Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / John-P/wsic issues and pull requests

#151 - Issue installing with pip

Issue - State: open - Opened by Abdol 5 months ago

#150 - Generic tiled TIF to SVS. Could not serialize DataArray

Issue - State: closed - Opened by tuttelikz 8 months ago - 1 comment

#149 - Support for DICOM multi level

Issue - State: closed - Opened by ChristianMarzahl about 1 year ago - 1 comment

#148 - ⬆️ Bump pytest from 7.3.1 to 7.4.1

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#147 - ⬆️ Bump tox from 4.5.2 to 4.11.1

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#146 - ⬆️ Bump tox from 4.5.2 to 4.11.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#145 - ⬆️ Bump tox from 4.5.2 to 4.10.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#144 - ⬆️ Bump zarr from 2.14.2 to 2.16.1

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#143 - ⬆️ Bump tox from 4.5.2 to 4.9.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#142 - ⬆️ Bump tox from 4.5.2 to 4.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#141 - ⬆️ Bump tox from 4.5.2 to 4.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#140 - ⬆️ Bump zarr from 2.14.2 to 2.16.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#139 - ⬆️ Bump black from 23.3.0 to 23.7.0

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#138 - :robot: pre-commit autoupdate

Pull Request - State: open - Opened by pre-commit-ci[bot] over 1 year ago

#137 - ⬆️ Bump tox from 4.5.2 to 4.6.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#136 - ⬆️ Bump pytest from 7.3.1 to 7.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#135 - ⬆️ Bump tox from 4.5.2 to 4.6.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#134 - ⬆️ Bump tox from 4.5.2 to 4.6.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#133 - ⬆️ Bump tox from 4.5.2 to 4.6.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#132 - ⬆️ Bump zarr from 2.14.2 to 2.15.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#131 - ⬆️ Bump pytest from 7.3.1 to 7.3.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#130 - ⬆️ Bump tox from 4.5.2 to 4.6.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#129 - 🐛 Add QOI To FIXED_LEVEL_CODECS

Pull Request - State: closed - Opened by John-P over 1 year ago
Labels: bug

#128 - ⬆️ Bump tox from 4.5.1 to 4.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#127 - 📝 Update Documentation

Pull Request - State: open - Opened by John-P over 1 year ago - 1 comment
Labels: documentation

#126 - 📝 Update Documentation

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: documentation

#125 - Docs update

Pull Request - State: closed - Opened by John-P over 1 year ago
Labels: documentation

#124 - 🚀 Prepare Release 0.9.0

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#123 - ⬆️ Bump pytest from 7.3.0 to 7.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#122 - 📝 Update Documentation

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: documentation

#121 - ⬆️ Bump tox from 4.4.8 to 4.5.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#120 - 🚸 Improve CLI

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#119 - ⬆️ Bump pip from 23.1 to 23.1.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#118 - 📝 Update & Improve Documentation

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: documentation

#117 - ✨ Add Support For Writing To Other Zarr Stores

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#116 - ✨ Read MPP From NGFF

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#115 - 🐛 Fix Parsing NGFF Zattrs

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#114 - 🐛 Fix Writing MPP For DICOM Images

Pull Request - State: closed - Opened by John-P over 1 year ago
Labels: bug

#113 - 🚸 Add Better Validation To TIFF Write Arguments

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#112 - ⬆️ Bump pip from 23.0.1 to 23.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#111 - Convert SVS to NDPI

Issue - State: open - Opened by iamalonso over 1 year ago - 4 comments
Labels: enhancement

#110 - ⬆️ Bump pytest from 7.2.2 to 7.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#109 - ⬆️ Bump tox from 4.4.8 to 4.4.11

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#108 - 🔀 Merge Main

Pull Request - State: closed - Opened by John-P over 1 year ago

#107 - 🚀 Release v0.8.2

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#106 - 🚀 Release v0.8.2

Pull Request - State: closed - Opened by John-P over 1 year ago

#105 - :art: Improve DICOM Reader Slow Init Warning

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#104 - 🩹 Correct Level Printout When Writing Pyramid

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#103 - 🚀 Release v0.8.2

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#102 - 🚑 Fix `DICOMWSIReader` Requiring Interactive Input

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#101 - :sparkles: Validation & Handle Negative Index Wrap

Pull Request - State: open - Opened by ajinkya-kulkarni over 1 year ago - 1 comment

