Gregor-Mendel-Institute/SNPmatch issues and pull requests

#20 - Update setup.py with hmmlearn

Pull Request - State: closed - Opened by ellisztamas 10 months ago

#19 - Link to database is incorrect

Issue - State: closed - Opened by JoseMMuino about 2 years ago - 1 comment

#18 - Error when providing data without PL

Issue - State: open - Opened by dovivi about 2 years ago

#17 - Incongruities at program results

Issue - State: open - Opened by dukelheit about 4 years ago - 3 comments
Labels: question

#16 - An error occurs while using recommended version of scikit-allel (0.20.3)

Issue - State: closed - Opened by dukelheit about 4 years ago - 1 comment

#15 - Problem with chr names are sorted by default in np.unique

Issue - State: closed - Opened by rbpisupati about 4 years ago

#14 - Generalize genotype_cross based on chromosome names in input

Issue - State: closed - Opened by rbpisupati over 5 years ago

#13 - Different results when input is shuffled

Issue - State: closed - Opened by davetang over 5 years ago - 5 comments

#12 - Parsing VCF files filters out non integer Chromosomes

Issue - State: closed - Opened by rbpisupati about 6 years ago

#11 - TypeError in JSON file output of genotyper inbred

Issue - State: closed - Opened by rbpisupati about 6 years ago

#10 - error when using snpmatch, throw error if bcftools doesnt exist in the path

Issue - State: closed - Opened by vinay104 about 6 years ago - 21 comments
Labels: enhancement

#9 - SNPmatch error

Issue - State: closed - Opened by wyim-pgl over 6 years ago - 1 comment

#8 - SNPmatch error

Issue - State: closed - Opened by wyim-pgl over 6 years ago - 4 comments

#7 - vcfnp package has been deprecated!

Issue - State: closed - Opened by rbpisupati about 7 years ago - 2 comments

#6 - Trouble creating SNP database files

Issue - State: closed - Opened by blthree over 7 years ago - 7 comments

#5 - Output not only overlap in percentage but also absolute value

Issue - State: closed - Opened by timeu almost 8 years ago

#4 - Add case and interpretation to parse genotype json