Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ImagingDataCommons/highdicom issues and pull requests

#305 - Preparation for 0.23.0 release

Pull Request - State: closed - Opened by CPBridge 7 days ago
Labels: enhancement

#304 - Add further_source_images option to segmentation

Pull Request - State: closed - Opened by CPBridge 7 days ago
Labels: enhancement

#303 - Add SR "get_evidence" methods

Pull Request - State: closed - Opened by CPBridge 7 days ago

#302 - Issue with Generating a Single Segmentation Object for Multiple DICOM Series in `highdicom`

Issue - State: open - Opened by Rishabhpanacea 13 days ago - 2 comments
Labels: enhancement

#301 - Fixes for pydicom 3

Pull Request - State: closed - Opened by CPBridge 16 days ago
Labels: bug

#300 - Pydicom 3 breakages

Issue - State: closed - Opened by CPBridge 21 days ago - 2 comments
Labels: bug

#299 - Add segments to highdicom Segmentation object after its construction

Issue - State: open - Opened by ramyayyagari 22 days ago - 3 comments
Labels: question

#298 - Copy subject context

Pull Request - State: closed - Opened by CPBridge 3 months ago
Labels: enhancement

#297 - Fractional and Multisegment Pyramids

Pull Request - State: closed - Opened by CPBridge 3 months ago
Labels: enhancement

#296 - Enforce repo-review rules

Pull Request - State: closed - Opened by DimitriPapadopoulos 3 months ago - 1 comment

#295 - Remove references to np.float_

Pull Request - State: closed - Opened by CPBridge 3 months ago

#293 - setup.py → pyproject.toml

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago - 10 comments
Labels: enhancement

#292 - Enforce ruff/flake8-pyi rules (PYI)

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago - 3 comments

#291 - Enforce ruff/flynt rules (FLY)

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago

#290 - Enforce ruff rules (RUF)

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago

#289 - Add missing `:` after `noqa`

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago

#288 - Move from `setup.py` to `pyproject.toml`?

Issue - State: closed - Opened by DimitriPapadopoulos 4 months ago - 1 comment

#287 - Enforce ruff/pyupgrade rules (UP)

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago - 3 comments

#286 - Enforce ruff/bugbear rules (B)

Pull Request - State: closed - Opened by DimitriPapadopoulos 4 months ago

#285 - Further segmentation efficiency improvements

Pull Request - State: closed - Opened by CPBridge 4 months ago
Labels: enhancement

#284 - Only a single frame is supported when the source image has no Frame of Reference UID.

Issue - State: open - Opened by efimfurman 5 months ago - 2 comments
Labels: enhancement

#283 - Request for ReferencedSeriesUID accessor

Issue - State: open - Opened by DanielaSchacherer 5 months ago

#282 - WIP: Add coordinate transformer `for_image` classmethods

Pull Request - State: closed - Opened by CPBridge 6 months ago
Labels: enhancement

#281 - Additional tests for ANN coordinate type

Pull Request - State: closed - Opened by CPBridge 6 months ago
Labels: tests

#280 - Remove JP2 wrapper from JPEG 2000 encoding

Pull Request - State: closed - Opened by CPBridge 6 months ago - 4 comments
Labels: bug

#279 - Improve font in TID1500 figure

Pull Request - State: closed - Opened by CPBridge 6 months ago
Labels: documentation

#278 - Minor fixes for ANN graphics

Pull Request - State: closed - Opened by CPBridge 7 months ago

#277 - WIP: Volumetric Segmentations

Pull Request - State: open - Opened by CPBridge 8 months ago
Labels: enhancement

#276 - Further graphic data checks

Pull Request - State: closed - Opened by CPBridge 9 months ago

#275 - Issues with jpeg 2000 and `encode_frame`

Issue - State: closed - Opened by erikogabrielsson 10 months ago - 3 comments

#274 - Add highdicom to Contributing Equipment Sequence

Issue - State: open - Opened by CPBridge 10 months ago
Labels: enhancement

#273 - Should Subject Context be automatically copied from source images be default when constructing SRs

