Ecosyste.ms: Issues

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GitHub / JuliaDynamics/Attractors.jl issues and pull requests

#117 - Fix bug of no rescaling

Pull Request - State: closed - Opened by Datseris 7 months ago - 1 comment

#116 - Correct citation to Gelbrecht2020

Pull Request - State: closed - Opened by Datseris 8 months ago - 1 comment

#115 - fix #114

Pull Request - State: closed - Opened by spaette 9 months ago

#114 - fixed all the typos

Pull Request - State: closed - Opened by Jay-sanjay 9 months ago - 2 comments

#113 - typos

Issue - State: closed - Opened by spaette 9 months ago - 1 comment
Labels: good first issue

#112 - Minor printing fixes

Pull Request - State: closed - Opened by Datseris 9 months ago - 1 comment

#110 - improve matching description

Pull Request - State: closed - Opened by Datseris 9 months ago - 1 comment

#109 - Add animation of how `AttractorsViaRecurrences` works

Pull Request - State: closed - Opened by Datseris 9 months ago - 2 comments

#108 - fix `AttractorsViaProximity` with `Inf` trajectories

Pull Request - State: closed - Opened by Datseris 9 months ago - 2 comments

#107 - Rename some keywords of `AttractorsViaRecurrences`

Pull Request - State: closed - Opened by Datseris 9 months ago - 8 comments

#106 - Add an advanced matching example

Issue - State: open - Opened by Datseris 9 months ago
Labels: documentation, good first issue

#105 - Small improvements on update_finite_state_machine

Pull Request - State: closed - Opened by awage 9 months ago

#104 - Rename keywords of `AttractorsViaRecurrences`

Issue - State: closed - Opened by Datseris 9 months ago - 1 comment
Labels: documentation

#103 - Make `AttractorsViaRecurrences` more simple when finding and storing attractors

Pull Request - State: closed - Opened by Datseris 9 months ago - 16 comments

#102 - AttractorsViaRecurrences `mx_chk_loc_att` and `:att_found` state

Issue - State: closed - Opened by Datseris 9 months ago - 3 comments
Labels: design discussion, recurrences

#101 - Cleanup and clarify recurrences src / Fix #100

Pull Request - State: closed - Opened by Datseris 9 months ago - 5 comments

#100 - Why do we store the visited cells...?

Issue - State: closed - Opened by Datseris 9 months ago - 4 comments
Labels: performance, recurrences

#99 - Creating ics on grid for higher dimensions

Pull Request - State: open - Opened by KalelR 9 months ago - 3 comments

#98 - Grids of `AttractorViaRecurrences` unecessarily limit the number type to `Float64`

Issue - State: open - Opened by Datseris 9 months ago - 2 comments
Labels: good first issue, performance

#97 - Add new grouping method: AttractorsViaPairwiseComparison

Pull Request - State: closed - Opened by KalelR 9 months ago - 18 comments

#96 - Make Automatic Δt work for all grid types

Pull Request - State: closed - Opened by Datseris 9 months ago - 1 comment

#95 - Convenience function for various global stability / resilience measures

Issue - State: open - Opened by Datseris 10 months ago
Labels: enhancement

#94 - Irregular grid via matrices

Pull Request - State: closed - Opened by StefanVaylBX2023 10 months ago - 16 comments

#93 - Irregular grids with discretization lvl specification

Pull Request - State: closed - Opened by StefanVaylBX2023 10 months ago - 2 comments

#92 - Rework clustering src to return ε and optimal silhuette value

Pull Request - State: closed - Opened by Datseris 11 months ago

#91 - Irregular grid support, issue #35

Pull Request - State: closed - Opened by StefanVaylBX2023 11 months ago - 13 comments

#90 - Rematch, v2: a new dawn

Pull Request - State: closed - Opened by Datseris 11 months ago - 2 comments

#89 - Use new `statespace_sampler`

Pull Request - State: closed - Opened by Datseris 11 months ago

#88 - Irregular grid

Pull Request - State: closed - Opened by StefanVaylBX2023 11 months ago - 3 comments

