Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / IMSY-DKFZ/simpa issues and pull requests
#263 - Minimal optical simulation example and diffuse reflectance
Pull Request -
State: open - Opened by leoyala 8 months ago
#262 - Update pre-commit hook checking for license text to only consider the license and not the specific copyright information
Issue -
State: open - Opened by seitela 9 months ago
Labels: bug
#261 - Fixed time spacing bug in reconstruction convenience function
Pull Request -
State: open - Opened by TomTomRixRix 10 months ago
#260 - Custom time spacing is not considered in DAS reconstruction convenience function
Issue -
State: open - Opened by TomTomRixRix 10 months ago
Labels: bug
#259 - Simpler minimal optical simulation example
Issue -
State: open - Opened by leoyala 11 months ago
Labels: feature
#258 - Bump urllib3 from 2.0.4 to 2.0.7
Pull Request -
State: open - Opened by dependabot[bot] 12 months ago
Labels: dependencies, python
#257 - [1, 1, 1] origin used in MCX
Issue -
State: open - Opened by faberno 12 months ago
Labels: bug
#256 - Use pmcx instead of mcx binary
Pull Request -
State: open - Opened by lkeegan about 1 year ago
#255 - Bump pillow from 10.0.0 to 10.0.1
Pull Request -
State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python
#254 - Bump urllib3 from 2.0.4 to 2.0.6
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies, python
#253 - Use gpu for noise generation if available
Pull Request -
State: open - Opened by lkeegan about 1 year ago
#252 - removed gel_layer_height in simulate_3D.m
Pull Request -
State: open - Opened by faberno about 1 year ago
- 1 comment
#251 - Fix ignored acoustical_simulation_3d
Pull Request -
State: open - Opened by faberno about 1 year ago
- 1 comment
#250 - added missing spacing to error message
Pull Request -
State: open - Opened by faberno about 1 year ago
- 1 comment
#249 - Wrong error message in curved_array.check_settings_prerequisites
Issue -
State: open - Opened by faberno about 1 year ago
Labels: bug
#248 - Error in minimal_optical_simulation.py
Issue -
State: open - Opened by hhapk about 1 year ago
- 3 comments
#247 - Saving norm in a variable named norm_direction_vector_mm
Pull Request -
State: open - Opened by Kamkarl about 1 year ago
- 3 comments
Labels: hacktoberfest-accepted
#246 - Specify mc2 output file format for mcx
Pull Request -
State: open - Opened by lkeegan about 1 year ago
#245 - MCX default output file format changed
Issue -
State: open - Opened by lkeegan about 1 year ago
#244 - don't run pypi publish action on forks
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
#243 - Create simulation volumes on the GPU
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
- 2 comments
#242 - Reduce gpu ram use in EllipticalTubularStructure
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
- 1 comment
#241 - Add profile decorator to simpa utils
Pull Request -
State: open - Opened by lkeegan about 1 year ago
- 5 comments
#240 - T239 wavelength independent volume creation
Pull Request -
State: closed - Opened by kdreher about 1 year ago
#239 - Create wavelength-independent data fields only once in a simulation run
Issue -
State: closed - Opened by kdreher about 1 year ago
Labels: feature
#238 - speed up `assert_array_well_defined()`
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
#237 - GEL_LAYER_HEIGHT in simulate_3d
Issue -
State: open - Opened by faberno about 1 year ago
Labels: bug, good first issue
#236 - Improve generate_mcx_bin_input performance
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
#235 - Fix relative path issue in reconstruction_module_time_reversal_adapter.py matlab command
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
#234 - use process unique file naming for kwave files
Pull Request -
State: open - Opened by jnoelke about 1 year ago
#233 - Time_series
Issue -
State: closed - Opened by mojgan-zare about 1 year ago
- 9 comments
#232 - Trouble during installation (UnicodeDecodeError)
Issue -
State: open - Opened by cwsbest about 1 year ago
- 1 comment
#231 - Develop
Pull Request -
State: closed - Opened by kdreher about 1 year ago
#230 - Merge develop into main
Pull Request -
State: closed - Opened by kdreher about 1 year ago
#229 - Bump myst-parser from 0.18.1 to 1.0.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies, python
#228 - Bump actions/setup-python from 2 to 4
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies, github_actions
#227 - Bump actions/checkout from 2 to 3
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies, github_actions
#226 - Bump JRubics/poetry-publish from 1.16 to 1.17
