Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / LFPy/LFPykit issues and pull requests

#194 - Fixes bug in line source calculation

Pull Request - State: closed - Opened by joseph-tharayil 7 months ago - 5 comments

#193 - Download NYheadmodel files automatically

Issue - State: closed - Opened by espenhgn over 1 year ago

#192 - Download NY Head model files automatically if missing

Pull Request - State: closed - Opened by torbjone over 1 year ago - 1 comment

#189 - Add `pyproject.toml` file

Issue - State: open - Opened by espenhgn almost 2 years ago
Labels: enhancement

#188 - bump v0.5rc0 to v0.5

Pull Request - State: closed - Opened by espenhgn almost 2 years ago
Labels: release

#187 - Prep LFPykit-0.5rc0 release

Pull Request - State: closed - Opened by espenhgn almost 2 years ago

#186 - Release current main branch as LFPykit-0.5

Issue - State: closed - Opened by espenhgn almost 2 years ago
Labels: release

#185 - signal predictions from axial currents

Issue - State: open - Opened by espenhgn over 2 years ago
Labels: enhancement

#184 - download sa_nyhead.mat to CWD

Pull Request - State: closed - Opened by espenhgn over 2 years ago

#183 - Download location for `sa_nyhead.mat`

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: bug

#182 - Fix for issue #172

Pull Request - State: closed - Opened by torbjone over 2 years ago
Labels: enhancement

#181 - add classes CellGeometryArbor, CellGeometryNeuron, CellGeometryLFPyPt3d

Pull Request - State: open - Opened by espenhgn over 2 years ago
Labels: enhancement

#180 - Remove deprecated MEG class

Pull Request - State: closed - Opened by espenhgn over 2 years ago

#179 - Add submodule with special classes for Arbor and Neuron/LFPy+pt3d

Issue - State: open - Opened by espenhgn over 2 years ago - 1 comment
Labels: enhancement, no-issue-activity

#178 - NEURON + .swc example

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#177 - Add LFPy+swc example, update corresponding Arbor example

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#176 - improved pt3d example

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#175 - Improve LFPy pt3d example(s)

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#174 - git commit -m "classes now inherit abc.ABC"

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#173 - Remove deprecated class `eegmegcalc.MEG`

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#172 - Tolerances in `lfpcalc.calc_*_moi` and `lfpcalc.calc_*_anisotropic` methods

Issue - State: closed - Opened by espenhgn over 2 years ago - 2 comments
Labels: enhancement

#171 - Avoid np.where

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#170 - Reduce use of `np.where`

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#169 - Replace indexing using `np.where` by fancy indexing

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#168 - ABC

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#167 - remove python-3.6 support

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#166 - Unsupport Python-3.6

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#165 - replace Lintly badge

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: bug fix

#164 - Replace Lintly badge

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: bug

#163 - replace lintly action with one that works

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: bug fix

#162 - Replace Lintly action

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: bug

#161 - `lfpycalc.lfpcalc.calc_lfp_*` methods no longer not take `cell` as input

Pull Request - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#160 - `lfpycalc.lfpcalc.calc_lfp_*` methods should not take `cell` as input

Issue - State: closed - Opened by espenhgn over 2 years ago
Labels: enhancement

#159 - Fix performance issues

Pull Request - State: open - Opened by espenhgn over 2 years ago - 1 comment
Labels: no-pr-activity

#158 - Incorporate internally consistent probe and source coordinates

Issue - State: open - Opened by espenhgn over 2 years ago - 1 comment
Labels: enhancement, no-issue-activity

#157 - Bump version to 0.4

Pull Request - State: closed - Opened by espenhgn almost 3 years ago
Labels: release

#156 - Release 0.4

Issue - State: closed - Opened by espenhgn almost 3 years ago - 1 comment
Labels: release

#155 - make sure examples run

Issue - State: closed - Opened by espenhgn almost 3 years ago
Labels: enhancement

#154 - rerendered examples

Pull Request - State: closed - Opened by espenhgn almost 3 years ago

#153 - Improve performance

Issue - State: open - Opened by espenhgn almost 3 years ago - 1 comment
Labels: enhancement, no-issue-activity

#152 - run tests against Python 3.10

Issue - State: closed - Opened by espenhgn almost 3 years ago - 1 comment
Labels: enhancement

#151 - Fix 149 mod

Pull Request - State: closed - Opened by torbjone almost 3 years ago - 7 comments

#150 - Fix prediction errors with `FourSphereVolumeConductor` with offset dipoles

Pull Request - State: closed - Opened by espenhgn almost 3 years ago
Labels: bug fix

#149 - FourSphereVolumeConductor bug

Issue - State: closed - Opened by espenhgn almost 3 years ago
Labels: bug

#148 - Updates for [email protected]

Pull Request - State: closed - Opened by espenhgn almost 3 years ago
Labels: enhancement

#147 - Update examples for Arbor-v0.6

Issue - State: closed - Opened by espenhgn almost 3 years ago
Labels: enhancement

#146 - How to apply LFPykit on more than one neuron

Issue - State: open - Opened by llandsmeer almost 3 years ago - 20 comments
Labels: question, no-issue-activity

#145 - updated SphericallySymmetricVolCondMEG docstring

Pull Request - State: closed - Opened by espenhgn about 3 years ago
Labels: documentation

#144 - SphericallySymmetricVolCondMEG documentation issue

Issue - State: closed - Opened by espenhgn about 3 years ago
Labels: documentation

#143 - add InfiniteHomogeneousVolCondMEG.calculate_B method

Pull Request - State: closed - Opened by espenhgn about 3 years ago
Labels: enhancement

