InformaticsMatters/pipelines-utils issues and pull requests

#47 - Bump setuptools from 51.3.3 to 65.5.1

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#46 - Bump wheel from 0.36.2 to 0.38.1

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#45 - - Should add the ability to trigger 'pipelines'

Pull Request - State: closed - Opened by alanbchristie almost 5 years ago

#44 - Simplify pipelines utils rdkit versioning

Pull Request - State: closed - Opened by alanbchristie almost 5 years ago

#43 - - Leaner and clearer requirements

Pull Request - State: closed - Opened by alanbchristie over 5 years ago

#42 - Too many requirements files?

Issue - State: closed - Opened by alanbchristie over 5 years ago - 1 comment

#41 - use groovy 3.0.0's YamlScraper

Issue - State: open - Opened by alanbchristie almost 6 years ago

#40 - - Pipeline Tester moved to 'yml' service descriptors

Pull Request - State: closed - Opened by alanbchristie almost 6 years ago

#39 - Switch to YAML-based service descriptors

Issue - State: closed - Opened by alanbchristie almost 6 years ago - 1 comment

#38 - The docker mounts need to be SELinux (Z)

Issue - State: open - Opened by alanbchristie over 6 years ago

#37 - The test is unable to handle optional parameters

Issue - State: open - Opened by alanbchristie over 6 years ago - 1 comment

#36 - Publish to external repo (maven/bintray)

Issue - State: open - Opened by alanbchristie over 6 years ago

#35 - 34 add file selector utility

Pull Request - State: closed - Opened by alanbchristie almost 7 years ago

#34 - Add file selector utility

Issue - State: open - Opened by alanbchristie almost 7 years ago

#33 - Remove escapeString() from Tester.groovy

Issue - State: open - Opened by alanbchristie almost 7 years ago

#32 - Potential issues with Python 3.6

Issue - State: open - Opened by alanbchristie almost 7 years ago

#31 - Repackaging

Pull Request - State: closed - Opened by alanbchristie almost 7 years ago

#30 - Repackaging

Pull Request - State: closed - Opened by alanbchristie almost 7 years ago

#29 - Ability to specify input files

Issue - State: closed - Opened by alanbchristie almost 7 years ago

#28 - Would be nice to run all tests in a file (or files)

Issue - State: open - Opened by alanbchristie almost 7 years ago

#27 - Ability to 'see' stdout and stderr

Issue - State: closed - Opened by alanbchristie almost 7 years ago

#26 - Execution of dockerised tests leaves containers dangling

Issue - State: closed - Opened by tdudgeon almost 7 years ago - 1 comment
Labels: bug

#25 - Separate utils and RDKit utils?

Issue - State: closed - Opened by alanbchristie about 7 years ago

#24 - Move tester to its own repo?

Issue - State: open - Opened by alanbchristie about 7 years ago

#23 - Issue 15

Pull Request - State: closed - Opened by alanbchristie about 7 years ago

#22 - Publish pipelines-utils to PIP

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#21 - Report dsd files that have no test file

Issue - State: open - Opened by alanbchristie about 7 years ago

#20 - Add ability to skip docker test

Issue - State: open - Opened by alanbchristie about 7 years ago

#19 - Validate service descriptor parameter value types

Issue - State: open - Opened by alanbchristie about 7 years ago

#18 - Create missing test files

Issue - State: open - Opened by alanbchristie about 7 years ago

#17 - Stop on first failure option

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#16 - Issue 10

Pull Request - State: closed - Opened by alanbchristie about 7 years ago

#15 - Investigate basic CI using Travis

Issue - State: closed - Opened by alanbchristie about 7 years ago

#14 - Now validates against used outputDescriptor definitions

Pull Request - State: closed - Opened by alanbchristie about 7 years ago

#13 - - Initial patch for File.separator regex issue

Pull Request - State: closed - Opened by alanbchristie about 7 years ago

#12 - Groovy (Windows/32) would not find client or server

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#11 - Improve day-zero installation documentation

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#10 - Windows error (File.separator)

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#9 - Validate against i/o descriptors

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#8 - Pull docker execution changes

Pull Request - State: closed - Opened by alanbchristie about 7 years ago

#7 - Add container execution of pipelines

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#6 - Where should show_feats live?

Issue - State: open - Opened by alanbchristie about 7 years ago - 1 comment

#5 - Consider housing poised_filter and others

Issue - State: open - Opened by alanbchristie about 7 years ago

#4 - Add and expose version number of PipelineTester?

Issue - State: closed - Opened by alanbchristie about 7 years ago - 1 comment

#3 - Detect pipelines not tested

Issue - State: open - Opened by alanbchristie about 7 years ago

#2 - Is Config the right format?

Issue - State: open - Opened by alanbchristie about 7 years ago

#1 - Detect duplicate test names

Issue - State: open - Opened by alanbchristie about 7 years ago

GitHub / InformaticsMatters/pipelines-utils issues and pull requests