#87 - use DocumenterCitations.jl / cite published article

Pull Request - State: closed - Opened by Datseris 12 months ago - 2 comments

#86 - Improve explanation of matching

Pull Request - State: closed - Opened by Datseris 12 months ago - 1 comment

#85 - Optimize feature selection for clustering (or in general finding attractors)

Issue - State: open - Opened by Datseris 12 months ago - 6 comments
Labels: enhancement, hard, grouping

#84 - Simpler and clearer grouping configuration for AttractorsViaFeaturizing

Issue - State: open - Opened by KalelR about 1 year ago - 5 comments
Labels: enhancement, good first issue, grouping, clarification-needed

#83 - Minimal fatal shock algorithm

Pull Request - State: closed - Opened by StefanVaylBX2023 about 1 year ago - 51 comments

#82 - Poincare map example

Pull Request - State: closed - Opened by Datseris about 1 year ago

#81 - Renames and docs improve clarity

Pull Request - State: closed - Opened by Datseris about 1 year ago - 1 comment

#80 - Brute force mfs draft, BlackBoxOptim in progress

Pull Request - State: closed - Opened by StefanVaylBX2023 about 1 year ago - 1 comment

#79 - Improve memory-efficiency of clustering algorithm in AttractorsViaFeaturizing

Issue - State: open - Opened by KalelR about 1 year ago - 1 comment

#78 - Fix bug in heatmap plot

Pull Request - State: closed - Opened by awage about 1 year ago - 4 comments

#77 - heatmap_basins_attractors doesn't work for Henon map

Issue - State: closed - Opened by Xiaomingzzhang about 1 year ago - 1 comment
Labels: bug, plotting

#76 - Creating ics on grid for basins of attraction is super slow for higher dimensions

Issue - State: open - Opened by KalelR about 1 year ago - 17 comments

#75 - bugfix for basins of attraction

Pull Request - State: closed - Opened by awage about 1 year ago - 7 comments

#74 - Minor plotting polish

Pull Request - State: closed - Opened by Datseris about 1 year ago

#73 - Key `0` returned by `AttractrosViaRecurrences`

Issue - State: closed - Opened by Datseris about 1 year ago - 3 comments
Labels: bug, recurrences

#72 - Use extension package for visualizations

Pull Request - State: closed - Opened by Datseris about 1 year ago

#71 - QoL: automatic limits in attractor continuation animation

Issue - State: open - Opened by Datseris about 1 year ago
Labels: good first issue, ux, visualization

#70 - Methods to help in finding good parameters for the recurrences method

Issue - State: open - Opened by KalelR about 1 year ago - 8 comments
Labels: enhancement, wanted feature, design discussion, recurrences, ux

#69 - Parameter-by-parameter continuation using featurizing

Pull Request - State: open - Opened by KalelR about 1 year ago - 9 comments

#68 - Remove assert in favor of error

Pull Request - State: closed - Opened by awage about 1 year ago

#67 - AttractorViaRecurrencies not working

Issue - State: closed - Opened by mdepitta about 1 year ago - 5 comments
Labels: question

#66 - Cite arxiv paper

Pull Request - State: closed - Opened by Datseris about 1 year ago - 5 comments

#65 - Algorithms to find basin boundary

Issue - State: open - Opened by awage about 1 year ago - 2 comments
Labels: basin boundaries

#64 - Add `remacth!` function ; do some renames and doc polish

Pull Request - State: closed - Opened by Datseris about 1 year ago - 3 comments

#63 - Basin+attractor heatmap plotting function + expose plotting

Pull Request - State: closed - Opened by Datseris about 1 year ago

#62 - Rename `tipping_probabilities` to `basin_overlap`

Issue - State: open - Opened by Datseris about 1 year ago
Labels: tipping, ux

#61 - Edgetracking algorithm

Pull Request - State: open - Opened by reykboerner about 1 year ago - 21 comments

#60 - Octopus like basins

Issue - State: open - Opened by Datseris about 1 year ago - 8 comments
Labels: basin boundaries

#59 - Fix `_rescale_to_01`

Pull Request - State: closed - Opened by KalelR over 1 year ago - 8 comments

#58 - Provide "rematch" function

Issue - State: closed - Opened by Datseris over 1 year ago
Labels: good first issue, recurrences, ux, continuation

