Ecosyste.ms: Issues

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GitHub / LaraFuhrmann/VILOCA issues and pull requests

#28 - Feat wp1.2

Pull Request - State: closed - Opened by spaceben over 1 year ago

#27 - Add pooled samples mode

Pull Request - State: closed - Opened by spaceben over 1 year ago

#26 - add win_min_ext to commandline argument

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#25 - remove warning for hard clipping to improve runtime

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#24 - fix(b2w): indel at same pos

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#23 - clean up + update installation instructions

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#22 - Feat none type qualities

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#21 - add min_windows_coverage as command line argument

Pull Request - State: closed - Opened by LaraFuhrmann over 1 year ago

#20 - Fixing Python installation path for CMake

Pull Request - State: closed - Opened by DrYak over 1 year ago

#19 - Cmakeification

Pull Request - State: closed - Opened by DrYak over 1 year ago

#18 - Feat wp1.1

Pull Request - State: closed - Opened by spaceben almost 2 years ago

#16 - feat(b2w): support hard clipped reads

Pull Request - State: closed - Opened by spaceben almost 2 years ago

#15 - feat(b2w): support hard clipped reads

Pull Request - State: closed - Opened by spaceben almost 2 years ago

#14 - feat(b2w): support hard clipped reads

Pull Request - State: closed - Opened by spaceben almost 2 years ago - 1 comment

#13 - Master copy

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago

#12 - TEST: Feature vi aug11 merge to master

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago

#11 - Merge master into feature-VI-Aug11-merge-to-master

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago - 1 comment

#10 - Feature VI (learn_error_params + use_quality_scores) [status 2022Aug11]

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago - 2 comments

#9 - Updating b2w

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago - 2 comments

#8 - Extended window mode: Pre-processing

Pull Request - State: closed - Opened by spaceben almost 2 years ago - 1 comment

#7 - allow CIGAR encoding with code 7 and 8

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago - 1 comment

#6 - add haplotype_id to co-occurring mutations

Pull Request - State: closed - Opened by LaraFuhrmann almost 2 years ago

#5 - [WIP] Feat WP1.1

Pull Request - State: closed - Opened by spaceben almost 2 years ago

#4 - [CI] Fix tests

Pull Request - State: closed - Opened by spaceben about 2 years ago - 3 comments

#3 - Inference mfa looser convergence

Pull Request - State: closed - Opened by LaraFuhrmann over 2 years ago

#2 - Merge master to feature-new-inference

Pull Request - State: closed - Opened by LaraFuhrmann over 2 years ago

#1 - Switch to poetry

Pull Request - State: closed - Opened by LaraFuhrmann over 2 years ago