Kalan-Lab/zol issues and pull requests

#77 - Update CITATION.cff

Pull Request - State: closed - Opened by raufs 4 months ago

#76 - Incorporate an option for automatic visualization options for dereplicated gene cluster instances in zol (e.g. using pygenomeviz or clinker)

Issue - State: closed - Opened by raufs 4 months ago - 1 comment

#75 - Add options for skani sketching/searching, in particular for marker k-mer compression factor.

Issue - State: closed - Opened by raufs 4 months ago - 1 comment

#74 - Update annotateProtSeqs.py

Pull Request - State: closed - Opened by raufs 4 months ago

#73 - Update README.md

Pull Request - State: closed - Opened by raufs 4 months ago

#72 - Update setup.py

Pull Request - State: closed - Opened by raufs 5 months ago

#71 - Update zol.py

Pull Request - State: closed - Opened by raufs 5 months ago

#70 - Update zol.py

Pull Request - State: closed - Opened by raufs 5 months ago

#69 - Update zol.py

Pull Request - State: closed - Opened by raufs 5 months ago

#68 - Update cgc

Pull Request - State: closed - Opened by raufs 5 months ago

#67 - Delete Efaecalis_V583_epa_proteins.faa

Pull Request - State: closed - Opened by raufs 6 months ago

#66 - Update util.py

Pull Request - State: closed - Opened by raufs 8 months ago

#65 - Update fai

Pull Request - State: closed - Opened by raufs 9 months ago

#64 - Raufs patch 3

Pull Request - State: closed - Opened by raufs 10 months ago

#63 - Update prepTG

Pull Request - State: closed - Opened by raufs 10 months ago

#62 - Update prepTG

Pull Request - State: closed - Opened by raufs 10 months ago

#61 - Update README.md

Pull Request - State: closed - Opened by raufs 11 months ago

#60 - Update/match-up default E-value cutoff in simple BLAST options for abon, apos, and atpoc

Pull Request - State: closed - Opened by raufs 12 months ago

#59 - Update README.md

Pull Request - State: closed - Opened by raufs 12 months ago

#58 - Update README.md

Pull Request - State: closed - Opened by raufs 12 months ago

#57 - Update runProdigalAndMakeProperGenbank.py

Pull Request - State: closed - Opened by raufs 12 months ago

#56 - Update setup.py

Pull Request - State: closed - Opened by raufs 12 months ago

#55 - Update apos

Pull Request - State: closed - Opened by raufs 12 months ago

#54 - Update ZOL

Pull Request - State: closed - Opened by raufs 12 months ago

#53 - Update atpoc

Pull Request - State: closed - Opened by raufs 12 months ago

#52 - Update README.md

Pull Request - State: closed - Opened by raufs 12 months ago

#51 - Update abon

Pull Request - State: closed - Opened by raufs about 1 year ago

#50 - Update test_docker.sh

Pull Request - State: closed - Opened by raufs about 1 year ago

#49 - Update run_tests.sh

Pull Request - State: closed - Opened by raufs about 1 year ago

#48 - Update README.md

Pull Request - State: closed - Opened by raufs about 1 year ago

#47 - Correct if/else logic when determining consensus order

Pull Request - State: closed - Opened by raufs about 1 year ago

#46 - Update README.md

Pull Request - State: closed - Opened by raufs about 1 year ago

#45 - Update ZOL docker help function

Pull Request - State: closed - Opened by raufs about 1 year ago

#44 - Update setup_annotation_dbs.py

Pull Request - State: closed - Opened by raufs about 1 year ago

#43 - Update dbs script

Pull Request - State: closed - Opened by raufs about 1 year ago

#42 - Merge pull request #41 from Kalan-Lab/update-dbs-script

Pull Request - State: closed - Opened by raufs about 1 year ago

#41 - Update script for downloading annotation dbs

Pull Request - State: closed - Opened by raufs about 1 year ago

#40 - Update fai.py

Pull Request - State: closed - Opened by raufs about 1 year ago

#39 - Update fai.py

Pull Request - State: closed - Opened by raufs about 1 year ago

#38 - Update fai.py

Pull Request - State: closed - Opened by raufs about 1 year ago

#37 - Update README.md

Pull Request - State: closed - Opened by raufs about 1 year ago

#36 - Update README.md

Pull Request - State: closed - Opened by raufs about 1 year ago

#35 - update to v1.3.7

Pull Request - State: closed - Opened by raufs about 1 year ago

#34 - Update CITATION.cff

Pull Request - State: closed - Opened by raufs about 1 year ago