuelbray32 7 months ago
Labels: bug, spike sorting
#883 - Edits for docs
Pull Request -
State: closed - Opened by CBroz1 7 months ago
#882 - Fix dlc video and kachery cloud config
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
#881 - Spyglass Config Bugs
Issue -
State: closed - Opened by samuelbray32 7 months ago
Labels: bug, infrastructure
#880 - MetricCuration populate uses invalid NumpySorting attribute
Issue -
State: closed - Opened by rpswenson 7 months ago
- 3 comments
#879 - Document use of mixin class for custom spyglass tables
Issue -
State: closed - Opened by edeno 7 months ago
Labels: documentation, enhancement
#878 - Add ability to fetch pynapple object
Issue -
State: closed - Opened by edeno 7 months ago
Labels: enhancement
#877 - Insufficient privileges when inserting SortInterval table
Issue -
State: closed - Opened by xlsun79 7 months ago
- 2 comments
Labels: bug, spike sorting
#876 - Hhmi notebook check
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
- 2 comments
#875 - Export logger
Pull Request -
State: closed - Opened by CBroz1 7 months ago
- 10 comments
Labels: enhancement, infrastructure
#874 - Tutorial notebook 32_Ripple_Detection uses non-included data
Issue -
State: closed - Opened by samuelbray32 7 months ago
- 2 comments
#873 - Spikesorting populate tries to use kilosort2 instead of mountainsort4
Issue -
State: closed - Opened by rpswenson 7 months ago
- 5 comments
#872 - Insertion error in fresh database
Issue -
State: open - Opened by samuelbray32 7 months ago
- 2 comments
Labels: bug, position, merge
#871 - Refine query of upstream tables on FigURL populate
Pull Request -
State: closed - Opened by CBroz1 7 months ago
- 11 comments
#870 - Tidy position
Pull Request -
State: closed - Opened by CBroz1 7 months ago
Labels: position
#869 - Instanced class for spike sorting merge helper method fails on bare key
Issue -
State: closed - Opened by CBroz1 7 months ago
- 2 comments
Labels: bug, spike sorting
#868 - Failed insertion for UnitWaveformFeaturesGroup
Issue -
State: closed - Opened by samuelbray32 7 months ago
- 6 comments
Labels: bug, decoding
#867 - Fix failing chains pytests
Pull Request -
State: closed - Opened by CBroz1 7 months ago
#866 - Special characters in DLC project naming
Issue -
State: open - Opened by CBroz1 7 months ago
Labels: enhancement, position
#865 - Deprecation factory requires import order
Issue -
State: open - Opened by CBroz1 7 months ago
Labels: bug, position
#864 - Bump version number
Pull Request -
State: closed - Opened by edeno 7 months ago
#863 - Fix non-referencing option in lfp artifact detection
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
#862 - LFP artifact referencing inconcistency
Issue -
State: closed - Opened by samuelbray32 7 months ago
- 1 comment
Labels: bug, LFP
#861 - Features to allow sharing of full pipeline and results for paper publication
Issue -
State: open - Opened by lfrank 7 months ago
- 22 comments
Labels: enhancement, infrastructure
#860 - Failed delete propagation through PositionGroup
Issue -
State: closed - Opened by samuelbray32 7 months ago
- 6 comments
Labels: bug, merge
#859 - Artifact interval bug
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
#858 - Spike sorting artifact detection populate error
Issue -
State: closed - Opened by rpswenson 7 months ago
- 6 comments
#857 - Make use of waveforms_dir consistent
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
- 1 comment
#856 - fix CuratedSpikeSorting insert with no curation
Pull Request -
State: closed - Opened by samuelbray32 7 months ago
#855 - Permission denied when inserting FigURL Curation Selection
Issue -
State: closed - Opened by rpswenson 7 months ago
- 2 comments
#853 - Fix `CurationV1.get_sorting`
Pull Request -
State: closed - Opened by khl02007 7 months ago
- 4 comments
#852 - Update spikeinterface version
Pull Request -
State: closed - Opened by khl02007 7 months ago
- 5 comments
#851 - Pytests round 2
Pull Request -
State: closed - Opened by CBroz1 7 months ago
- 1 comment
#850 - `LFPArtifactDetection` expects field missing from some defaults
Issue -
State: closed - Opened by CBroz1 7 months ago
Labels: bug, LFP
#849 - Populate should leave evidence of success state
Issue -
State: open - Opened by CBroz1 7 months ago
- 4 comments
Labels: enhancement, common
#848 - 'Insufficient privileges.', "INSERT, UPDATE command denied to user 'dhshin'@'169.230.191.82'
