Hjorthmedh/Snudda issues and pull requests

#431 - Updated code for init_tiny

Pull Request - State: closed - Opened by Hjorthmedh 3 days ago - 1 comment

#430 - Updated Neuromodulation code, using RxD

Pull Request - State: closed - Opened by Hjorthmedh 4 days ago - 1 comment

#429 - Added minimal current injection example notebook

Pull Request - State: closed - Opened by Hjorthmedh 4 days ago

#428 - Neuromod redux2

Pull Request - State: closed - Opened by Hjorthmedh 24 days ago

#427 - RxD bath application, updated replace_axon

Pull Request - State: closed - Opened by Hjorthmedh about 1 month ago - 1 comment

#426 - Added MPI import before NEURON

Pull Request - State: closed - Opened by Hjorthmedh about 2 months ago

#425 - Neuromod redux2

Pull Request - State: closed - Opened by Hjorthmedh 2 months ago

#424 - Added gap junction current recording

Pull Request - State: closed - Opened by Hjorthmedh 2 months ago

#423 - Added recording for cortical input

Pull Request - State: closed - Opened by Hjorthmedh 2 months ago

#422 - Neuromod redux2

Pull Request - State: closed - Opened by Hjorthmedh 2 months ago

#421 - Neuromodulation is now implemented using RxD

Pull Request - State: closed - Opened by Hjorthmedh 2 months ago

#420 - Update input.py

Pull Request - State: closed - Opened by wstho 4 months ago

#419 - Wst

Pull Request - State: closed - Opened by wstho 4 months ago

#418 - Wst

Pull Request - State: closed - Opened by wstho 4 months ago

#417 - Update bend_morphologies.py

Pull Request - State: closed - Opened by wstho 5 months ago - 1 comment

#416 - Dev

Pull Request - State: closed - Opened by Hjorthmedh 6 months ago

#415 - Init redux2

Pull Request - State: closed - Opened by Hjorthmedh 6 months ago

#414 - Minor bug fixes

Pull Request - State: closed - Opened by Hjorthmedh 7 months ago

#413 - Fixed init bug

Pull Request - State: closed - Opened by Hjorthmedh 7 months ago

#412 - Fixed clustering bug

Pull Request - State: closed - Opened by Hjorthmedh 7 months ago

#411 - New config formats

Pull Request - State: closed - Opened by Hjorthmedh 7 months ago

#410 - Updated network-config.json

Pull Request - State: closed - Opened by Hjorthmedh 7 months ago - 1 comment

#409 - Init redux

Pull Request - State: closed - Opened by Hjorthmedh 8 months ago

#408 - Init redux

Pull Request - State: closed - Opened by Hjorthmedh 8 months ago - 2 comments

#407 - Init redux

Pull Request - State: closed - Opened by Hjorthmedh 8 months ago

#406 - Init redux

Pull Request - State: closed - Opened by Hjorthmedh 8 months ago

#405 - More flexible input generation from meta.json

Pull Request - State: closed - Opened by Hjorthmedh 8 months ago - 1 comment

#404 - Fixed unit test

Pull Request - State: closed - Opened by Hjorthmedh 9 months ago

#403 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 9 months ago

#402 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 9 months ago

#401 - Updated input.py

Pull Request - State: closed - Opened by Hjorthmedh 9 months ago

#400 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 9 months ago

#399 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 10 months ago

#398 - Dev

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#397 - Added parameters to config file

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#396 - Fixed soma

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#395 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#394 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#393 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 11 months ago

#392 - Region mesh redux

Pull Request - State: closed - Opened by Hjorthmedh 12 months ago - 1 comment

#391 - Dev

Pull Request - State: closed - Opened by Hjorthmedh about 1 year ago

#390 - Dev

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#389 - Update README.md with EBRAINS

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#388 - Dev

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago - 1 comment

#387 - Dev

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#386 - Update README.md

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#385 - Update README.md

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#384 - Dardel NEURON install

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#383 - nSomaSynapses for input

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#382 - Fix memory footprint

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#381 - Script update

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#380 - Memory footprint

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#379 - Added wheel for build

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#378 - Improving memory usage

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#377 - updated LTS model - gbar

Pull Request - State: closed - Opened by jofrony over 1 year ago

#376 - Sonata

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#375 - composite axons - bug fixes and optimization

Pull Request - State: closed - Opened by wthun over 1 year ago

#374 - Merging in opt

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#373 - Dev bgd add

Pull Request - State: closed - Opened by jofrony over 1 year ago - 1 comment

#372 - Dev bgd add

Pull Request - State: closed - Opened by jofrony over 1 year ago

#371 - Replaced mechanisms older with BasalGangliaData mechanisms folder - t…

Pull Request - State: closed - Opened by jofrony over 1 year ago

#370 - Dev

Pull Request - State: closed - Opened by jofrony over 1 year ago

#369 - Composite Axon Projection Format

Pull Request - State: closed - Opened by wthun over 1 year ago

#368 - Axon flexibility

Pull Request - State: closed - Opened by wthun over 1 year ago - 1 comment

#367 - Fixed axon_density

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#366 - Re-added missing axon clouds

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#365 - Re-added missing axon cloud detect

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#364 - Population unit 0 does not share mother spikes between neurons

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#363 - Axon flex2

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#362 - Updated how neuron morphologies are represented, updated save file formats

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago - 1 comment

#361 - Updated p_corr for inputs

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#360 - Updated

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#359 - Adding analyse_spike_trains

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#358 - Axon flex2

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#357 - Axon flex2

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago

#356 - Update README.md

Pull Request - State: closed - Opened by robban80 over 1 year ago

#355 - Restructured how neuron morphologies are stored

Pull Request - State: closed - Opened by Hjorthmedh over 1 year ago - 1 comment

#354 - Axon flexibility

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#353 - Dev

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#352 - Synaptic fitting2

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#351 - Dev

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#350 - Adding notebooks for EBRAINS

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#349 - Clearing

Pull Request - State: closed - Opened by IlaCar almost 2 years ago

#348 - Updated

Pull Request - State: closed - Opened by IlaCar almost 2 years ago

#347 - Reordering

Pull Request - State: closed - Opened by IlaCar almost 2 years ago

#346 - Updated del

Pull Request - State: closed - Opened by IlaCar almost 2 years ago

#345 - Synaptic fitting2

Pull Request - State: closed - Opened by IlaCar almost 2 years ago

#344 - Dev

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#343 - Synaptic fitting2

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#342 - Removed argparse from setup.py

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#341 - Removing argparse from setup.py

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#340 - Dev

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago - 1 comment

#339 - Synaptic fitting2

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#338 - 'Fatal error in PMPI_Init_thread' on HPC

Issue - State: closed - Opened by appukuttan-shailesh almost 2 years ago - 1 comment

#337 - Post degen pruning variable

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#336 - Removed file

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#335 - Synaptic fitting2

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago

#334 - Dev

Pull Request - State: closed - Opened by Hjorthmedh almost 2 years ago - 1 comment

#333 - To keep 'snudda_data' as optional parameter in snudda_parse_path()

Pull Request - State: closed - Opened by appukuttan-shailesh about 2 years ago - 2 comments

#332 - Return values for connection probability

Pull Request - State: closed - Opened by appukuttan-shailesh about 2 years ago

GitHub / Hjorthmedh/Snudda issues and pull requests