Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / Goosang-Yu/genet issues and pull requests

#95 - Numpy 2.0.0 compatibility

Issue - State: open - Opened by Goosang-Yu 8 months ago

#93 - Change pyproject.toml for MacOS

Pull Request - State: closed - Opened by Goosang-Yu 9 months ago

#92 - GenET v0.15.0 installation problom on Apple Silicon (M1 / M2)

Issue - State: closed - Opened by Goosang-Yu 10 months ago - 6 comments
Labels: bug

#91 - GenET v0.15.0 updates

Pull Request - State: closed - Opened by Goosang-Yu 10 months ago

#89 - DeepPrimeGuideRNA: input sequences in uppercase or lowercase changes the output!

Issue - State: closed - Opened by francoiskroll 10 months ago - 6 comments
Labels: bug

#88 - Different outputs webtool vs python package?

Issue - State: closed - Opened by francoiskroll 10 months ago - 2 comments

#87 - sync branch

Pull Request - State: closed - Opened by Goosang-Yu 10 months ago

#86 - Some comments about installation on macos M2 Pro

Issue - State: closed - Opened by francoiskroll 10 months ago - 3 comments

#85 - Enhancements to Genetic Analysis Functions

Pull Request - State: closed - Opened by ntfargo 10 months ago

#84 - Very long running time, what am I doing wrong?

Issue - State: closed - Opened by francoiskroll 10 months ago - 3 comments
Labels: help wanted

#83 - Option added: Install synonymous mutation in CDS

Pull Request - State: closed - Opened by Jinyeong-Yang 10 months ago

#82 - Dev jy

Pull Request - State: closed - Opened by Jinyeong-Yang 10 months ago

#81 - option added: install synonymous mutations within CDS

Pull Request - State: closed - Opened by Jinyeong-Yang 10 months ago

#80 - ORFs & Codon

Issue - State: closed - Opened by ntfargo 11 months ago
Labels: enhancement

#79 - Release v0.14.1

Pull Request - State: closed - Opened by Goosang-Yu 11 months ago

#78 - Changes

Pull Request - State: closed - Opened by ntfargo 11 months ago - 1 comment

#77 - 0.14.0

Pull Request - State: closed - Opened by ntfargo 11 months ago

#76 - Release v0.14.0

Pull Request - State: closed - Opened by Goosang-Yu 11 months ago

#75 - Sync branch

Pull Request - State: closed - Opened by Goosang-Yu 12 months ago

#74 - 📝 | Translate

Pull Request - State: closed - Opened by ntfargo 12 months ago

#73 - Update DeepPrimeGuideRNA and release 0.13.7

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#72 - bug fixed in stack function and run file deleted

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#71 - bug fixed_stack function

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#70 - bug fixed_stack function

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#69 - Sync main branch

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#68 - Release v0.13.6

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#67 - Sync main

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#66 - Bug fixed

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#65 - Bug fixed

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#64 - Sync documentation branch

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#63 - Sync from main branch

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#62 - Sync from YJY ver. SynonymousPE

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#61 - Sync from main branch

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#60 - Sync branch from main

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#59 - Update functional.py

Pull Request - State: closed - Opened by josephjinpark about 1 year ago

#58 - pecv_score, docs en.

Pull Request - State: closed - Opened by ntfargo about 1 year ago

#57 - GenET Models.

Issue - State: open - Opened by ntfargo about 1 year ago - 1 comment

#56 - Dev_goosang

Pull Request - State: closed - Opened by ntfargo about 1 year ago

#55 - priority changed

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago - 1 comment

#54 - Update README

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#53 - Update daocs and fix bugs in SynonymousPE.stack

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#52 - 🐛 SynonymousPE bug fixed!