Issue -
State: closed - Opened by donghoon-shin 7 months ago
- 1 comment
#847 - Lacking `INSERT` permission on shared prefix
Issue -
State: closed - Opened by zoldello 8 months ago
- 8 comments
Labels: bug, infrastructure
#846 - Revise `dj_chains` for table -> merge -> merge downstream deletes
Pull Request -
State: closed - Opened by CBroz1 8 months ago
- 5 comments
#845 - kachery client not registered
Issue -
State: closed - Opened by rpswenson 8 months ago
- 11 comments
#844 - Update spike sorting V1 code and notebook to run sorters other than `mountainsort4`
Pull Request -
State: closed - Opened by donghoon-shin 8 months ago
- 5 comments
#843 - Permission denied when populating SpikeSortingRecording
Issue -
State: closed - Opened by donghoon-shin 8 months ago
- 4 comments
#842 - Reduce waveform config redundancy
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 3 comments
Labels: enhancement
#841 - Tested DLC multicam pipeline
Pull Request -
State: closed - Opened by samuelbray32 8 months ago
- 1 comment
#840 - Fix notebook name
Pull Request -
State: closed - Opened by edeno 8 months ago
#839 - Tensorflow downgrade required for DLC
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 1 comment
Labels: bug, position
#838 - Demo notebook error (`01_Insert_Data.ipynb`)
Issue -
State: closed - Opened by khl02007 8 months ago
- 1 comment
#837 - MUA detection notebooks not showing up in docs
Issue -
State: closed - Opened by edeno 8 months ago
- 1 comment
Labels: documentation
#836 - Error installing mountainsort4
Issue -
State: closed - Opened by rpswenson 8 months ago
- 2 comments
#835 - Fix test for update of position tools
Pull Request -
State: closed - Opened by edeno 8 months ago
#834 - Multicam DLC project support
Pull Request -
State: closed - Opened by edeno 8 months ago
#833 - Code stall when reading stdout in DLC pipeline
Issue -
State: closed - Opened by samuelbray32 8 months ago
Labels: bug, position
#832 - Proposed structure for user roles.
Pull Request -
State: closed - Opened by CBroz1 8 months ago
#831 - Failed environment build with mamba
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 5 comments
Labels: bug, position
#830 - Delete downstream merge fails to find all relevant Merge tables
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 8 comments
Labels: bug, merge
#829 - Single LED position being halved
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 2 comments
Labels: bug, position
#828 - gh-actions docs fixes
Pull Request -
State: closed - Opened by CBroz1 8 months ago
- 1 comment
#827 - Only apply include labels filter if include_labels not empty
Pull Request -
State: closed - Opened by samuelbray32 8 months ago
- 1 comment
#826 - Update CITATION.cff
Pull Request -
State: closed - Opened by edeno 8 months ago
- 1 comment
#825 - Create Trials table that corresponds to trials in the NWB file.
Issue -
State: open - Opened by edeno 8 months ago
Labels: enhancement, common
#824 - Fault-permit insert and remove mutual exclusivity protections on Merge
Pull Request -
State: closed - Opened by CBroz1 8 months ago
#823 - Create single notebook to demo spyglass
Issue -
State: closed - Opened by edeno 8 months ago
- 1 comment
Labels: documentation, enhancement
#822 - Revise dependencies
Pull Request -
State: closed - Opened by CBroz1 8 months ago
- 4 comments
#821 - Cautious delete bugfixes
Pull Request -
State: closed - Opened by CBroz1 8 months ago
#820 - Permission check session summary uses invalid downstream restriction
Issue -
State: closed - Opened by MichaelCoulter 8 months ago
- 1 comment
#819 - Minor decoding fixes
Pull Request -
State: closed - Opened by edeno 8 months ago
- 2 comments
#818 - Cautious delete logging error
Issue -
State: closed - Opened by edeno 8 months ago
- 2 comments
Labels: bug
#817 - Type error in ClusterlessDecodingV1 population
Issue -
State: closed - Opened by bsharma-hiprep 8 months ago
- 1 comment
Labels: bug, decoding
#816 - generate_curation_uri should have curation_label and merge_groups as optional
Issue -
State: open - Opened by zoldello 8 months ago
Labels: enhancement, spike sorting
#815 - Error in LFPOutput due to old parts
Issue -
State: closed - Opened by samuelbray32 8 months ago
- 21 comments
Labels: bug, merge
#814 - Update 41_Extracting_Clusterless_Waveform_Features.ipynb
Pull Request -
State: closed - Opened by MichaelCoulter 8 months ago
- 5 comments