Ecosyste.ms: Issues

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GitHub / JLSteenwyk/orthosnap issues and pull requests

#12 - Bump python

Pull Request - State: closed - Opened by JLSteenwyk 6 months ago

#11 - New python and biopython versions

Pull Request - State: closed - Opened by JLSteenwyk 11 months ago

#10 - created a new argument to report how inparalogs are handled

Pull Request - State: closed - Opened by JLSteenwyk 11 months ago

#9 - Orthosnap output

Issue - State: closed - Opened by evelinepinseel 12 months ago - 11 comments

#8 - New python and biopython versions

Pull Request - State: closed - Opened by JLSteenwyk about 1 year ago

#7 - Snakemake environment build-up for orthosnap.

Issue - State: closed - Opened by Andyargueasae about 1 year ago - 1 comment

#6 - Some output files missing or empty.

Issue - State: closed - Opened by drabe004 over 1 year ago - 14 comments

#5 - only identify one SNAP-OG

Issue - State: closed - Opened by hanxiaoxu1110 over 1 year ago - 3 comments

#4 - Single-copy orthologous genes identified is 0

Issue - State: closed - Opened by hanxiaoxu1110 over 1 year ago - 3 comments

#3 - Inconsistency in orthosnap results

Issue - State: closed - Opened by yuemeanshappy over 1 year ago - 3 comments

#2 - orthosnap: error: unrecognized arguments: -ip median_seq_len

Issue - State: closed - Opened by alexvasilikop about 2 years ago - 1 comment

#1 - Is it neceaasay to use unaligned fasta files?

Issue - State: closed - Opened by Mia1349 over 2 years ago - 1 comment