Ecosyste.ms: Issues

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GitHub / GlobalNamesArchitecture/gnparser issues and pull requests

#482 - Question. Can this identify scientific names (latin or greek words in scientific litrature)?

Issue - State: closed - Opened by federicosan almost 5 years ago - 1 comment
Labels: question

#481 - Submit new issues to https://gitlab.com/gogna/gnparser/issues

Issue - State: open - Opened by dimus over 5 years ago

#480 - Documentation for canonicalName

Issue - State: closed - Opened by JRice over 5 years ago - 2 comments

#479 - how do you differentiate author strings?

Issue - State: closed - Opened by sckott over 5 years ago - 16 comments

#478 - Fix #476: Handle comma before last author separator

Pull Request - State: closed - Opened by alexander-myltsev almost 6 years ago

#477 - Fix #472 add author prefix 'zur'

Pull Request - State: closed - Opened by dimus almost 6 years ago - 1 comment

#474 - Malformed author strings

Issue - State: closed - Opened by gdower almost 6 years ago - 9 comments
Labels: enhancement

#473 - As a User I want to use italic markup as a help with parsing

Issue - State: closed - Opened by dimus about 6 years ago - 1 comment

#472 - "Aeolothrips andalusiacus zur Strassen 1973" is not parsed correctly

Issue - State: closed - Opened by dimus about 6 years ago
Labels: bug

#471 - Limit the size of input stream for CLI

Issue - State: closed - Opened by alexander-myltsev about 6 years ago

#470 - Add logging of parsing time

Issue - State: closed - Opened by alexander-myltsev about 6 years ago

#468 - Parser breaks on "</i>Hipponicidae<i>_incertae_sedis</i>"

Issue - State: closed - Opened by dimus about 6 years ago - 2 comments

#467 - Update the README: format flags info

Pull Request - State: closed - Opened by alexander-myltsev about 6 years ago

#466 - `file` command options are not passed to default launch

Issue - State: closed - Opened by alexander-myltsev about 6 years ago
Labels: bug

#465 - Introduce `json_pretty` format flag

Issue - State: closed - Opened by alexander-myltsev about 6 years ago

#464 - Check if webserver and tcpserver returns valid JSON

Issue - State: closed - Opened by alexander-myltsev over 6 years ago

#463 - Fix the bug with positioning

Issue - State: closed - Opened by alexander-myltsev over 6 years ago

#461 - 460 remove tags

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#459 - Fix #458: handle miscoded chars within entire name

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago - 1 comment

#458 - Correctly parse `Fusinus eucos�nius`

Issue - State: closed - Opened by alexander-myltsev over 6 years ago

#457 - Fix #455: Handle `of` correctly

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#456 - "Pereskia subg. Maihuenia Philippi ex F.A.C.Weber, 1898" should be parsed with subg. rank

Issue - State: closed - Opened by dimus over 6 years ago - 1 comment
Labels: bug

#454 - Fix #453: Respect word border after `Not`

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#452 - Several names that are not parsed correctly

Issue - State: closed - Opened by dimus over 6 years ago - 1 comment

#451 - 450 release-0.4.4

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#450 - Release 0.4.4

Issue - State: closed - Opened by alexander-myltsev over 6 years ago - 1 comment
Labels: in progress

#449 - Fix #434: Support "emend." and "emend"

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago - 2 comments

#448 - Fix #432: fix author parsing

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago - 1 comment

#447 - Fix #429: `ex` should not be handled as (infra)species

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago - 1 comment

#446 - Fix #430: parse `nvar.` rank

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#445 - 436 support apud

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#444 - Fix #433: revert punctuation handling

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#443 - Fix #437: normalise filius to `fil.`

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#442 - Fix #431: parse "del" as part of authorship

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#441 - