Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / LorenFrankLab/spyglass issues and pull requests
#1016 - `ModuleNotFoundError` vs. `ImportError`
Issue -
State: closed - Opened by CBroz1 3 months ago
- 4 comments
Labels: bug
#1015 - Speed up fetch_nwb
Pull Request -
State: closed - Opened by samuelbray32 3 months ago
- 3 comments
#1014 - Remove kachery_client dependency
Pull Request -
State: closed - Opened by samuelbray32 3 months ago
#1013 - Outdated import (?)
Issue -
State: closed - Opened by samuelbray32 3 months ago
Labels: bug
#1012 - Spikesorting Unit Annotation
Issue -
State: closed - Opened by samuelbray32 3 months ago
Labels: enhancement, spike sorting
#1011 - remove problem key in DLCPosV1 fetch_nwb attrs
Pull Request -
State: closed - Opened by samuelbray32 3 months ago
#1010 - SQL error in DLCPosV1.fetch_nwb()
Issue -
State: closed - Opened by samuelbray32 3 months ago
Labels: bug, position
#1009 - Fix artifact `list_triggers`
Pull Request -
State: closed - Opened by khl02007 3 months ago
- 3 comments
#1008 - Add upsampling option to PositionGroup
Pull Request -
State: closed - Opened by samuelbray32 3 months ago
- 1 comment
#1007 - Can't correspond waveforms to spike times
Issue -
State: open - Opened by rsnevers 3 months ago
- 5 comments
Labels: spike sorting
#1006 - Upsample DLC Position
Issue -
State: closed - Opened by samuelbray32 4 months ago
Labels: enhancement, position
#1005 - merged_sorting_extractor not found
Issue -
State: open - Opened by jguides 4 months ago
- 4 comments
#1004 - Fix bug in change in analysis_file object_id
Pull Request -
State: closed - Opened by samuelbray32 4 months ago
#1003 - Remove classes for usused tables
Pull Request -
State: closed - Opened by CBroz1 4 months ago
- 4 comments
#1002 - Prevent delete orphans
Pull Request -
State: closed - Opened by CBroz1 4 months ago
- 14 comments
#1001 - Non-daemon parallel populate
Pull Request -
State: closed - Opened by samuelbray32 4 months ago
- 1 comment
#1000 - Multiprocess populate when make function uses parallelization
Issue -
State: closed - Opened by samuelbray32 4 months ago
- 3 comments
Labels: enhancement, infrastructure
#999 - Minor fixes
Pull Request -
State: closed - Opened by samuelbray32 4 months ago
- 1 comment
#998 - Mua notebook
Pull Request -
State: closed - Opened by denissemorales 4 months ago
- 3 comments
#997 - Add Common Errors doc
Pull Request -
State: closed - Opened by CBroz1 4 months ago
#996 - Add docstrings to SortedSpikesGroup and Decoding methods
Pull Request -
State: closed - Opened by samuelbray32 4 months ago
#995 - Resolve case of shared file use in multiple Dandisets
Issue -
State: open - Opened by samuelbray32 4 months ago
Labels: enhancement, infrastructure
#994 - Add ability to set smoothing sigma in get_firing_rate
Pull Request -
State: closed - Opened by samuelbray32 4 months ago
#993 - Give UUID to artifact interval
Pull Request -
State: closed - Opened by khl02007 4 months ago
- 13 comments
#992 - Insert session from Dandi
Issue -
State: open - Opened by samuelbray32 4 months ago
Labels: enhancement, infrastructure
#991 - AnalysisNwbfileLog requires insert/delete privileges for read-only users
Issue -
State: closed - Opened by CBroz1 4 months ago
- 1 comment
Labels: infrastructure
#990 - argument error in notebook
Issue -
State: closed - Opened by samuelbray32 4 months ago
Labels: bug
#989 - Length mismatch for upsampled data in `fill_nan`
Issue -
State: open - Opened by CBroz1 4 months ago
- 2 comments
Labels: bug, position
#988 - Automated pytests of position pipeline in GitHub actions
Issue -
State: closed - Opened by CBroz1 4 months ago
Labels: wontfix
#987 - `IntegrityError` or foreign key error when inserting into table
Issue -
State: closed - Opened by xlsun79 4 months ago
- 1 comment
Labels: invalid, question
#986 - Implement `spikesorting.v1.MetricCuration.get_waveforms`
Issue -
State: open - Opened by CBroz1 5 months ago
Labels: enhancement, spike sorting
#985 - Check existence of optional fields during `Electrode` table population
Pull Request -
State: closed - Opened by khl02007 5 months ago
#984 - `dj_graph` prompt to spawn missing classes
Issue -
State: open - Opened by CBroz1 5 months ago
Labels: enhancement, infrastructure
#983 - Don't insert lab member when creating lab team
Pull Request -
State: closed - Opened by khl02007 5 months ago
- 5 comments
#982 - Replace old `join` call with `cascade`
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#981 - 'TableChain' object has no attribute 'join'
Issue -
State: closed - Opened by xlsun79 5 months ago
- 1 comment
#980 - Insufficient varchar length for `AnalysisNwbfileLog.table`
Issue -
State: closed - Opened by CBroz1 5 months ago
- 2 comments
Labels: common
#979 - Fix name parsing
Pull Request -
State: closed - Opened by khl02007 5 months ago
- 7 comments
