Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / IGS/gEAR issues and pull requests
#684 - V2 - Expression/Projection View - Fix full-width "expression-only" tSNE displays
Issue -
State: open - Opened by adkinsrs 7 months ago
- 1 comment
Labels: bug, Low Priority
#683 - V2 - Add "create URL" button from expression and projection pages
Issue -
State: open - Opened by adkinsrs 7 months ago
- 4 comments
Labels: enhancement
#681 - Fixing bug where single-gene curator would not plot
Pull Request -
State: closed - Opened by adkinsrs 7 months ago
#680 - Resolves #678
Pull Request -
State: closed - Opened by adkinsrs 7 months ago
#679 - Bugfix 678 beta comparison tool fails to show conditions after selecting a dataset
Pull Request -
State: closed - Opened by adkinsrs 7 months ago
- 2 comments
#678 - Beta comparison tool fails to show conditions after selecting a dataset
Issue -
State: closed - Opened by jorvis 7 months ago
Labels: bug
#677 - Use GCP resources to auto-shut down devel VMs if idle or off-business hrs
Issue -
State: open - Opened by adkinsrs 7 months ago
Labels: enhancement
#676 - Update SSL keys on devel
Issue -
State: closed - Opened by jorvis 7 months ago
#675 - Add (even temporary) support to disable downloads of selected datasets
Issue -
State: closed - Opened by jorvis 7 months ago
- 1 comment
#674 - V2 - update URL shortener "p" page
Issue -
State: open - Opened by adkinsrs 7 months ago
Labels: bug
#673 - Gene expression
Issue -
State: open - Opened by gear-portal-team 7 months ago
- 2 comments
#671 - Refactor dataset collection page for ui-v2
Issue -
State: open - Opened by adkinsrs 8 months ago
#671 - Refactor dataset collection page for ui-v2
Issue -
State: open - Opened by adkinsrs 8 months ago
#670 - Test upgrading scanpy/anndata
Issue -
State: open - Opened by adkinsrs 8 months ago
- 2 comments
Labels: enhancement, in_progress, code cleanup
#669 - Issue with clustering
Issue -
State: open - Opened by gear-portal-team 8 months ago
- 4 comments
#669 - Issue with clustering
Issue -
State: open - Opened by gear-portal-team 8 months ago
- 4 comments
#668 - Color customization in static tSNE/UMAP scatter plots
Issue -
State: closed - Opened by carlocolantuoni 8 months ago
- 6 comments
Labels: enhancement, PostProjectionTASKS, High Priority
#668 - Color customization in static tSNE/UMAP scatter plots
Issue -
State: closed - Opened by carlocolantuoni 8 months ago
- 6 comments
Labels: enhancement, PostProjectionTASKS, High Priority
#667 - High resolution .png download for static tSNE/MAP scatter plots
Issue -
State: open - Opened by carlocolantuoni 8 months ago
- 25 comments
Labels: enhancement, PostProjectionTASKS, High Priority
#666 - When projecting a weighted gene cart, if all weights are 1 or 0, then add "binary gene count" projection option
Issue -
State: closed - Opened by carlocolantuoni 8 months ago
- 2 comments
Labels: enhancement, PostProjectionTASKS
#666 - When projecting a weighted gene cart, if all weights are 1 or 0, then add "binary gene count" projection option
Issue -
State: closed - Opened by carlocolantuoni 8 months ago
- 2 comments
Labels: enhancement, PostProjectionTASKS
#665 - UI-V2 - Potential race condition loading plugins
Issue -
State: closed - Opened by adkinsrs 8 months ago
- 1 comment
Labels: bug
#665 - UI-V2 - Potential race condition loading plugins
Issue -
State: closed - Opened by adkinsrs 8 months ago
- 1 comment
Labels: bug
#664 - Ability to do some common expression normalizations in the dataset curators
Issue -
State: open - Opened by JPReceveur 8 months ago
- 6 comments
Labels: enhancement
#664 - Ability to do some common expression normalizations in the dataset curators
Issue -
State: open - Opened by JPReceveur 8 months ago
- 6 comments
Labels: enhancement
#663 - sc Workbench primary analysis error for non-tsne/umap coordinates
Issue -
State: open - Opened by JPReceveur 8 months ago
- 3 comments
Labels: bug
#663 - sc Workbench primary analysis error for non-tsne/umap coordinates
Issue -
State: open - Opened by JPReceveur 8 months ago
- 3 comments
Labels: bug
#662 - Dataset/Gene/Pattern selectors - Clear search results if text input field is cleared
Issue -
State: closed - Opened by adkinsrs 8 months ago
- 1 comment
#661 - Missing dataset in beta
Issue -
State: open - Opened by echrysostomou 9 months ago
#661 - Missing dataset in beta
Issue -
State: open - Opened by echrysostomou 9 months ago
#660 - Refactor user account creation page for UI-V2
Issue -
State: open - Opened by jorvis 9 months ago
Labels: enhancement, 8