#100 - 🚀 Release v0.8.0

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#99 - 🚀 v0.8.0 Release

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#98 - 🧹 Tidying Up

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#97 - 🔥 Remove OpenSlide Thumbnail Method

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#96 - ⚡️ Use Persistent Workers To Get Tiles

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#95 - 🚸 Prompt User To Make TILED_FULL DICOM Copy

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#94 - ⬆️ Bump twine from 1.14.0 to 4.0.2

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#93 - ⬆️ Bump black from 23.1.0 to 23.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#92 - 🔥 Remove OpenSlide Thumbnail Method

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#91 - ✨ Add Overwrite Option To Transcode CLI

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment

#90 - ⬆️ Bump watchdog from 2.3.1 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#89 - ⬆️ Bump tox from 4.4.7 to 4.4.8

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#88 - 🚸 Add Unit Aliases In Conversion Functions

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug, enhancement

#87 - 🐛 Fix dtype Check In TIFFWriter

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#86 - 🐛 Add Missing CLI Branch For DCM Convert

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#85 - ✨ Add DICOM Transcode

Pull Request - State: closed - Opened by John-P over 1 year ago
Labels: enhancement

#84 - 🐛 Add Missing Enum `Codec.from_tiff` For DEFLATE

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: bug

#83 - ⬆️ Bump wheel from 0.38.4 to 0.40.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#82 - ⬆️ Bump pip from 22.2.2 to 23.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#81 - ⬆️ Bump zarr from 2.13.3 to 2.14.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#80 - ⬆️ Bump black from 22.10.0 to 23.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#79 - :sparkles: Add DICOM VL WSI Writer

Pull Request - State: closed - Opened by John-P over 1 year ago - 1 comment
Labels: enhancement

#78 - ⬆️ Bump tox from 3.26.0 to 4.4.7

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#77 - ⬆️ Bump pytest from 7.1.3 to 7.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#76 - ⬆️ Bump watchdog from 2.1.9 to 2.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#75 - ⬆️ Bump watchdog from 2.1.9 to 2.3.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#74 - ⬆️ Bump tox from 3.26.0 to 4.4.6

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#73 - MPP data missing from OpenSlideReader

Issue - State: closed - Opened by himekifee almost 2 years ago - 1 comment
Labels: bug

#72 - ⬆️ Bump tox from 3.26.0 to 4.4.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#71 - ⬆️ Bump tox from 3.26.0 to 4.4.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#70 - ⬆️ Bump tox from 3.26.0 to 4.4.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#69 - :robot: pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago

#68 - ⬆️ Bump tox from 3.26.0 to 4.4.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#67 - ⬆️ Bump tox from 3.26.0 to 4.3.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#66 - ⬆️ Bump tox from 3.26.0 to 4.3.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#65 - ⬆️ Bump tox from 3.26.0 to 4.3.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#64 - ⬆️ Bump pytest from 7.1.3 to 7.2.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#63 - ⬆️ Bump tox from 3.26.0 to 4.3.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#62 - ⬆️ Bump flake8 from 5.0.4 to 6.0.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#61 - ⬆️ Bump watchdog from 2.1.9 to 2.2.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#60 - ⬆️ Bump wheel from 0.37.1 to 0.38.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#59 - ⬆️ Bump wheel from 0.37.1 to 0.38.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#58 - :bug: Fix MPP/AppMag Writing in SVSWriter

Pull Request - State: closed - Opened by John-P almost 2 years ago - 1 comment
Labels: bug

#57 - :bookmark: Release Version 0.7.0

Pull Request - State: closed - Opened by John-P almost 2 years ago

#56 - :wrench: Update pre-commit.ci Message Strings

Pull Request - State: closed - Opened by John-P almost 2 years ago - 1 comment

#55 - :bug: Fix Reading/Writing Resolution

Pull Request - State: closed - Opened by John-P almost 2 years ago
Labels: bug

#54 - Incorrect MPP resolution handling from JP2 image

Issue - State: closed - Opened by himekifee almost 2 years ago - 1 comment
Labels: bug

#53 - :bug: Join Child Processes

Pull Request - State: closed - Opened by John-P almost 2 years ago - 1 comment
Labels: bug

#52 - Tile read timed out when converting images

Issue - State: closed - Opened by himekifee about 2 years ago - 3 comments