Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / KalinNonchev/gnomAD_DB issues and pull requests

#36 - Gnomad v4 all populations

Issue - State: closed - Opened by SteampunkIslande 3 months ago - 2 comments

#35 - Discrepancy between allele frequency column (af) and gnomad website

Issue - State: closed - Opened by shwivel 4 months ago - 2 comments

#34 - Question about lcr and segdup

Issue - State: closed - Opened by sophiezhang-origin 5 months ago - 1 comment

#33 - Missing rs ID and south asian allele frequency

Issue - State: closed - Opened by shubham1637 5 months ago - 1 comment

#32 - Question about Exomes and Genomes Filters

Issue - State: closed - Opened by Sophieeeeeeee 5 months ago - 1 comment

#31 - sqlite gnomAD v4.1

Pull Request - State: closed - Opened by KalinNonchev 5 months ago

#29 - Missing variants in v4

Issue - State: closed - Opened by zainomarali 7 months ago - 2 comments

#28 - Variant Not Found in sqlite3 file but found in gnomad4 web

Issue - State: closed - Opened by lbundalian 8 months ago - 10 comments

#27 - Missing variant in Gnomad4 but in Gnomad3

Issue - State: closed - Opened by lbundalian 10 months ago - 5 comments

#26 - Simultaneously upload gnomAD v4.0.0 wgs and wes file

Issue - State: closed - Opened by heomanism 11 months ago - 4 comments

#25 - Update setup.py

Pull Request - State: closed - Opened by KalinNonchev 11 months ago

#24 - update v4

Pull Request - State: closed - Opened by KalinNonchev 11 months ago

#23 - Getting protein changes

Issue - State: closed - Opened by Michael-Bar about 1 year ago - 1 comment

#22 - Limited fields in the gnomAD SQLite database

Issue - State: closed - Opened by brettChapman about 1 year ago - 5 comments

#21 - Generating SQLite preprocessed files from gnomAD

Issue - State: closed - Opened by brettChapman about 1 year ago - 2 comments

#20 - Partial output when recreating database

Issue - State: closed - Opened by pkiehl2002 over 1 year ago - 13 comments

#19 - can't find 'AMR' AF in gnomad_db_v3.1.2

Issue - State: closed - Opened by loverlyday about 2 years ago - 4 comments

#18 - release SQL for gnomAD v3.1.2

Pull Request - State: closed - Opened by KalinNonchev about 2 years ago

#17 - bump gnomAD v3.1.2

Issue - State: closed - Opened by KalinNonchev about 2 years ago

#16 - conda test CircleCI received exit code 137

Issue - State: closed - Opened by KalinNonchev over 2 years ago - 4 comments

#15 - Output from get_info_from_str

Issue - State: closed - Opened by ichauchcc over 2 years ago - 3 comments

#14 - add additional columns from the big gnomad VCF file

Pull Request - State: closed - Opened by KalinNonchev almost 3 years ago

#13 - Unable to open database file with gnomAD_DB()

Issue - State: closed - Opened by PabloRomanjo almost 3 years ago - 2 comments

#12 - gnomad v2.1.1 wgs+wes snp list

Issue - State: closed - Opened by thchen86 about 3 years ago - 1 comment
Labels: enhancement

#11 - PRAGMA journal_mode=WAL;

Issue - State: closed - Opened by KalinNonchev about 3 years ago - 1 comment

#10 - Parallel and download function

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago

#9 - Load mitochondrial data

Issue - State: closed - Opened by bjmain over 3 years ago - 5 comments
Labels: enhancement

#8 - intern parallel corpus

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago

#7 - add method documentation

Issue - State: closed - Opened by KalinNonchev over 3 years ago
Labels: good first issue

#6 - interval aggregation

Issue - State: closed - Opened by KalinNonchev over 3 years ago
Labels: good first issue

#4 - Create python-publish.yml

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago

#3 - Create python-package.yml

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago

#2 - new interval function

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago

#1 - Add .circleci/config.yml

Pull Request - State: closed - Opened by KalinNonchev over 3 years ago