Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / LBL-EESA/alquimia-dev issues and pull requests

#92 - iso_c_binding to latest version

Pull Request - State: closed - Opened by smolins 8 months ago

#90 - updated to pflotran v5.0.0 and petsc 3.20.0

Pull Request - State: closed - Opened by ghammond86 9 months ago

#89 - Refactor PFLOTRAN interface

Pull Request - State: closed - Opened by ghammond86 10 months ago - 2 comments

#88 - Upgrade to interface to handle gases explicitly

Pull Request - State: closed - Opened by smolins 10 months ago

#87 - undefined behavior in pflotran interface

Pull Request - State: closed - Opened by ecoon about 1 year ago - 1 comment

#85 - cleaned up crunch os3d

Pull Request - State: closed - Opened by smolins about 1 year ago

#84 - Add ability to accept an identifier and a verbosity level/flag

Issue - State: open - Opened by ecoon about 1 year ago

#82 - update readme.rst

Pull Request - State: closed - Opened by smolins almost 2 years ago

#81 - update CI to petsc-v3.18.0

Pull Request - State: closed - Opened by smolins almost 2 years ago

#80 - updates for pflotran v4

Pull Request - State: closed - Opened by ghammond86 almost 2 years ago - 1 comment

#79 - Inconsistent include path in cmake package

Issue - State: open - Opened by wspear almost 2 years ago - 2 comments

#78 - New Continuous Integration

Pull Request - State: closed - Opened by smolins over 2 years ago

#77 - clarified README.rst

Pull Request - State: closed - Opened by smolins over 2 years ago

#76 - Updates to LICENCE and README after new Software Disclosure

Pull Request - State: closed - Opened by smolins almost 3 years ago

#74 - documentation table fix

Pull Request - State: closed - Opened by smolins about 3 years ago

#73 - valgrind conditional jump on uninitialized value

Issue - State: open - Opened by ecoon about 3 years ago

#71 - bug fix: deallocate stmp in crunchflow interface

Pull Request - State: closed - Opened by smolins over 3 years ago

#70 - added non convergence for pflotran

Pull Request - State: closed - Opened by smolins over 3 years ago

#69 - case sensitive functionality

Issue - State: open - Opened by smolins almost 4 years ago

#68 - alquimia needs to be consistent with CrunchFlow case choice for condi…

Pull Request - State: closed - Opened by smolins almost 4 years ago

#67 - fix issue w/ linking multipass function: use mpicxx, petsc now requir…

Pull Request - State: closed - Opened by smolins almost 4 years ago

#66 - proper include of PETSc

Issue - State: closed - Opened by ecoon almost 4 years ago - 7 comments

#65 - update to petsc v13.3

Pull Request - State: closed - Opened by smolins almost 4 years ago

#64 - Updates to make interface compatible with PFLOTRAN v3.0 + PETSc v3.11

Pull Request - State: closed - Opened by ghammond86 almost 4 years ago

#63 - added stable to travis ci

Pull Request - State: closed - Opened by smolins about 4 years ago

#62 - pflotran reverted TranConstraintReadRT back to TranConstraintRead

Pull Request - State: closed - Opened by balay almost 5 years ago - 1 comment

#61 - new petsc gitlab repository

Pull Request - State: closed - Opened by smolins almost 5 years ago - 2 comments

#60 - Crunch only

Pull Request - State: closed - Opened by jbeisman almost 5 years ago

#59 - fix pflotran (15da287) interface: TranConstraintRead to TranConstrain…

Pull Request - State: closed - Opened by smolins about 5 years ago

#58 - fix pflotran compatibility wrt TranConstraintRead -> TranConstraintReadRT

Pull Request - State: closed - Opened by balay about 5 years ago

#57 - fixes crunchflow tests and adds crunchflow as engine in travisCI

Pull Request - State: closed - Opened by smolins about 5 years ago

#56 - fix pflotran compatibility wrt requires_equilibration -> equilibrate_at_each_cell

Pull Request - State: closed - Opened by balay over 5 years ago - 2 comments

#55 - pflotran needs hdf5

Pull Request - State: closed - Opened by smolins over 5 years ago

#54 - added DEBUG, uninstall oclint, use gcc/7, use travis_wait

Pull Request - State: closed - Opened by smolins almost 6 years ago

#53 - brew installs, debugging variable

Pull Request - State: closed - Opened by smolins almost 6 years ago - 1 comment

#52 - fix compile errors with pflotran master branch

Pull Request - State: closed - Opened by balay almost 6 years ago - 3 comments

#51 - Compile time error with Spack

Issue - State: closed - Opened by keitat about 6 years ago - 1 comment

#50 - Missing lapack library

Issue - State: open - Opened by lipnikov over 6 years ago

#49 - Problem with GCC-4.8.4 on BG/Q, missing DL functions?