Pull Request - State: closed - Opened by Jinyeong-Yang about 1 year ago

#51 - Dev goosang

Pull Request - State: closed - Opened by ntfargo about 1 year ago

#50 - Update documentations

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#49 - 🐛 SynonoyPE bug fixed

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#48 - Release v0.13.0

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#47 - Sync main branch

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#46 - Release v0.12.0

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#45 - Issue with prd.pe_score() and prd.DeepPrime()

Issue - State: closed - Opened by mathinic about 1 year ago - 4 comments
Labels: bug

#44 - Main changes to ntfargo-dev

Pull Request - State: closed - Opened by ntfargo about 1 year ago

#43 - Merge from main to dev_goosang

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#42 - Release GenET v0.11.0

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#41 - Release GenET v0.11.0

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#40 - Support python 3.11 and latest tensorflow

Issue - State: closed - Opened by Goosang-Yu about 1 year ago - 1 comment

#39 - 📝 update workflow config

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#38 - Make new documentations and publish

Pull Request - State: closed - Opened by Goosang-Yu about 1 year ago

#37 - Update constants.py

Pull Request - State: closed - Opened by josephjinpark about 1 year ago - 2 comments

#36 - Clean items and change release tools

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#35 - Testing the most recent versions of libraries

Issue - State: closed - Opened by ntfargo over 1 year ago - 2 comments
Labels: Pending

#34 - merge main to dev_goosang

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#33 - Make python function of ViennaRNA fold_compound

Issue - State: closed - Opened by Goosang-Yu over 1 year ago - 7 comments

#32 - Key function: MAGeCK test module

Issue - State: closed - Opened by Goosang-Yu over 1 year ago - 1 comment

#31 - Key function: MAGeCK count module

Issue - State: closed - Opened by Goosang-Yu over 1 year ago

#30 - Implement UMI-tools: ReadDeduplicator, fixed

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#29 - Implement UMI-tools: ReadDeduplicator

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago - 4 comments

#28 - analysis module: CountReadFromCRISPResso

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#27 - DeepPrime.py

Pull Request - State: closed - Opened by ntfargo over 1 year ago

#26 - Update DeepPrime.py

Pull Request - State: closed - Opened by josephjinpark over 1 year ago - 1 comment

#25 - Update to DeepPrime.py for large-scale runs

Pull Request - State: closed - Opened by josephjinpark over 1 year ago

#24 - Merge commit 'd3dfc472744ebb0329d3f9d240ca9c7e75afaac2' into develop

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#23 - Develop search method in SpCas9 class

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#22 - 🔖 Release v0.8.1

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#21 - ✅ Update output file format

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#20 - Release 0.7.0

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#19 - Change setup.py for OSX (MacOS)

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#18 - ✅ update LoadModel class

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#17 - Installation issue (Genet dependencies)

Issue - State: closed - Opened by julianeweller over 1 year ago - 6 comments

#16 - Release genet 0.6.0

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#15 - ✅ Release genet 0.6.0

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#14 - ⚡️ degisn.SynonymousPE: finalized

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#13 - 🐛 Debugging: genet.design.SynonymousPE

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#12 - 🐛 SynonymousPE: Debugging

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#11 - ✅ update setup and readme files

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#10 - ✅ update synonymousPE

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#9 - update functionas

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#8 - ✅ update Synonymous PAM editing design

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#7 - ✨ make synonymousPAM class

Pull Request - State: closed - Opened by Goosang-Yu over 1 year ago

#6 - Develop

Pull Request - State: closed - Opened by Goosang-Yu almost 2 years ago

#5 - Develop

Pull Request - State: closed - Opened by Goosang-Yu almost 2 years ago

#4 - 💡 Test comment added

Pull Request - State: closed - Opened by Goosang-Yu about 2 years ago

#3 - ⚰️ remove test code

Pull Request - State: closed - Opened by Goosang-Yu about 2 years ago

#2 - test def 만듬

Pull Request - State: closed - Opened by Goosang-Yu about 2 years ago

#1 - staging new code on test branch

Pull Request - State: closed - Opened by Goosang-Yu about 2 years ago - 1 comment