#978 - generate merge suggestions for all sorted clusters
Issue -
State: open - Opened by MichaelCoulter 5 months ago
- 5 comments
Labels: enhancement, spike sorting
#977 - Merge duplicate funcs
Issue -
State: open - Opened by CBroz1 5 months ago
- 4 comments
Labels: enhancement
#976 - Remove unused tables
Issue -
State: closed - Opened by CBroz1 5 months ago
- 7 comments
Labels: Database
#975 - Cleanup of dlc video
Pull Request -
State: closed - Opened by samuelbray32 5 months ago
- 2 comments
#974 - DLC Centroid populate error with spatial_series
Issue -
State: closed - Opened by rpswenson 5 months ago
- 5 comments
#973 - Allow dlc pipeline to run without prior position tracking
Pull Request -
State: closed - Opened by edeno 5 months ago
#972 - Revert "Allow dlc pipeline to run without prior position tracking"
Pull Request -
State: closed - Opened by edeno 5 months ago
#971 - Fix test fails related to #957
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#970 - Allow dlc pipeline to run without prior position tracking
Pull Request -
State: closed - Opened by samuelbray32 5 months ago
- 1 comment
#969 - Permit multiple restrict_by
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#968 - Fix relative pathing for mkdocstrings>=1.9.1
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#967 - Fix tests/doc build
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#966 - Add pytests to position
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#965 - Inserting nwb file without trodes tracking leads to no entries in RawPosition
Issue -
State: closed - Opened by rpswenson 5 months ago
- 1 comment
#964 - `01_Insert_Data.ipynb` assumes lab member name will be inserted via nwb
Issue -
State: closed - Opened by shijiegu 5 months ago
- 1 comment
#963 - Peripheral tables cause issues: deletes, field name uniqueness, etc.
Issue -
State: closed - Opened by CBroz1 5 months ago
Labels: wontfix, common, infrastructure
#962 - Incorrect Delete propagation in decoding
Issue -
State: closed - Opened by samuelbray32 5 months ago
- 4 comments
Labels: bug, infrastructure
#961 - Potential Errors: analysis_file name
Issue -
State: closed - Opened by samuelbray32 5 months ago
- 1 comment
Labels: question
#960 - QuickFix: Bug in curation v0 make
Pull Request -
State: closed - Opened by samuelbray32 5 months ago
#959 - Bug in Spikesorting v0 curation
Issue -
State: closed - Opened by samuelbray32 5 months ago
Labels: bug, spike sorting
#958 - SpikeSortingRecording Populate Error
Issue -
State: closed - Opened by denissemorales 5 months ago
- 3 comments
Labels: question
#957 - Transaction on `populate_all_common`
Pull Request -
State: closed - Opened by CBroz1 5 months ago
- 1 comment
#956 - Dandi export and read
Pull Request -
State: closed - Opened by samuelbray32 5 months ago
- 5 comments
#955 - Fix bug report template html
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#954 - Insufficient privileges.', "INSERT command denied to user for my custom table
Issue -
State: closed - Opened by shijiegu 5 months ago
- 14 comments
Labels: Database
#953 - Uniqueness of object_ids in generated analysis nwb files
Issue -
State: closed - Opened by samuelbray32 5 months ago
- 3 comments
Labels: bug, enhancement
#952 - error inserting session: 'str' object has no attribute 'get_space'
Issue -
State: closed - Opened by magland 5 months ago
- 2 comments
#951 - `delete_downstream_merge` should capture all parts with fk-refs
Issue -
State: closed - Opened by MichaelCoulter 5 months ago
- 4 comments
Labels: infrastructure
#950 - Running DLC Pose Estimation without RawPosition
Issue -
State: closed - Opened by rpswenson 5 months ago
- 11 comments
Labels: enhancement, position
#949 - Long distance restrictions
Pull Request -
State: closed - Opened by CBroz1 5 months ago
- 3 comments
#948 - Delete should prevent orphans in externals and `IntervalList`
Issue -
State: closed - Opened by xlsun79 5 months ago
- 2 comments
Labels: enhancement, infrastructure
#947 - WIP: support .nwb.lindi.json files
Pull Request -
State: closed - Opened by magland 5 months ago
- 3 comments
#946 - Part delete edits
Pull Request -
State: closed - Opened by CBroz1 5 months ago
- 1 comment
#945 - Add system requirements and typical installation time
Pull Request -
State: closed - Opened by edeno 5 months ago
#944 - broken link in docs
Issue -
State: open - Opened by magland 5 months ago
#943 - `IntervalList` cautious insert
Pull Request -
State: closed - Opened by CBroz1 5 months ago
- 5 comments
#942 - Ambiguous table name on `increment_access` during `fetch_nwb`
Issue -
State: open - Opened by CBroz1 5 months ago
#941 - Log when file accessed
Pull Request -
State: closed - Opened by CBroz1 5 months ago
#940 - Fix bug on empty delete in merge table
Pull Request -
State: closed - Opened by samuelbray32 5 months ago
#939 - CurationV1 does not track a metrics source.
