Ecosyste.ms: Issues

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GitHub / KarrLab/wc_utils issues and pull requests

#38 - attrdict package currently incompatible with Python 3.10

Issue - State: open - Opened by johnsekar over 2 years ago

#37 - Unittests failing with quilt

Issue - State: closed - Opened by artgoldberg almost 5 years ago - 1 comment
Labels: bug

#36 - Ensure that wc_utils/quilt.py can read karr_lab_build_config/wc_utils.cfg

Issue - State: closed - Opened by artgoldberg about 5 years ago - 1 comment
Labels: question

#35 - Make logging2 an optional dependency

Issue - State: closed - Opened by jonrkarr about 5 years ago - 1 comment
Labels: enhancement

#34 - Expand git.get_repo_metadata() to get repo metadata from installed packages

Issue - State: open - Opened by artgoldberg over 5 years ago
Labels: enhancement, future

#33 - Speedup YAML parsing with CDumper, CLoader

Issue - State: open - Opened by jonrkarr over 5 years ago
Labels: enhancement

#32 - Remove log requirement from wc_utils

Issue - State: closed - Opened by jonrkarr over 5 years ago - 1 comment
Labels: enhancement

#31 - Reduced memory usage of reading worksheet with many empty rows/columns at end

Issue - State: closed - Opened by jonrkarr over 5 years ago - 1 comment
Labels: enhancement

#30 - config cleanup

Issue - State: closed - Opened by artgoldberg over 5 years ago - 1 comment

#29 - Unclear error

Issue - State: closed - Opened by artgoldberg over 5 years ago - 1 comment
Labels: enhancement

#28 - Add method for unit test of object memory use

Issue - State: closed - Opened by artgoldberg over 5 years ago - 1 comment
Labels: enhancement

#26 - Make Worksheet, Row slicing return instances of Worksheet and Row rather than instance of list

Issue - State: closed - Opened by jonrkarr almost 6 years ago - 1 comment
Labels: enhancement

#25 - Utilize Quilt symbolic links to speed up downloading

Issue - State: closed - Opened by jonrkarr about 6 years ago - 1 comment
Labels: enhancement

#24 - Speedup Quilt downloading by installing individual paths/directories

Issue - State: closed - Opened by jonrkarr about 6 years ago - 1 comment
Labels: enhancement

#23 - Reduce requirements

Issue - State: closed - Opened by jonrkarr over 6 years ago - 2 comments
Labels: enhancement

#22 - Replace FTP backup with quilt

Issue - State: closed - Opened by jonrkarr over 6 years ago - 1 comment
Labels: enhancement

#21 - Investigate memoization of instance methods

Issue - State: open - Opened by jonrkarr over 6 years ago - 1 comment
Labels: enhancement

#19 - Change wc_utils.cache to use a higher performance backend

Issue - State: open - Opened by jonrkarr over 6 years ago
Labels: future

#18 - Chem formula: does not recognise 'S0' at end

Issue - State: closed - Opened by szb37 over 6 years ago

#16 - API for modifying config, e.g., for turning logging on and off

Issue - State: closed - Opened by artgoldberg over 6 years ago - 1 comment
Labels: enhancement

#15 - debug utils.test_randomize checked_sorted:151

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#14 - throw error for clashing fuzzy worksheet names

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#13 - rename obj_num --> row_num

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#12 - implement schema normalization method

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#11 - use lists instead of sets

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#10 - separate schema into its own repo / pypi package

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#9 - multiple inheritance

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment
Labels: enhancement

#8 - Allow exact attribute name matches in schema.io.Reader

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#7 - implement unique within

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#6 - add default, related_default arguments to RelatedAttribute constructors

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#5 - Create better error message

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#4 - address Pluralization of sheet names has strange consequences

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#3 - convert(csv,xlsx) writes a workbook that Excel (Mac 2016) calls 'unreadable'

Issue - State: closed - Opened by jonrkarr over 7 years ago - 2 comments

#2 - StringAttributes are not registering as attributes of the class

Issue - State: closed - Opened by jonrkarr over 7 years ago - 1 comment

#1 - Fix recursion in schema get_related, __eq__, difference

Issue - State: closed - Opened by jonrkarr over 7 years ago - 2 comments