#660 - Refactor user account creation page for UI-V2
Issue -
State: open - Opened by jorvis 9 months ago
Labels: enhancement, 8
#659 - Ensure history recording functions on main are also on ui-v2 branch
Issue -
State: closed - Opened by jorvis 9 months ago
- 1 comment
Labels: enhancement, 4
#659 - Ensure history recording functions on main are also on ui-v2 branch
Issue -
State: closed - Opened by jorvis 9 months ago
- 1 comment
Labels: enhancement, 4
#658 - Download Raw or Seurat Object
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 1 comment
#658 - Download Raw or Seurat Object
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 1 comment
#657 - Gene Collection Selector - Error when selecting "Recent"
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: bug
#657 - Gene Collection Selector - Error when selecting "Recent"
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: bug
#656 - ui-v2 Refactor projection search page
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: in_progress
#656 - ui-v2 Refactor projection search page
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: in_progress
#655 - UI v2 height addition
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
- 2 comments
#655 - UI v2 height addition
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
- 2 comments
#654 - UI v2 height addition
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#654 - UI v2 height addition
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#653 - Gene Mapping System Used in Inner Ear Organoid (Steinhart) Dataset
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 4 comments
#653 - Gene Mapping System Used in Inner Ear Organoid (Steinhart) Dataset
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 4 comments
#652 - UI v2 orthology refactoring
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#652 - UI v2 orthology refactoring
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#651 - Database download for enrichment analysis
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 2 comments
#651 - Database download for enrichment analysis
Issue -
State: closed - Opened by gear-portal-team 9 months ago
- 2 comments
#650 - Backport fixednmf v2 to v1
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#650 - Backport fixednmf v2 to v1
Pull Request -
State: closed - Opened by adkinsrs 9 months ago
#649 - Decouple orthology mapping from plotting API calls; Create "orthologs" dropdown
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: enhancement, code cleanup
#649 - Decouple orthology mapping from plotting API calls; Create "orthologs" dropdown
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 1 comment
Labels: enhancement, code cleanup
#648 - Expression page - Add ability to download expression data for just a gene or subset of genes
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement
#648 - Expression page - Add ability to download expression data for just a gene or subset of genes
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement
#647 - SC-Workbench - possibility of subclustering
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement
#647 - SC-Workbench - possibility of subclustering
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement
#646 - SC workbench - ability to download intermediate h5ad files
Issue -
State: open - Opened by adkinsrs 9 months ago
#646 - SC workbench - ability to download intermediate h5ad files
Issue -
State: open - Opened by adkinsrs 9 months ago
#645 - Index and expression page - highlight region if no dataset collection selected after searching
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 2 comments
#645 - Index and expression page - highlight region if no dataset collection selected after searching
Issue -
State: closed - Opened by adkinsrs 9 months ago
- 2 comments
#644 - Compare tool - add DESeq significance testing
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement, user request
#644 - Compare tool - add DESeq significance testing
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement, user request
#643 - Compare tool - add FDR correction for statistical tests
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement, user request
#643 - Compare tool - add FDR correction for statistical tests
Issue -
State: open - Opened by adkinsrs 9 months ago
Labels: enhancement, user request
#642 - Changing scoring method results in nonsensical values for svgs
Issue -
State: open - Opened by JPReceveur 9 months ago
- 3 comments
Labels: bug, Low Priority
#642 - Changing scoring method results in nonsensical values for svgs