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies, github_actions
#225 - Develop
Pull Request -
State: closed - Opened by kdreher about 1 year ago
#224 - Improve performance and reduce memory use of mcx io
Pull Request -
State: closed - Opened by lkeegan about 1 year ago
#223 - Bug: ACOUSTIC_SIMULATION_3D is ignored
Issue -
State: open - Opened by faberno about 1 year ago
Labels: good first issue
#222 - Negative fraction of muscle_scatterer in soft_tissue
Issue -
State: open - Opened by dkalsan over 1 year ago
#221 - User should get a warning when properties for a wavelength do not exist
Issue -
State: open - Opened by dkalsan over 1 year ago
#220 - Video of optical simulation
Issue -
State: open - Opened by cbender98 over 1 year ago
Labels: feature
#219 - Bump requests from 2.28.2 to 2.31.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 1 comment
Labels: dependencies
#218 - T217 GaussianBeam bug + focal length
Pull Request -
State: closed - Opened by faberno over 1 year ago
#217 - GaussianBeamIlluminationGeometry: Add focal length and bugfix
Issue -
State: closed - Opened by faberno over 1 year ago
#216 - Injects git commit hash
Pull Request -
State: open - Opened by TomTomRixRix over 1 year ago
#215 - file naming of temporary kwave input and output .h5 -files leads to error in multiprocessed scripts
Issue -
State: open - Opened by cbender98 over 1 year ago
#214 - Wrong normalization in SlitIlluminationGeometry
Issue -
State: open - Opened by faberno over 1 year ago
Labels: good first issue
#213 - Bump markdown-it-py from 2.1.0 to 2.2.0
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#212 - Add pre-commit hooks to the repo
Pull Request -
State: closed - Opened by TomTomRixRix over 1 year ago
#211 - Dead links in getting started markdown
Issue -
State: open - Opened by TomTomRixRix over 1 year ago
Labels: bug, good first issue
#210 - Create template for pull requests
Pull Request -
State: closed - Opened by seitela over 1 year ago
Labels: feature
#209 - Update issue templates
Pull Request -
State: closed - Opened by seitela over 1 year ago
#208 - Fix randomness in vessel tree test
Issue -
State: open - Opened by TomTomRixRix over 1 year ago
Labels: bug, testing
#207 - T206 io bottleneck
Pull Request -
State: closed - Opened by jnoelke over 1 year ago
#206 - I/O bottleneck
Issue -
State: open - Opened by jnoelke over 1 year ago
#205 - Default data fields in FieldOfViewCropping
Issue -
State: open - Opened by mschllnbrg over 1 year ago
Labels: bug, good first issue
#204 - inconsistent y-slicing of 3d data fields like initial pressure (maybe connected to off by one error)
Issue -
State: open - Opened by cbender98 over 1 year ago
#203 - T202 head and neck
Pull Request -
State: closed - Opened by mschllnbrg over 1 year ago
#202 - Adding Lymph Node as new Tissue Type
Issue -
State: open - Opened by mschllnbrg over 1 year ago
Labels: feature
#201 - kWaveArray addition now included in kWave 1.4
Issue -
State: closed - Opened by faberno over 1 year ago
- 1 comment
#200 - T199: using rfft and window function correction (considering edge cases)
Pull Request -
State: closed - Opened by cbender98 over 1 year ago
#199 - Weird Things in Tukey Bandpass Filter
Issue -
State: open - Opened by cbender98 over 1 year ago
#198 - Incompatible with latest Numpy version
Issue -
State: closed - Opened by tomelse over 1 year ago
- 2 comments
#197 - Develop
Pull Request -
State: closed - Opened by kdreher over 1 year ago
#196 - T191 numpy types
Pull Request -
State: closed - Opened by kdreher over 1 year ago
#195 - IPASC data format export
Issue -
State: open - Opened by jgroehl almost 2 years ago
- 1 comment
#194 - Quick fix: Upper bound for numpy version
Pull Request -
State: closed - Opened by TomTomRixRix almost 2 years ago
- 1 comment
#193 - PyPI management with github actions
Issue -
State: closed - Opened by jgroehl almost 2 years ago
- 4 comments
#192 - Troubleshooting during installation
Issue -
State: open - Opened by TomTomRixRix almost 2 years ago
Labels: documentation, good first issue
#191 - Fix `numpy` to <1.24.0
Issue -
State: closed - Opened by TomTomRixRix almost 2 years ago
- 1 comment
Labels: bug, good first issue
#190 - T187 bump jdata version (#188)
Pull Request -
State: closed - Opened by leoyala almost 2 years ago
#189 - Understanding initial pressure values
Issue -
State: closed - Opened by MengjieSHI almost 2 years ago
- 5 comments
#188 - T187 bump jdata version
Pull Request -
State: closed - Opened by leoyala almost 2 years ago
#187 - Fix `jdata` dependency to >= 0.5.2
Issue -
State: closed - Opened by leoyala almost 2 years ago
- 1 comment
#186 - Fluence numpy array is read-only.