Issue - State: open - Opened by keitat almost 7 years ago

#48 - fixed issue with ion exchange in crunchflow, changed CF ReacOperSplit…

Pull Request - State: closed - Opened by smolins almost 7 years ago

#47 - Modified CMakeLists to work with spack

Pull Request - State: closed - Opened by amklinv over 7 years ago - 1 comment

#46 - Travis mac mpi

Pull Request - State: closed - Opened by smolins over 7 years ago - 1 comment

#45 - Updates to make Alquimia compatible with pflotran-xsdk

Pull Request - State: closed - Opened by ghammond86 over 7 years ago

#44 - updated crunchflow interface: StartTope

Pull Request - State: closed - Opened by smolins over 7 years ago

#43 - fixed copy of properties, aux data, added stuff to printState

Pull Request - State: closed - Opened by smolins over 7 years ago

#42 - copying properties from alquimia in ReactionStepOperatorSplit

Pull Request - State: closed - Opened by smolins over 7 years ago

#41 - add logic to prevent rpath directives on static builds

Pull Request - State: closed - Opened by sarich about 8 years ago
Labels: bug

#40 - Updates the version of PFLOTRAN supported by Alquimia

Pull Request - State: closed - Opened by bishtgautam about 8 years ago - 3 comments

#39 - Generalizing PETSc flags to be appended at the end of Alquimia's link…

Pull Request - State: closed - Opened by jeff-cohere about 8 years ago
Labels: 3rdparty

#38 - Adds status of Travis CI

Pull Request - State: closed - Opened by bishtgautam about 8 years ago

#37 - Changed PETSc manual configuration at Barry's request.

Pull Request - State: closed - Opened by jeff-cohere about 8 years ago
Labels: 3rdparty

#36 - Added CMake arguments to support explicit specification of PETSc lib/include paths

Pull Request - State: closed - Opened by jeff-cohere about 8 years ago
Labels: 3rdparty

#35 - Refactored batch_chem driver, added resizing functions to containers.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 2 comments
Labels: enhancement, cleanup

#34 - Added auxiliary output to transport driver.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug

#33 - Release versioning/copyright updates.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago

#32 - Adding test_install target for post-installation sanity checking.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: testing

#31 - Fixed some issues related to shared libraries, plus some memory errors.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug

#30 - Add support for XSDK defaults (SDK-68)

Pull Request - State: closed - Opened by bartlettroscoe over 8 years ago

#29 - I am the evil one.

Pull Request - State: closed - Opened by jwillenbring over 8 years ago

#28 - Using find_package(PETSc) instead of non-standard CMake checks.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: 3rdparty

#27 - Changed use of !PETSC_VERSION_RELEASE to +#if PETSC_VERSION_GE(3,7,0)…

Pull Request - State: closed - Opened by BarrySmith over 8 years ago
Labels: 3rdparty

#26 - Barry's fixes for pflotran stub library + Mac static builds.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug, 3rdparty

#25 - Add pflotran_petsc_stubs as an installed library

Pull Request - State: closed - Opened by BarrySmith over 8 years ago - 1 comment
Labels: bug

#24 - Shared library support is broken on Macs

Issue - State: open - Opened by jeff-cohere over 8 years ago - 2 comments
Labels: bug

#23 - Fixed a glitch in 'make install', added to Travis configuration.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug

#22 - Use of PETScConfig.cmake in other packages CMake

Issue - State: closed - Opened by BarrySmith over 8 years ago - 1 comment
Labels: 3rdparty

#21 - Fixing README.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: cleanup

#20 - Fixes and workarounds to allow Alquimia to use PETSc 3.6+ and PETSc dev.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: 3rdparty, testing

#19 - Add support for latest PETSc master version

Pull Request - State: closed - Opened by BarrySmith over 8 years ago
Labels: 3rdparty

#18 - Linux support for shared libraries, plus continuous integration

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: bug, testing

#17 - PFlotran engine needs to be updated to a more recent version

Issue - State: open - Opened by jeff-cohere over 8 years ago - 5 comments
Labels: enhancement, 3rdparty

#16 - Alquimia should be buildable as a shared library.

Issue - State: closed - Opened by jeff-cohere over 8 years ago - 18 comments
Labels: enhancement

#15 - Added a 1D transport driver for benchmarking

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: enhancement

#14 - Introducing a "hands-off" mode that takes input directly from an engine input file

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 3 comments
Labels: enhancement

#13 - Alquimia doesn't reliably compute pH

Issue - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug

#12 - Ensuring that Alquimia library is always built as a static library.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: bug

#11 - Minor fixes for building Alquimia.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: bug

#10 - Fixes and instructions for CrunchFlow chemistry engine.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 8 comments
Labels: bug, cleanup

#9 - Minor interface cleanup and additional utility functions.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 3 comments
Labels: enhancement, cleanup

#8 - Add an interface for supporting globally implicit reactive transport.

Issue - State: open - Opened by jeff-cohere over 8 years ago - 2 comments
Labels: enhancement

#7 - Add a 1D transport driver for benchmarking

Issue - State: closed - Opened by jeff-cohere over 8 years ago
Labels: enhancement

#6 - Finish Windows support

Issue - State: open - Opened by jeff-cohere over 8 years ago
Labels: enhancement

#5 - CrunchFlow engine needs to be tested

Issue - State: closed - Opened by jeff-cohere over 8 years ago - 1 comment
Labels: 3rdparty

#4 - Batch chemistry driver needs to be simplified

Issue - State: closed - Opened by jeff-cohere over 8 years ago
Labels: cleanup

#3 - Need to merge in "handsoff" branch to support 1D transport driver.

Issue - State: closed - Opened by jeff-cohere over 8 years ago
Labels: enhancement

#2 - Some code cleanup before Alquimia hits primetime.

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago - 2 comments
Labels: cleanup

#1 - New CMake build/test system, bugfix for PFlotran engine

Pull Request - State: closed - Opened by jeff-cohere over 8 years ago
Labels: bug, enhancement, cleanup