Ecosyste.ms: Issues

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GitHub / KCL-BMEIS/niftyreg issues and pull requests

#116 - CUDA-enabled card failed

Issue - State: open - Opened by salsoman about 2 months ago

#115 - How to run NiftyReg on GPU

Issue - State: open - Opened by koegl 3 months ago

#114 - Rearchitect and Reinstate GPU

Pull Request - State: open - Opened by onurulgen 3 months ago - 5 comments

#113 - Abnormal image distortion after registration

Issue - State: open - Opened by yuanpengpeng 5 months ago

#112 - Can two 2D images be registered

Issue - State: open - Opened by yesulove 6 months ago

#110 - Add include_directories for OpenMP

Pull Request - State: closed - Opened by KrisThielemans 9 months ago

#109 - omp.h not found on MacOS with Xclang

Issue - State: closed - Opened by KrisThielemans 9 months ago

#108 - make error

Issue - State: open - Opened by zes0v0inn 9 months ago

#106 - exported CONFIG.cmake problems

Issue - State: open - Opened by KrisThielemans 11 months ago

#105 - Comparisons with other methods

Issue - State: open - Opened by dipterix about 1 year ago

#104 - COVID-19 Neuroimpact in Children Study

Issue - State: closed - Opened by JilaNazari about 1 year ago - 1 comment

#103 - HILO Study

Issue - State: open - Opened by JilaNazari about 1 year ago - 1 comment

#102 - PROAFHF study

Issue - State: open - Opened by JilaNazari about 1 year ago - 1 comment

#101 - matlab/python code availability

Issue - State: open - Opened by fumin-guo about 1 year ago - 1 comment

#100 - reg_aladin ignores padding

Issue - State: open - Opened by neuronflow over 1 year ago

#99 - GPU availability

Issue - State: open - Opened by skgtohn over 1 year ago - 1 comment

#97 - transforming points

Issue - State: open - Opened by taborzbislaw over 1 year ago - 3 comments

#96 - [DOC] port documentation from command line tools from cmic to github

Issue - State: open - Opened by tvercaut over 1 year ago - 1 comment

#95 - Output redirected to a file appears to get truncated.

Issue - State: open - Opened by pwrightkcl over 1 year ago - 4 comments

#94 - reg_f3d nrr_cpp.nii

Issue - State: closed - Opened by Rigel-X over 1 year ago - 5 comments

#93 - this is a demo test

Issue - State: closed - Opened by mmodat about 2 years ago

#92 - Rearchitect F3D to reinstate GPU

Issue - State: open - Opened by onurulgen about 2 years ago - 10 comments
Labels: Development

#91 - Check installed version of niftyreg

Issue - State: closed - Opened by Chad1921 about 2 years ago - 1 comment

#90 - make error on Mac M1

Issue - State: closed - Opened by koegl about 2 years ago - 1 comment

#89 - niftyreg error

Issue - State: closed - Opened by nightandweather about 2 years ago - 2 comments
Labels: help wanted

#88 - GPU CI on self-hosted

Issue - State: open - Opened by mmodat over 2 years ago - 4 comments
Labels: Development

#87 - 85 need to update cmake files and cd environment

Pull Request - State: closed - Opened by mmodat over 2 years ago

#86 - Need to remove Matlab dependency for unit tests

Issue - State: closed - Opened by mmodat over 2 years ago - 2 comments

#85 - Need to update CMake files and CD environment

Issue - State: closed - Opened by mmodat over 2 years ago

#84 - Issue #33: Added an argument to set interpolation order in reg_average

Pull Request - State: closed - Opened by mmodat over 2 years ago

#83 - Issue #36: updated copyright throughout - 4 years later ...

Pull Request - State: closed - Opened by mmodat over 2 years ago

#82 - CUDA is not compatible with shared libraries

Issue - State: open - Opened by agathees over 2 years ago - 1 comment

#81 - ExternalEigenSupport

Issue - State: open - Opened by res191 over 2 years ago

#80 - pip package

Pull Request - State: open - Opened by casperdcl over 2 years ago

#79 - Errors building for ARM OSX

Issue - State: open - Opened by dstansby over 2 years ago - 1 comment

#78 - CUDA accelaration

Issue - State: closed - Opened by CarloPei almost 3 years ago - 5 comments

#77 - Installation

Issue - State: closed - Opened by stavrizinonos over 3 years ago - 1 comment

#76 - ERROR with NiftyReg installation

Issue - State: closed - Opened by ortegacruzd over 3 years ago - 4 comments

#75 - fix omp on gcc9

Pull Request - State: closed - Opened by casperdcl almost 4 years ago

#74 - GCC 9 Fails to build due to OpenMP changes

Issue - State: closed - Opened by ashgillman almost 4 years ago

#73 - Precompiled binaries for CBSI release

Issue - State: open - Opened by mgxd about 4 years ago

#72 - reg_f3d -ln option error

Issue - State: closed - Opened by taylorwuselman-zz over 4 years ago - 1 comment

#71 - rotation when using f3d_sym

Issue - State: open - Opened by rijobro over 4 years ago

#70 - Compiling linking to relative path

Issue - State: closed - Opened by vigji over 4 years ago - 1 comment

#69 - Compiling fails on macOS b/c of dynamic library not found

Issue - State: closed - Opened by vigji over 4 years ago - 3 comments

#68 - Segmentation fault (core dumped) if output dir doesn't exist

Issue - State: closed - Opened by fepegar over 4 years ago
Labels: bug

#67 - pass PIC compiler options to NVCC

Pull Request - State: closed - Opened by rijobro over 4 years ago - 4 comments

#66 - CUDA position independent code

Issue - State: closed - Opened by rijobro over 4 years ago - 3 comments

#65 - memory leak in reg_affine_deformationField3D?