Issue -
State: open - Opened by JPReceveur 9 months ago
- 3 comments
Labels: bug, Low Priority
#641 - gene expression search behavior for missing genes
Issue -
State: open - Opened by JPReceveur 9 months ago
Labels: bug, Low Priority
#641 - gene expression search behavior for missing genes
Issue -
State: open - Opened by JPReceveur 9 months ago
Labels: bug, Low Priority
#640 - Exact match behavior when using multigenes
Issue -
State: open - Opened by JPReceveur 9 months ago
Labels: enhancement, Low Priority
#640 - Exact match behavior when using multigenes
Issue -
State: open - Opened by JPReceveur 9 months ago
Labels: enhancement, Low Priority
#639 - Replace nice-select2 gene search dropdowns with simple autocomplete
Issue -
State: closed - Opened by adkinsrs 10 months ago
- 1 comment
Labels: enhancement
#639 - Replace nice-select2 gene search dropdowns with simple autocomplete
Issue -
State: closed - Opened by adkinsrs 10 months ago
- 1 comment
Labels: enhancement
#638 - Throw warning in dataset explorer when searching with too few characters
Issue -
State: open - Opened by JPReceveur 10 months ago
Labels: enhancement, Low Priority
#638 - Throw warning in dataset explorer when searching with too few characters
Issue -
State: open - Opened by JPReceveur 10 months ago
Labels: enhancement, Low Priority
#637 - Write test suites
Issue -
State: open - Opened by adkinsrs 11 months ago
Labels: documentation, code cleanup, needs testing
#636 - Gene Collection Manager - Improve Partial Name matching
Issue -
State: open - Opened by adkinsrs 11 months ago
Labels: bug, enhancement
#636 - Gene Collection Manager - Improve Partial Name matching
Issue -
State: open - Opened by adkinsrs 11 months ago
Labels: bug, enhancement
#635 - Refactor of Single Gene Curator
Issue -
State: closed - Opened by DanLesperance 11 months ago
- 4 comments
Labels: bug
#635 - Refactor of Single Gene Curator
Issue -
State: closed - Opened by DanLesperance 11 months ago
- 4 comments
Labels: bug
#634 - Visualizing marker genes return an error
Issue -
State: closed - Opened by beamilon 11 months ago
- 3 comments
#634 - Visualizing marker genes return an error
Issue -
State: closed - Opened by beamilon 11 months ago
- 3 comments
#633 - Some uploads failing due to character set
Issue -
State: closed - Opened by jorvis 11 months ago
- 3 comments
Labels: bug
#633 - Some uploads failing due to character set
Issue -
State: closed - Opened by jorvis 11 months ago
- 3 comments
Labels: bug
#632 - Setup devel server as a Github Actions self-hosted runner
Issue -
State: closed - Opened by adkinsrs 11 months ago
- 1 comment
Labels: enhancement, needs testing
#632 - Setup devel server as a Github Actions self-hosted runner
Issue -
State: closed - Opened by adkinsrs 11 months ago
- 1 comment
Labels: enhancement, needs testing
#631 - Dotplot on Multigene Displays Scrunching Dots Together after large amount of genes in display
Issue -
State: open - Opened by DanLesperance 12 months ago
- 1 comment
#630 - Adding the ability to make two equal sized datasets in one row of a profile
Issue -
State: open - Opened by JPReceveur 12 months ago
- 1 comment
Labels: enhancement
#630 - Adding the ability to make two equal sized datasets in one row of a profile
Issue -
State: open - Opened by JPReceveur 12 months ago
- 1 comment
Labels: enhancement
#629 - Test Plan
Issue -
State: open - Opened by RLC-DCPPC 12 months ago
- 3 comments
#629 - Test Plan
Issue -
State: open - Opened by RLC-DCPPC 12 months ago
- 3 comments
#628 - H5AD file read error shows up as "Resources are busy ..."
Issue -
State: open - Opened by jorvis 12 months ago
- 2 comments
Labels: bug
#628 - H5AD file read error shows up as "Resources are busy ..."
Issue -
State: open - Opened by jorvis 12 months ago
- 2 comments
Labels: bug
#627 - Issue with dataset
Issue -
State: open - Opened by gear-portal-team 12 months ago
- 2 comments
#627 - Issue with dataset
Issue -
State: open - Opened by gear-portal-team 12 months ago
- 2 comments
#625 - primary analysis - ScRNA-seq - P8, P12, P20 mouse cochlea (Michalski 2023)
Issue -
State: closed - Opened by gear-portal-team about 1 year ago
- 4 comments
#625 - primary analysis - ScRNA-seq - P8, P12, P20 mouse cochlea (Michalski 2023)
Issue -
State: closed - Opened by gear-portal-team about 1 year ago
- 4 comments
#624 - URGENT: gEAR website not loading at all
Issue -
State: closed - Opened by kmgwilliam about 1 year ago
- 1 comment
#624 - URGENT: gEAR website not loading at all
Issue -
State: closed - Opened by kmgwilliam about 1 year ago
- 1 comment