Image-X-Institute/mri_distortion_toolkit issues and pull requests

#277 - remove `assert` in _add_B0_to_gradient - it is handled more elegantly below anyway

Issue - State: open - Opened by bwheelz36 9 months ago

#276 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 9 months ago

#275 - Update index.rst

Pull Request - State: closed - Opened by bwheelz36 9 months ago

#274 - found another pandas future warning

Pull Request - State: closed - Opened by bwheelz36 9 months ago

#273 - updated to surpress pandas future warning

Pull Request - State: closed - Opened by bwheelz36 9 months ago - 1 comment

#272 - add translation test, remove cast to int on rotate

Pull Request - State: closed - Opened by bwheelz36 10 months ago - 1 comment

#271 - remove cast to int from rotate markers

Pull Request - State: closed - Opened by bwheelz36 10 months ago - 1 comment

#270 - fixed cast to integer in translate markers

Pull Request - State: closed - Opened by bwheelz36 10 months ago - 1 comment

#269 - `translate markers` - inputs are cast to integer

Issue - State: closed - Opened by brendan-whelan-seetreat 10 months ago

#268 - Add files via upload

Pull Request - State: closed - Opened by bwheelz36 10 months ago

#267 - Fin2 bw dev

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago

#266 - Fin2

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago

#265 - Update setup.cfg

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago - 1 comment

#264 - Doc update3

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago

#263 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago

#262 - commenting on example and adding suggestions

Pull Request - State: closed - Opened by bwheelz36 about 1 year ago

#261 - Update phantom_imaging.md

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#260 - Update init.py version

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#259 - Update Harmonics.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#258 - sometimes have to multiple Gz by -1 in distortion correction

Issue - State: open - Opened by bwheelz36 over 1 year ago
Labels: bug

#257 - update Reporter plots

Issue - State: open - Opened by bwheelz36 over 1 year ago

#256 - update plot harmonics plot

Issue - State: closed - Opened by bwheelz36 over 1 year ago

#255 - Update phantom_imaging.md

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#254 - distortion correction: add a B0 correction in the slice encode direction

Issue - State: open - Opened by bwheelz36 over 1 year ago
Labels: enhancement

#253 - add intensity correction to the image domain distortion correction

Issue - State: open - Opened by bwheelz36 over 1 year ago
Labels: enhancement

#252 - add 'total distortion' plot to Reports

Issue - State: open - Opened by bwheelz36 over 1 year ago
Labels: enhancement

#251 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#250 - Update get dicom data

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#249 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#248 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#247 - New plot

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#246 - Update MarkerAnalysis.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#245 - add this plot to `MatchedMarkerVolumes`

Issue - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment
Labels: enhancement

#244 - Update MarkerAnalysis.py report

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#243 - Update Reports.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#242 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#241 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#240 - Update build_docs.yml

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#239 - Report names

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#238 - add ability for users to add names to reporting

Issue - State: closed - Opened by bwheelz36 over 1 year ago

#237 - fix location that report get written to; doesnt seem to respect input

Issue - State: closed - Opened by bwheelz36 over 1 year ago

#236 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#235 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#234 - Update MarkerAnalysis.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#233 - Update DistortionCorrection.py

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#232 - Update index.rst

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#231 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#230 - Franken goam2

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#229 - Update index.rst

Pull Request - State: closed - Opened by bwheelz36 over 1 year ago

#228 - install fails with python 3.11

Issue - State: closed - Opened by bwheelz36 over 1 year ago - 1 comment

#227 - meeting with Trevor: suggestions

Issue - State: open - Opened by bwheelz36 almost 2 years ago - 1 comment

#226 - update add harmonics to B0 in Distortion correction

Issue - State: closed - Opened by bwheelz36 almost 2 years ago

#225 - fix MarkerAnalysis

Issue - State: closed - Opened by bwheelz36 almost 2 years ago

#224 - update combine gradient harmonics so order matches gradient order:

Issue - State: closed - Opened by bwheelz36 almost 2 years ago - 1 comment

#223 - Fix this link

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#222 - Bw dev

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#221 - load csv data directly into HarmonicFit

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#220 - various minor fixes

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#219 - add read opera data to utilities

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#218 - adding transform markers function

Pull Request - State: closed - Opened by paulzyliu about 2 years ago

#217 - Bw dev2

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#216 - Added function to remove unmatchable markers from distorted markers l…

Pull Request - State: closed - Opened by paulzyliu about 2 years ago

#215 - Add b0 harmonics

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#214 - update from main

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#213 - Improve output images

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#212 - are we still getting flipped z coordinates in some distorted corrected images?

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#211 - Bw dev

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#210 - Distortion correction without dicom_data

Pull Request - State: closed - Opened by paulzyliu about 2 years ago

#209 - Support siemens phase map images

Issue - State: open - Opened by bwheelz36 about 2 years ago
Labels: enhancement

#208 - Bw dev

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#207 - script to save images (uses plot only on bw_dev branch)

Issue - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#206 - Dist correction docs

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#205 - Field units

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#204 - add B0 harmonics to gradient harmonics

Issue - State: closed - Opened by bwheelz36 about 2 years ago - 3 comments

#203 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#202 - Tidy docs

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#201 - fix doc string

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#200 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#199 - Remove built HTML from docssrc

Issue - State: open - Opened by bwheelz36 about 2 years ago

#198 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#197 - version update

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#196 - Update PhantomDesigner.py

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#195 - Update phantom_design.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#194 - add note to docs about pointing to code in freeCAD

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#193 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#192 - think I fixed #109

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#191 - add phantom design figure to docs

Issue - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#190 - find free cad libraries

Issue - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#189 - remove indices and tables heading

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#188 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#187 - Update README.md

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#186 - Fix docs

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#185 - Add phantom design

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#184 - fix broken hyperlink

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#183 - Update init.py

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#182 - Fix #180

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

#181 - Phillips dicom contains a non-image file; need to skip this

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#180 - fix iso-center offset issue in distortion correction codes

Issue - State: closed - Opened by bwheelz36 about 2 years ago

#179 - Add sequence to dicom data

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago - 1 comment

#178 - add pypi release badge

Pull Request - State: closed - Opened by bwheelz36 about 2 years ago

GitHub / Image-X-Institute/mri_distortion_toolkit issues and pull requests