Issue - State: open - Opened by rijobro almost 5 years ago

#64 - Floating mask is ignored in reg_f3d

Issue - State: open - Opened by fepegar almost 5 years ago

#63 - reg_base mem leak

Pull Request - State: closed - Opened by rijobro almost 5 years ago

#62 - compiling failed with CUDA

Issue - State: open - Opened by qiang-zhang-neu almost 5 years ago

#61 - const create control point grid

Pull Request - State: closed - Opened by rijobro almost 5 years ago

#60 - Const resampling

Pull Request - State: closed - Opened by rijobro almost 5 years ago

#59 - reg_aladin interpolation

Issue - State: open - Opened by rijobro almost 5 years ago - 3 comments

#58 - The reg_f3d GPU capability has been de-activated in the current release.

Issue - State: closed - Opened by lianliliu about 5 years ago - 1 comment

#57 - Parameters

Issue - State: open - Opened by AganL about 5 years ago

#56 - Updating tags with versions

Issue - State: open - Opened by ashgillman about 5 years ago

#54 - include stdexcept for USE_THROW_EXCEPT

Pull Request - State: closed - Opened by rijobro over 5 years ago

#53 - NIFTYREGConfig.cmake: find_package is case sensitive

Pull Request - State: closed - Opened by rijobro over 5 years ago - 2 comments

#52 - Issue #46: Remove the GPU related line in the reg_f3d help

Pull Request - State: closed - Opened by mmodat over 5 years ago

#51 - Create NiftyRegConfig.cmake file

Pull Request - State: closed - Opened by rijobro over 5 years ago

#50 - NiftyRegConfig.cmake

Issue - State: closed - Opened by rijobro over 5 years ago - 1 comment

#49 - CUDA ERROR: too many resources requested for launch

Issue - State: closed - Opened by qinwang-ai over 5 years ago - 2 comments

#48 - refactoring nonlinear

Issue - State: open - Opened by mmodat over 5 years ago

#47 - Setting ci

Pull Request - State: closed - Opened by mmodat almost 6 years ago

#46 - Error: unknown parameter in reg_f3d

Issue - State: closed - Opened by fepegar almost 6 years ago - 1 comment

#45 - Issue #44: Adding intensity centre of mass to init aladin

Pull Request - State: closed - Opened by mmodat almost 6 years ago

#44 - Use intensity centre of mass to initialise the transformation

Issue - State: closed - Opened by ddrobny almost 6 years ago - 1 comment

#43 - Setting CI

Issue - State: closed - Opened by mmodat almost 6 years ago - 1 comment

#42 - Compiling with CUDA - unsupported GNU version

Issue - State: closed - Opened by fepegar about 6 years ago - 1 comment

#40 - 28 sliding regions

Pull Request - State: open - Opened by b-eiben about 6 years ago - 3 comments

#38 - landmark prior for regf3d2

Issue - State: open - Opened by renbem over 6 years ago

#37 - KL-Divergence

Issue - State: closed - Opened by mmodat over 6 years ago - 1 comment

#36 - Copyright update

Issue - State: closed - Opened by mmodat over 6 years ago - 1 comment

#35 - reg_aladin v1.3.9 and v1.5.58 discrepancy

Issue - State: open - Opened by mmodat over 6 years ago - 2 comments
Labels: bug

#34 - preprocessor error

Issue - State: closed - Opened by mmodat over 6 years ago - 3 comments

#33 - reg_average_interp_option

Issue - State: closed - Opened by mmodat over 6 years ago - 2 comments

#32 - groupwise_niftyreg_run.sh fails after first rigid registration iteration

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments

#31 - Adding a padding option in reg_aladin

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments

#30 - CLIFlagUpdates

Issue - State: closed - Opened by mmodat over 6 years ago - 14 comments

#29 - modifying linear energy weight between levels

Issue - State: closed - Opened by mmodat over 6 years ago - 5 comments

#28 - sliding-regions

Issue - State: open - Opened by mmodat over 6 years ago - 1 comment
Labels: Development

#27 - bugs in reg_tools and reg_transform

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments

#26 - MSVC 2015 fixes

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments
Labels: Fix

#25 - Cleaning discrete code

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments

#24 - reg_average fails with one input

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments

#23 - Linear elasticity gradient error

Issue - State: closed - Opened by mmodat over 6 years ago - 2 comments

#22 - Apply transformation to landmark

Issue - State: closed - Opened by mmodat over 6 years ago - 11 comments

#21 - Ceres trials

Issue - State: closed - Opened by mmodat over 6 years ago - 3 comments
Labels: Development

#20 - Discrepancy between cluster and local

Issue - State: closed - Opened by mmodat over 6 years ago - 11 comments

#19 - reg_test_coherence_blockMatching error

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments
Labels: Fix

#18 - reg_test_measure_SSD_?D unit tests fail

Issue - State: closed - Opened by mmodat over 6 years ago - 6 comments