Issue -
State: open - Opened by samuelbray32 6 months ago
- 1 comment
Labels: spike sorting
#938 - Spikeinterface parameter name change
Issue -
State: closed - Opened by samuelbray32 6 months ago
Labels: bug, spike sorting
#937 - Add logging of AnalysisNwbfile creation time and file size
Pull Request -
State: closed - Opened by CBroz1 6 months ago
- 2 comments
Labels: infrastructure
#936 - Tutorial notebook demo database
Issue -
State: open - Opened by samuelbray32 6 months ago
- 1 comment
Labels: documentation, enhancement
#935 - Add `hatch` developer instructions to docs
Issue -
State: open - Opened by CBroz1 6 months ago
Labels: documentation, enhancement
#934 - Implement adding data from config file
Pull Request -
State: closed - Opened by calderast 6 months ago
- 4 comments
Labels: infrastructure
#933 - `TableChains` cannot process edge from alias to DLCCentroid
Issue -
State: closed - Opened by CBroz1 6 months ago
- 2 comments
#932 - Uneeded error when delete on empty restriction in merge table
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 1 comment
Labels: bug, merge
#931 - Cannot delete or update a parent row when deleting tables that have downstream merge tables
Issue -
State: closed - Opened by xlsun79 6 months ago
- 6 comments
Labels: infrastructure
#930 - Mixin method to restrict table by keys of upstream tables
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
- 3 comments
Labels: infrastructure
#929 - Fix improper uses of strip
Pull Request -
State: closed - Opened by edeno 6 months ago
#928 - Artifact detection across sort groups
Issue -
State: open - Opened by CBroz1 6 months ago
Labels: enhancement, spike sorting
#927 - State script file to unix timeframe
Issue -
State: open - Opened by CBroz1 6 months ago
- 2 comments
Labels: enhancement, common
#926 - Deprecate use of env variables when loading config
Issue -
State: open - Opened by CBroz1 6 months ago
Labels: enhancement, infrastructure
#925 - Quickfix for removal of old kachery tables
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
#924 - Improper restriction of merge tables during delete in spikesortingv1
Issue -
State: closed - Opened by samuelbray32 6 months ago
Labels: bug, spike sorting, merge
#923 - General-purporse key lookup tool(s) for buried primary keys
Issue -
State: closed - Opened by CBroz1 6 months ago
- 3 comments
Labels: enhancement, infrastructure
#922 - Check for entry in merge part table prior to insert
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
#921 - Metric Curation Populate inhomogeneous shape for probe data
Issue -
State: closed - Opened by rpswenson 6 months ago
- 10 comments
Labels: spike sorting
#920 - Duplicate entries created in Merge table
Issue -
State: closed - Opened by samuelbray32 6 months ago
- 1 comment
Labels: bug, spike sorting, merge
#919 - Implementation of import config
Issue -
State: closed - Opened by samuelbray32 6 months ago
Labels: enhancement, infrastructure
#918 - Kachery fixes
Pull Request -
State: closed - Opened by samuelbray32 6 months ago
#917 - Recompute method in computed tables
Issue -
State: open - Opened by lfrank 6 months ago
- 3 comments
Labels: enhancement, infrastructure