JuliaOcean/PlanktonIndividuals.jl issues and pull requests

#77 - a more detailed iron allocation

Pull Request - State: closed - Opened by zhenwu0728 29 days ago

#76 - Add support for `Metal.jl`

Pull Request - State: closed - Opened by zhenwu0728 2 months ago - 1 comment

#75 - add `IronEnergyMode`

Pull Request - State: closed - Opened by zhenwu0728 3 months ago

#74 - use `accumulate!` instead of `cumsum`

Pull Request - State: closed - Opened by zhenwu0728 4 months ago

#73 - Arbitrary Functions for Nutrients and Velocity Field

Issue - State: open - Opened by Atreyu-94 4 months ago - 1 comment
Labels: good first issue

#72 - Arbitrary Distribution of Individuals as Initial Conditions

Issue - State: open - Opened by Atreyu-94 4 months ago - 2 comments
Labels: good first issue

#72 - Arbitrary Distribution of Individuals as Initial Conditions

Issue - State: open - Opened by Atreyu-94 4 months ago - 2 comments

#71 - update notebook dependencies

Pull Request - State: closed - Opened by gaelforget 5 months ago

#70 - use `Float32` as default

Pull Request - State: closed - Opened by zhenwu0728 5 months ago

#69 - support both `Float32` and `Float64`

Pull Request - State: closed - Opened by zhenwu0728 5 months ago

#68 - use atomic in KernerAbstractions.jl

Pull Request - State: closed - Opened by zhenwu0728 5 months ago

#67 - Add accumulated thermal damage and related stuff

Pull Request - State: closed - Opened by zhenwu0728 6 months ago

#66 - Feature Request: Silicon cycle

Issue - State: open - Opened by Atreyu-94 10 months ago

#66 - Feature Request: Silicon cycle

Issue - State: open - Opened by Atreyu-94 10 months ago - 2 comments

#65 - Immersed Boundary Conditions

Issue - State: open - Opened by Atreyu-94 about 1 year ago - 1 comment

#64 - start to use KA v0.9 and remove events in KA

Pull Request - State: closed - Opened by zhenwu0728 over 1 year ago

#63 - update / fix example

Pull Request - State: closed - Opened by gaelforget over 1 year ago

#62 - global 3D example broken

Issue - State: closed - Opened by zhenwu0728 almost 2 years ago

#61 - add ability to simulate molecule diffusion

Pull Request - State: closed - Opened by zhenwu0728 almost 2 years ago

#60 - Thermal mortality

Pull Request - State: closed - Opened by zhenwu0728 about 2 years ago

#59 - more plots (tracer,Chl) in 0D example

Pull Request - State: closed - Opened by gaelforget over 2 years ago - 1 comment

#58 - final (?) revision to paper

Pull Request - State: closed - Opened by gaelforget over 2 years ago - 1 comment

#57 - add Macro molecular mode for phytoplankton growth

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago

#56 - add CONTRIBUTING.md draft

Pull Request - State: closed - Opened by gaelforget over 2 years ago

#55 - CompatHelper: bump compat for KernelAbstractions to 0.8, (keep existing compat)

Pull Request - State: closed - Opened by github-actions[bot] over 2 years ago

#54 - CompatHelper: bump compat for CUDAKernels to 0.4, (keep existing compat)

Pull Request - State: closed - Opened by github-actions[bot] over 2 years ago

#53 - clean up code in halo_regions.jl

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago

#52 - update docs, README, and joss paper

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago - 1 comment

#51 - stable versions of docs not getting generated

Issue - State: closed - Opened by gaelforget over 2 years ago - 1 comment

#50 - Example fixes & add global 3D example

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago - 1 comment

#49 - reorganize grid structs into RectilinearGrid and LatLonGrid

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago

#48 - one-year run and plot of 3D advection example

Pull Request - State: closed - Opened by gaelforget over 2 years ago - 1 comment

#47 - Doc fix

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago

#46 - doc fixes / improvements

Pull Request - State: closed - Opened by gaelforget over 2 years ago - 1 comment

#45 - include description of model outputs in JOSS paper

Pull Request - State: closed - Opened by zhenwu0728 over 2 years ago - 1 comment

#44 - JOSS paper - update citations

Pull Request - State: closed - Opened by zhenwu0728 almost 3 years ago - 1 comment