Issue - State: closed - Opened by CPBridge 10 months ago - 1 comment
Labels: enhancement

#272 - Add gitflow section to the developer guide

Pull Request - State: closed - Opened by CPBridge 10 months ago

#271 - Adopt a Contributor Convenant as code of conduct

Pull Request - State: closed - Opened by CPBridge 10 months ago

#270 - Fix wrong transfer syntax in test

Pull Request - State: closed - Opened by CPBridge 11 months ago
Labels: bug

#269 - Version 0.22.0

Pull Request - State: closed - Opened by CPBridge 11 months ago

#268 - http:// → https://

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#267 - Add Python 3.12 CI tests

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago - 13 comments

#266 - Update GitHub Actions

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#265 - `io.open()` → `open()`

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#264 - `x == y or x == z` → `x in (y, z)`

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#263 - Remove redundant `.keys()` call

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#262 - Use list comprehension where possible

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#261 - Creating a list from a list is equivalent to a copy

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#260 - Remove redundant cast

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago - 1 comment

#259 - Inheriting `object` is implicit in Python 3

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#258 - `coding: utf-8` is implicit in Python 3

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#257 - Deprecated exception alias: `IOError` → `OSError`

Pull Request - State: closed - Opened by DimitriPapadopoulos 12 months ago

#256 - Rename .readthedocs.yml to .readthedocs.yaml

Pull Request - State: closed - Opened by hackermd 12 months ago

#255 - Add checks on length of some basic parameter of the SOPClass constructor

Pull Request - State: closed - Opened by CPBridge about 1 year ago
Labels: bug

#254 - Set AnnotationAppliesToAllZPlanes only for 3D Annotation Groups

Pull Request - State: closed - Opened by CPBridge about 1 year ago
Labels: bug

#253 - Add function to create multiresolution segmentation pyramids

Pull Request - State: closed - Opened by CPBridge about 1 year ago
Labels: enhancement

#252 - Add ability to create multi-resolution segmentation pyramids

Issue - State: closed - Opened by CPBridge about 1 year ago - 1 comment
Labels: enhancement

#251 - Add ability to create TILED_FULL segmentations

Issue - State: closed - Opened by CPBridge about 1 year ago - 1 comment
Labels: enhancement

#250 - Update content.py

Pull Request - State: closed - Opened by elitalien about 1 year ago - 1 comment
Labels: documentation

#249 - Error with link in documentation.

Issue - State: closed - Opened by elitalien about 1 year ago - 2 comments
Labels: documentation

#248 - Improvements for working with tiled segmentations

Pull Request - State: closed - Opened by CPBridge about 1 year ago - 1 comment
Labels: enhancement

#247 - Cannot open custom highdicom derived SC DICOM in ITK-Snap

Issue - State: open - Opened by tomaroberts about 1 year ago - 8 comments
Labels: question

#246 - Specimen description and preparation step fixes

Pull Request - State: closed - Opened by erikogabrielsson about 1 year ago - 6 comments

#245 - Multiprocessing for frame encoding in Segmentation constructor

Pull Request - State: closed - Opened by CPBridge about 1 year ago - 1 comment
Labels: enhancement

#244 - work around pillow 10.0.0 changes

Pull Request - State: closed - Opened by CPBridge about 1 year ago - 2 comments
Labels: bug

#242 - Correctly account for Cr and Cb subsampling for native YBR_FULL_422

Pull Request - State: closed - Opened by CPBridge about 1 year ago - 4 comments
Labels: bug

#241 - ImageFileReader does not instantiate image object (sometimes)

Issue - State: closed - Opened by cheyvaert-medexprim about 1 year ago - 8 comments
Labels: bug

#240 - Convert plane positions to plane position slide sequence

Pull Request - State: closed - Opened by thomas-albrecht over 1 year ago - 2 comments
Labels: bug