#57 - Successful step and plotting qol improvements

Pull Request - State: closed - Opened by Datseris over 1 year ago - 1 comment

#56 - Allow `Dt` instead of `Δt` in recurrences method

Pull Request - State: closed - Opened by Datseris over 1 year ago

#55 - Function `_rescale_to_01` is incorrect

Issue - State: closed - Opened by KalelR over 1 year ago - 7 comments

#54 - Update clustering for new interface of Clustering.jl

Pull Request - State: closed - Opened by KalelR over 1 year ago - 1 comment

#53 - CompatHelper: bump compat for Clustering to 0.15, (keep existing compat)

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago - 3 comments

#52 - Better progress bars

Issue - State: open - Opened by Datseris over 1 year ago
Labels: ux

#51 - Automatic characterization of attractors in the recurrences version

Issue - State: open - Opened by Datseris over 1 year ago
Labels: enhancement, recurrences

#50 - GroupAcrossParams improvements

Pull Request - State: closed - Opened by Datseris over 1 year ago

#49 - Separate the grouping functionality into a new package

Issue - State: open - Opened by Datseris over 1 year ago
Labels: simplification

#48 - add flowchart figure for Attractors.jl

Pull Request - State: closed - Opened by Datseris over 1 year ago

#47 - Add option `force_non_adaptive` to `AttractorsViaRecurrences`

Pull Request - State: closed - Opened by Datseris over 1 year ago

#46 - Always return attractors

Pull Request - State: closed - Opened by Datseris over 1 year ago - 8 comments

#45 - Minor bug and docfixes

Pull Request - State: closed - Opened by Datseris over 1 year ago - 1 comment

#44 - TagBot trigger issue

Issue - State: closed - Opened by JuliaTagBot over 1 year ago - 34 comments

#43 - Finalize docs of Attractors.jl before publish

Pull Request - State: closed - Opened by Datseris over 1 year ago

#42 - Finish continuation interface, and allow clustering of attractors

Pull Request - State: closed - Opened by Datseris over 1 year ago

#41 - fix tests; add Julia compat

Pull Request - State: closed - Opened by Datseris over 1 year ago

#40 - Change the interface for grouping and matching attractors

Pull Request - State: closed - Opened by awage over 1 year ago - 8 comments

#39 - Add `GroupViaHistogram` and passing tests

Pull Request - State: closed - Opened by Datseris over 1 year ago

#37 - Move to DynamicalSystemsBase 3.0

Pull Request - State: closed - Opened by Datseris over 1 year ago

#35 - Basins of Attraction of irregularly spaced grid

Issue - State: open - Opened by mdepitta over 1 year ago - 9 comments

#34 - tipping_probabilities: Kills Kernel when basin array is large

Issue - State: open - Opened by mdepitta over 1 year ago - 5 comments
Labels: performance

#33 - `AttractorsViaProximity` returns inconsistent attractor labels for the same state

Issue - State: closed - Opened by reykboerner over 1 year ago - 3 comments
Labels: bug

#32 - Aggregate attractors / Rework grouping-based continuation

Pull Request - State: closed - Opened by Datseris over 1 year ago - 12 comments

#31 - Grouping and matching attractors

Issue - State: closed - Opened by KalelR over 1 year ago - 6 comments

#30 - Fix rogue rng in continuation algorithm

Pull Request - State: closed - Opened by KalelR over 1 year ago

#29 - Cluster attractors accross parameters

Pull Request - State: closed - Opened by awage over 1 year ago - 2 comments

#28 - Clusters Attractors across parameters

Pull Request - State: closed - Opened by awage over 1 year ago - 1 comment

#25 - Clustering continuation across parameters (mcbb)

Pull Request - State: closed - Opened by awage over 1 year ago - 12 comments

#22 - Refactor clustering into generic "grouping" interface.

Pull Request - State: closed - Opened by Datseris over 1 year ago - 5 comments

#18 - make sampler optional in recurrences continuation

Pull Request - State: closed - Opened by Datseris over 1 year ago

#17 - Fix tests and docs on `main` branch

Pull Request - State: closed - Opened by Datseris over 1 year ago

#16 - Improve code for clustering features

Pull Request - State: closed - Opened by KalelR over 1 year ago