#142 - class SphericallySymmetricVolCondMEG; MEG->InfiniteHomogeneousVolCondMEG

Pull Request - State: closed - Opened by espenhgn about 3 years ago

#141 - add `InfiniteHomogeneousVolCondMEG.calculate_B` method

Issue - State: closed - Opened by espenhgn about 3 years ago
Labels: enhancement

#140 - Incorporate Eq. 34 p. 429 in Hamalainen 1993

Issue - State: closed - Opened by espenhgn about 3 years ago
Labels: enhancement

#138 - bumped version to 0.3.1

Pull Request - State: closed - Opened by espenhgn over 3 years ago

#137 - release v0.3.1

Issue - State: closed - Opened by espenhgn over 3 years ago - 1 comment
Labels: release

#136 - fixes for Arbor 0.5.2 release

Pull Request - State: closed - Opened by espenhgn over 3 years ago
Labels: bug fix

#135 - Arbor 0.5.2 breaks example notebooks

Issue - State: closed - Opened by espenhgn over 3 years ago
Labels: bug

#134 - fixed ValueError

Pull Request - State: closed - Opened by espenhgn over 3 years ago
Labels: bug fix

#133 - Example_LFPy_pt3d.ipynb is broken

Issue - State: closed - Opened by espenhgn over 3 years ago

#132 - Add more comprehensive example(s) comparing all the forward models

Issue - State: open - Opened by espenhgn over 3 years ago - 1 comment
Labels: enhancement, no-issue-activity

#131 - fix locset syntax

Pull Request - State: closed - Opened by espenhgn over 3 years ago

#130 - Example_Arbor.ipynb doesn't work with Arbor@master

Issue - State: closed - Opened by espenhgn over 3 years ago
Labels: bug

#129 - add simple example using Arbor and .swc morphology file

Pull Request - State: closed - Opened by espenhgn over 3 years ago

#128 - updated action to stale@v3

Pull Request - State: closed - Opened by espenhgn over 3 years ago
Labels: bug fix

#127 - Fix broken Stale action

Issue - State: closed - Opened by espenhgn over 3 years ago
Labels: bug

#126 - updated to arbor@master

Pull Request - State: closed - Opened by espenhgn over 3 years ago

#125 - Update example examples/Example_Arbor.ipynb

Issue - State: closed - Opened by espenhgn over 3 years ago

#124 - Docstring example fixes

Pull Request - State: closed - Opened by espenhgn over 3 years ago

#123 - Fix outdated docstrings

Issue - State: closed - Opened by espenhgn over 3 years ago
Labels: documentation

#122 - Volumetric contacts for RecExtElectrode class

Issue - State: open - Opened by espenhgn over 3 years ago - 1 comment
Labels: enhancement, no-issue-activity

#121 - Add NEURON/LFPy/Arbor examples demonstrating use cases using morphologies on .swc file format

Issue - State: closed - Opened by espenhgn almost 4 years ago - 2 comments
Labels: enhancement, no-issue-activity

#120 - Release 0.3

Pull Request - State: closed - Opened by espenhgn almost 4 years ago
Labels: release

#119 - 90 days for issues to go stale, 30 days before closing

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#118 - updated docstring example

Pull Request - State: closed - Opened by espenhgn almost 4 years ago
Labels: documentation

#117 - Fix docstrings etc. that use LFPy<2.2 syntax

Issue - State: closed - Opened by espenhgn almost 4 years ago

#116 - switch to Super-Linter action

Pull Request - State: closed - Opened by espenhgn almost 4 years ago - 1 comment

#115 - Replace Lintly/flake8 action

Issue - State: closed - Opened by espenhgn almost 4 years ago - 1 comment
Labels: no-issue-activity

#114 - add too-long line

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#113 - Pull request target

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#112 - test pull_request_target

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#111 - Add example for Brian2

Issue - State: closed - Opened by espenhgn almost 4 years ago - 1 comment
Labels: no-issue-activity

#110 - Fix for z_shift

Pull Request - State: closed - Opened by torbjone almost 4 years ago - 4 comments
Labels: bug fix

#109 - 0.3rc1 version bump

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#108 - Prep release 0.3

Issue - State: closed - Opened by espenhgn almost 4 years ago
Labels: release

#107 - Add conda-forge install/release info

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#106 - add coveralls

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#105 - removed travisci test script

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#104 - Setup Coveralls action

Issue - State: closed - Opened by espenhgn almost 4 years ago

#103 - get rid of Travis-CI - use GitHub Action "Python Application" instead

Pull Request - State: closed - Opened by espenhgn almost 4 years ago

#102 - Migrate to TravisCI.com or some other CI

Issue - State: closed - Opened by espenhgn almost 4 years ago - 1 comment

#101 - turned refs to [email protected] into LFPy@master

Pull Request - State: closed - Opened by espenhgn almost 4 years ago
Labels: bug fix

#100 - bumped version to 0.2, documentation fixes

Pull Request - State: closed - Opened by espenhgn almost 4 years ago
Labels: release

#99 - Release LFPykit-0.2

Issue - State: closed - Opened by espenhgn almost 4 years ago
Labels: release

#98 - package test scripts

Pull Request - State: closed - Opened by espenhgn almost 4 years ago
Labels: bug fix

#93 - Arbor example

Pull Request - State: closed - Opened by espenhgn about 4 years ago
Labels: enhancement

#47 - Variable diameter segments (Arbor)

Issue - State: closed - Opened by espenhgn about 4 years ago - 2 comments
Labels: enhancement, no-issue-activity

#23 - Example - Arbor

Issue - State: closed - Opened by espenhgn about 4 years ago - 2 comments
Labels: enhancement