Issue -
State: closed - Opened by tomelse almost 2 years ago
- 6 comments
#185 - Bug in KWaveAcousticForwardConvenienceFunction.py
Issue -
State: open - Opened by cbender98 almost 2 years ago
Labels: bug, testing
#184 - Bug in PointSourceReconstruction.py
Issue -
State: open - Opened by cbender98 almost 2 years ago
- 1 comment
Labels: bug, testing
#183 - T180 Refactoring
Pull Request -
State: open - Opened by jnoelke almost 2 years ago
- 3 comments
#182 - T115 include bvf
Pull Request -
State: open - Opened by jnoelke almost 2 years ago
#181 - Use same FOV definition within different reconstructions
Pull Request -
State: open - Opened by TomTomRixRix almost 2 years ago
- 3 comments
#180 - Refactoring of input arguments in tissue library
Issue -
State: open - Opened by mschllnbrg almost 2 years ago
Labels: good first issue
#179 - Incorporate Sensor Degradation Processing Component
Issue -
State: open - Opened by cbender98 about 2 years ago
Labels: feature
#178 - includes cup array PType307
Pull Request -
State: open - Opened by Holzwarth69126 about 2 years ago
- 1 comment
#177 - Include cup array (PType 307) as detection geometry
Issue -
State: open - Opened by Holzwarth69126 about 2 years ago
#176 - T162 heterogenous sos
Pull Request -
State: open - Opened by cbender98 about 2 years ago
- 1 comment
#175 - Structure creation on GPU
Pull Request -
State: closed - Opened by TomTomRixRix about 2 years ago
- 2 comments
#174 - T77 off by one error
Pull Request -
State: closed - Opened by TomTomRixRix about 2 years ago
#173 - Provide git commit hash
Issue -
State: open - Opened by TomTomRixRix about 2 years ago
- 1 comment
Labels: feature, help wanted
#172 - TissueLibrary and MOLECULE_LIBRARY usage inconsistent
Issue -
State: open - Opened by jgroehl about 2 years ago
Labels: good first issue
#171 - Windows tests seem to succeed despite errors
Issue -
State: open - Opened by TomTomRixRix about 2 years ago
Labels: bug, testing
#170 - Develop merge
Pull Request -
State: closed - Opened by kdreher about 2 years ago
#169 - T152 processing unit
Pull Request -
State: closed - Opened by TomTomRixRix about 2 years ago
- 1 comment
#168 - T9 additional flags
Pull Request -
State: open - Opened by seitela about 2 years ago
#167 - Citation of SIMPA paper
Pull Request -
State: closed - Opened by TomTomRixRix about 2 years ago
#166 - Rewrite structure creation for use of GPU
Issue -
State: closed - Opened by kdreher about 2 years ago
- 6 comments
Labels: hacking day
#165 - Github Actions/workflows/templates
Issue -
State: open - Opened by kdreher about 2 years ago
- 3 comments
Labels: hacking day
#164 - Consistent Tags
Issue -
State: open - Opened by kdreher about 2 years ago
- 1 comment
Labels: good first issue, hacking day