ImperialCollegeLondon/pyrealm issues and pull requests

#220 - Rebuild of QA chain using ruff

Pull Request - State: closed - Opened by davidorme 5 months ago - 1 comment

#219 - Explore use of `ruff`

Issue - State: closed - Opened by davidorme 5 months ago

#218 - Switched to `pre-commit.ci`

Pull Request - State: closed - Opened by davidorme 5 months ago - 1 comment

#217 - Switch to pre-commit.ci

Issue - State: open - Opened by davidorme 5 months ago

#217 - Switch to pre-commit.ci

Issue - State: closed - Opened by davidorme 5 months ago

#216 - Scaling profiling datasets

Pull Request - State: closed - Opened by davidorme 6 months ago - 3 comments

#215 - Scaling problems with profiling on GitHub Actions and locally

Issue - State: closed - Opened by davidorme 6 months ago
Labels: bug

#215 - Scaling problems with profiling on GitHub Actions and locally

Issue - State: open - Opened by davidorme 6 months ago
Labels: bug

#214 - Python version bug in pyrealm_profiling.yaml

Pull Request - State: closed - Opened by davidorme 6 months ago - 1 comment

#213 - Profiling python version parsed as float

Issue - State: closed - Opened by davidorme 6 months ago
Labels: bug

#212 - Updating development docs

Pull Request - State: closed - Opened by davidorme 6 months ago - 1 comment

#211 - Fixing profile workflow

Pull Request - State: closed - Opened by davidorme 6 months ago - 1 comment

#210 - New profiling workflow uses bad runner id

Issue - State: closed - Opened by davidorme 6 months ago
Labels: bug

#209 - Development docs

Issue - State: closed - Opened by davidorme 6 months ago

#208 - Fixing profiling issues

Pull Request - State: closed - Opened by davidorme 6 months ago - 7 comments

#207 - Profiling issues

Issue - State: closed - Opened by davidorme 6 months ago
Labels: bug

#206 - Prepare release 1.0.0

Issue - State: closed - Opened by davidorme 6 months ago - 1 comment

#205 - Streamline the import of modules in tests

Issue - State: closed - Opened by surbhigoel77 6 months ago

#202 - Remove support for Python 3.9

Pull Request - State: closed - Opened by davidorme 6 months ago - 2 comments

#201 - Attempting to make PModelConst inherit CoreConst

Pull Request - State: open - Opened by tztsai 6 months ago - 1 comment

#200 - Setup trusted publishing

Pull Request - State: open - Opened by davidorme 6 months ago - 1 comment

#199 - Remove outdated FastSlowPModel

Pull Request - State: closed - Opened by davidorme 6 months ago

#198 - Setup trusted publishing

Issue - State: open - Opened by davidorme 6 months ago

#197 - Remove outdated FastSlowPModel

Issue - State: closed - Opened by davidorme 6 months ago - 1 comment

#196 - Remove support for Python 3.9

Issue - State: closed - Opened by davidorme 6 months ago

#196 - Remove support for Python 3.9

Issue - State: open - Opened by davidorme 6 months ago

#195 - Break the profiling report script up into functions

Issue - State: open - Opened by davidorme 7 months ago

#194 - Allowing incomplete days

Pull Request - State: closed - Opened by davidorme 7 months ago - 1 comment

#193 - Handle NaNs when calculating max difference in `Splash.estimate_initial_soil_moisture`

Pull Request - State: closed - Opened by tztsai 7 months ago - 4 comments

#192 - Verbose mode in SPLASH `estimate_initial_soil_moisture` doesn't handle `np.nan`

Issue - State: closed - Opened by davidorme 7 months ago
Labels: bug

#191 - Write a test for `PModel environment` to check for any abrupt outputs

Issue - State: open - Opened by surbhigoel77 7 months ago - 1 comment

#190 - Fastslow initval

Pull Request - State: open - Opened by surbhigoel77 7 months ago - 5 comments
Labels: enhancement, rse

#189 - Consider storing data in a separate repository

Issue - State: open - Opened by MarionBWeinzierl 7 months ago
Labels: enhancement, rse

#188 - Update `profiling/report.py` and its documentation

Pull Request - State: closed - Opened by tztsai 7 months ago - 1 comment
Labels: enhancement

#187 - Use a function `eval_poly` for polynomial evaluation

Pull Request - State: closed - Opened by tztsai 7 months ago - 4 comments
Labels: enhancement

#186 - Fix time handling in Splash

Pull Request - State: closed - Opened by tztsai 7 months ago - 2 comments

#185 - Add code to generate SPLASH golden datasets

Pull Request - State: closed - Opened by davidorme 7 months ago - 8 comments

#184 - Add code used to generate 'golden' datasets using the original SPLASH implentation into `pyrealm_build_data/splash`

Issue - State: closed - Opened by davidorme 7 months ago

#183 - New subdaily pmodel implementation

Pull Request - State: closed - Opened by davidorme 7 months ago - 2 comments

#182 - Fixing missing attribute docstrings in `core.calendar`

Pull Request - State: closed - Opened by davidorme 7 months ago - 3 comments

#181 - Profiling of the `Splash` module

Pull Request - State: closed - Opened by tztsai 8 months ago - 1 comment
Labels: enhancement, rse

#180 - Update to the latest versions of checkout and setup-python actions

Pull Request - State: closed - Opened by tztsai 8 months ago - 1 comment

#179 - Use a statistical model fitted to the original dataset to synthesize data

Pull Request - State: open - Opened by tztsai 8 months ago - 8 comments
Labels: enhancement, rse

#178 - Update github actions.

