Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / KlausVigo/phangorn issues and pull requests

#73 - Internal nodes as returned by ancestral.pars

Issue - State: closed - Opened by ndrubins over 5 years ago - 2 comments

#72 - Phangorn installation issue on R 3.5.3+ (incl. 3.6.0)

Issue - State: closed - Opened by jananiravi over 5 years ago - 4 comments

#71 - Describing how to install Biostrings and seqLogo

Pull Request - State: closed - Opened by lskatz over 5 years ago - 3 comments

#70 - Rstudio crash without an error when running SH test in Phangorn

Issue - State: closed - Opened by Nirsha23 over 5 years ago - 5 comments

#69 - optim.pml error

Issue - State: open - Opened by Neutrino1234 over 5 years ago - 2 comments

#68 - getClans after midpoint rooting

Issue - State: closed - Opened by manu-kg over 5 years ago - 1 comment

#67 - read.phyDat: changes the "-" to "." in Taxa names, while as.phyDat keeps it

Issue - State: closed - Opened by CaesarAl over 5 years ago - 1 comment

#66 - Fix #65

Pull Request - State: closed - Opened by richelbilderbeek over 5 years ago - 7 comments

#65 - Bug: cannot find function concensus

Issue - State: closed - Opened by richelbilderbeek over 5 years ago - 3 comments

#64 - Expose bug in densiTree

Pull Request - State: closed - Opened by richelbilderbeek over 5 years ago - 3 comments

#63 - Anc. State return Types

Issue - State: open - Opened by wrightaprilm over 5 years ago - 1 comment

#62 - SimSeq() with substitution models

Issue - State: closed - Opened by jphill01 almost 6 years ago - 6 comments

#61 - Memory Issues when using phyDat on full length 16S rRNA sequences

Issue - State: closed - Opened by tbradley1013 about 6 years ago - 2 comments

#60 - Issue with maximum parsimony analysis

Issue - State: closed - Opened by BerzhanKurmanov about 6 years ago - 12 comments

#59 - SimSeq(): Generating DNA sequences without a tree

Issue - State: closed - Opened by jphill01 about 6 years ago - 3 comments

#58 - Odd behavior in fitch()

Issue - State: closed - Opened by wrightaprilm about 6 years ago - 3 comments

#57 - phangorn:::coph is unstable, produces NA's at times

Issue - State: closed - Opened by melmasri about 6 years ago - 2 comments

#56 - contruction of phylogenetic tree: taking too long

Issue - State: closed - Opened by saifsikdar about 6 years ago - 3 comments

#54 - "multicore=TRUE" does not work in bootstrap.phyDat()

Issue - State: closed - Opened by ashipunov over 6 years ago - 5 comments

#40 - Error in plotPhyloCoor when using densiTree on some trees

Issue - State: closed - Opened by richelbilderbeek over 6 years ago - 4 comments

#37 - error in neighborNet function

Issue - State: closed - Opened by natagalle almost 7 years ago - 6 comments

#36 - add references to Description

Issue - State: closed - Opened by KlausVigo almost 7 years ago
Labels: enhancement

#35 - 'optim.pml' error - missing value

Issue - State: open - Opened by Saetha almost 7 years ago - 4 comments

#34 - Cannot resolve .Call("invSites")

Issue - State: closed - Opened by ndukler almost 7 years ago - 1 comment

#33 - Is the alignment size limited?

Issue - State: closed - Opened by thkuo almost 7 years ago - 4 comments

#23 - problem with NJ()

Issue - State: closed - Opened by vhertzb over 7 years ago - 1 comment

#16 - Question: How long parameter optimization will take?

Issue - State: closed - Opened by giriarteS over 7 years ago - 7 comments

#15 - Problem when plotting network out of big data set

Issue - State: open - Opened by jorgeamaya almost 8 years ago - 4 comments