#239 - Fixes to various VRs flagged by tests

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: bug

#238 - Exclude incompatible pydicom 2.4.0 in setup.py

Pull Request - State: closed - Opened by CPBridge over 1 year ago - 1 comment
Labels: bug

#237 - codespell: config, workflow + typos fixed

Pull Request - State: closed - Opened by yarikoptic over 1 year ago
Labels: documentation

#234 - Add "labelmap" segmentations

Pull Request - State: open - Opened by CPBridge over 1 year ago - 8 comments

#233 - Pydicom 2.4.0 breaks highdicom (TypeError: unhashable type: Dataset)

Issue - State: closed - Opened by CPBridge over 1 year ago - 4 comments
Labels: bug

#232 - #231 convert plane position sequences to hd.PlanePositionSlideSequence

Pull Request - State: closed - Opened by thomas-albrecht over 1 year ago - 7 comments
Labels: bug

#230 - ANN parsing improvements

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: enhancement

#229 - Allow duplicate entries in ReferencedSeriesSequence

Pull Request - State: closed - Opened by CPBridge over 1 year ago

#228 - Missing support for TID 4300

Issue - State: open - Opened by fordanic over 1 year ago - 2 comments
Labels: enhancement

#227 - Improve Segmentation Creation Efficiency

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: enhancement

#226 - Allow LongCodeValue and URNCodeValue, add tests

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: bug

#225 - Coded Concept with Long Code Value

Issue - State: closed - Opened by wryan-itk over 1 year ago - 2 comments
Labels: bug

#224 - Tweaks Following Segmentation Update

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: bug, tests

#223 - Handle DicomFileLike

Pull Request - State: closed - Opened by RobinFrcd over 1 year ago - 7 comments
Labels: bug

#222 - Can't read a DicomBytesIO with ImageFileReader

Issue - State: closed - Opened by RobinFrcd over 1 year ago - 2 comments

#221 - Refactor check for described segments to remove unnecessary copies

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: bug

#220 - Fix ReferenceImageSequence

Pull Request - State: closed - Opened by CPBridge over 1 year ago - 1 comment
Labels: bug

#219 - Improve User Guide

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: documentation

#218 - conversion of DICOM Segmentation object to nifti file

Issue - State: open - Opened by deepakri201 over 1 year ago - 2 comments

#217 - Add Python 3.11 to unit tests matrix

Pull Request - State: closed - Opened by CPBridge over 1 year ago - 1 comment
Labels: enhancement

#216 - Allow SR content parameter to be single element sequence

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: enhancement

#215 - Implement srread function

Pull Request - State: closed - Opened by CPBridge over 1 year ago
Labels: enhancement

#214 - Wrong Segmentation Position when opening with CornerstoneTools

Issue - State: closed - Opened by AlexandrineRibeiro over 1 year ago - 4 comments
Labels: bug, question

#213 - TrackingIdentifier / TrackingUniqueIdentifier should not be mandatory in all cases

Issue - State: closed - Opened by fedorov over 1 year ago - 3 comments
Labels: question

#212 - Update URL of git repository

Pull Request - State: closed - Opened by hackermd almost 2 years ago

#211 - Multivalue VOI window attributes in presentation states

Pull Request - State: closed - Opened by CPBridge almost 2 years ago - 2 comments
Labels: bug

#210 - Failure to create GSPS when reference DICOM uses "MultiValue" for WindowCenter, WindowWidth

Issue - State: closed - Opened by delton137 almost 2 years ago - 5 comments
Labels: bug

#209 - Fix docstrings of transformer classes

Pull Request - State: closed - Opened by CPBridge almost 2 years ago
Labels: documentation

#208 - Seg Array Optimization

Pull Request - State: closed - Opened by CPBridge almost 2 years ago - 7 comments
Labels: enhancement

#207 - Optionally skip deepcopy in `from_dataset` methods

Pull Request - State: closed - Opened by CPBridge almost 2 years ago - 1 comment

#206 - Increase package version for release

Pull Request - State: closed - Opened by CPBridge almost 2 years ago