Issue - State: closed - Opened by davidorme 8 months ago - 1 comment
Labels: bug

#177 - Draft new subdaily PModel class that uses the `PModel` and `OptimalChi` code directly,

Issue - State: closed - Opened by davidorme 8 months ago

#176 - Let flake8 ignore E203

Pull Request - State: closed - Opened by tztsai 8 months ago - 1 comment

#175 - Add additional boundary checks in the `Splash` module

Issue - State: closed - Opened by tztsai 8 months ago - 1 comment
Labels: enhancement

#174 - Some tests produce out of bound errors

Issue - State: closed - Opened by tztsai 8 months ago - 3 comments
Labels: bug

#173 - Regression test of `splash.evap` does not pass

Issue - State: closed - Opened by tztsai 9 months ago - 2 comments
Labels: bug

#172 - Draft implementation of new OptimalChi structure

Pull Request - State: closed - Opened by davidorme 9 months ago - 6 comments

#171 - hotfix test_evap.py

Pull Request - State: closed - Opened by tztsai 9 months ago

#170 - Add unit tests for splash

Pull Request - State: closed - Opened by tztsai 9 months ago - 10 comments
Labels: enhancement

#169 - Handling of incomplete days in FastSlowScaler

Pull Request - State: closed - Opened by MarionBWeinzierl 9 months ago - 8 comments
Labels: enhancement

#168 - Revise description of C3C4 model to clarify estimation of proportion of C3 GPP from trees.

Issue - State: open - Opened by davidorme 9 months ago
Labels: documentation

#167 - Investigate using `np.polynomial.Polynomial`

Issue - State: closed - Opened by davidorme 9 months ago - 4 comments
Labels: enhancement, core devs, rse

#166 - Add `splash` to profiling suite.

Issue - State: closed - Opened by davidorme 9 months ago - 1 comment

#165 - Fix time handling in SPLASH

Issue - State: closed - Opened by davidorme 9 months ago - 4 comments
Labels: bug

#164 - Missing attribute docstrings in `core.calendar`

Issue - State: closed - Opened by davidorme 9 months ago
Labels: bug

#163 - Create a graphical overview of Pyrealm

Issue - State: open - Opened by surbhigoel77 9 months ago

#163 - Create a graphical overview of Pyrealm

Issue - State: open - Opened by surbhigoel77 9 months ago
Labels: documentation

#162 - Create unit tests for SPLASH module

Issue - State: closed - Opened by MarionBWeinzierl 9 months ago - 1 comment
Labels: enhancement

#161 - Let `PModelConst` inherit `CoreConst`

Issue - State: open - Opened by tztsai 9 months ago
Labels: enhancement

#160 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 9 months ago

#159 - Revert "Add profiling to CI workflow"

Pull Request - State: closed - Opened by tztsai 10 months ago

#158 - update CI

Pull Request - State: closed - Opened by tztsai 10 months ago - 1 comment

#157 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 10 months ago

#156 - Add profiling to CI workflow

Pull Request - State: closed - Opened by tztsai 10 months ago - 3 comments

#155 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 10 months ago

#154 - Update pyproject.toml

Pull Request - State: closed - Opened by tztsai 10 months ago - 1 comment

#153 - Add unit tests

Pull Request - State: closed - Opened by surbhigoel77 10 months ago - 10 comments
Labels: enhancement

#152 - Call graph is not generated in CI given the cmd option `--profile-svg` even though `graphviz` is installed.

Issue - State: closed - Opened by tztsai 10 months ago - 2 comments
Labels: bug

#151 - Split the tests directory into unit and regression

Pull Request - State: closed - Opened by surbhigoel77 10 months ago - 3 comments

#150 - Version issue of `pre-commit` installed by `poetry install`

Issue - State: closed - Opened by tztsai 10 months ago
Labels: bug

#149 - Add small dataset for profiling

Pull Request - State: closed - Opened by tztsai 10 months ago - 14 comments
Labels: enhancement

#148 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 10 months ago

#147 - Updating the information on generating profiling call graph

Pull Request - State: closed - Opened by surbhigoel77 10 months ago - 2 comments
Labels: documentation, rse

#146 - Update CONTRIBUTING.md

Pull Request - State: closed - Opened by tztsai 11 months ago - 7 comments
Labels: documentation, rse

#145 - Add information about how to create the profiling call graph

Issue - State: closed - Opened by MarionBWeinzierl 11 months ago - 1 comment
Labels: documentation, rse

#144 - Add the usage of `git lfs` in `CONTRIBUTING.md`

Issue - State: closed - Opened by tztsai 11 months ago - 2 comments
Labels: documentation, rse

#143 - Split tests into unit tests and regression tests

Issue - State: closed - Opened by MarionBWeinzierl 11 months ago
Labels: enhancement, rse

#142 - Add profiling to CI - Performance regression testing

Issue - State: closed - Opened by MarionBWeinzierl 11 months ago - 2 comments
Labels: enhancement, rse

#141 - Modularise and improve profiling

Issue - State: closed - Opened by MarionBWeinzierl 11 months ago - 1 comment
Labels: enhancement, rse

#140 - Use smaller data set for profiling

Issue - State: closed - Opened by MarionBWeinzierl 11 months ago - 1 comment
Labels: enhancement, rse

#139 - Create core module

Pull Request - State: closed - Opened by MarionBWeinzierl 11 months ago - 3 comments
Labels: enhancement, roadmap

#138 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 11 months ago

#137 - Update pre-commit hooks

Pull Request - State: closed - Opened by github-actions[bot] 11 months ago

#136 - Split pmodel file

Pull Request - State: closed - Opened by MarionBWeinzierl 12 months ago - 10 comments
Labels: enhancement, code review, rse

#135 - Application of the T Model allocation process to estimate plant growth and hence simulate the dynamics of plant growth through time.

Issue - State: open - Opened by davidorme 12 months ago

GitHub / ImperialCollegeLondon/pyrealm issues and pull requests