#43 - update examples

Pull Request - State: closed - Opened by zhenwu0728 almost 3 years ago

#42 - add land masks for tracer advection in global cases

Pull Request - State: closed - Opened by zhenwu0728 almost 3 years ago - 1 comment

#41 - update to joss branch [WIP]

Pull Request - State: closed - Opened by gaelforget almost 3 years ago - 1 comment

#40 - add example 3D example setup

Pull Request - State: closed - Opened by gaelforget almost 3 years ago - 1 comment

#39 - reduced memory allocation for individuals+improved performance

Pull Request - State: closed - Opened by zhenwu0728 almost 3 years ago - 2 comments

#38 - add CarbonMode for phytoplankton physiology

Pull Request - State: closed - Opened by zhenwu0728 almost 3 years ago - 1 comment

#37 - unexpected slow down when benchmarking 0D simulations

Issue - State: closed - Opened by zhenwu0728 about 3 years ago - 2 comments

#36 - for Julia>=1.7 CUDA no longer exports @atomic

Pull Request - State: closed - Opened by gaelforget about 3 years ago - 1 comment

#35 - CompatHelper: bump compat for "KernelAbstractions" to "0.7"

Pull Request - State: closed - Opened by github-actions[bot] about 3 years ago

#34 - CompatHelper: bump compat for "StructArrays" to "0.6"

Pull Request - State: closed - Opened by github-actions[bot] about 3 years ago

#33 - CompatHelper: bump compat for "CUDAKernels" to "0.3"

Pull Request - State: closed - Opened by github-actions[bot] about 3 years ago

#32 - allow more flexibility for PARF and temperature

Pull Request - State: closed - Opened by zhenwu0728 about 3 years ago - 1 comment

#31 - update badge and link to use travis-ci.com

Pull Request - State: closed - Opened by gaelforget over 3 years ago

#30 - first set of dcumention edits

Pull Request - State: closed - Opened by gaelforget over 3 years ago - 2 comments

#29 - update docs of model description

Pull Request - State: closed - Opened by zhenwu0728 over 3 years ago - 1 comment

#28 - bug fixes in docs & examples

Pull Request - State: closed - Opened by zhenwu0728 over 3 years ago

#27 - Dev0513

Pull Request - State: closed - Opened by zhenwu0728 over 3 years ago

#26 - Merge pull request #25 from JuliaOcean/dev0513

Pull Request - State: closed - Opened by zhenwu0728 over 3 years ago

#25 - docs update + separate diagnostics from PlanktonModel

Pull Request - State: closed - Opened by zhenwu0728 over 3 years ago

#24 - cosmetic changes to examples + new example name suggestions + mv helper functions

Pull Request - State: closed - Opened by gaelforget over 3 years ago - 3 comments

#23 - docs revision (cosmetic changes mostly)

Pull Request - State: closed - Opened by gaelforget over 3 years ago - 1 comment

#22 - An example of global simulation

Issue - State: closed - Opened by zhenwu0728 over 3 years ago - 1 comment

#21 - global ocean example + README update + plankton_without_physiology.jl

Pull Request - State: closed - Opened by gaelforget over 3 years ago

#20 - vertical_2D_example & literate

Pull Request - State: closed - Opened by gaelforget over 3 years ago - 1 comment

#19 - Create a divergence-free 3D velocity field to be used in examples

Issue - State: closed - Opened by zhenwu0728 over 3 years ago - 7 comments

#18 - TagBot trigger issue

Issue - State: closed - Opened by JuliaTagBot over 3 years ago - 34 comments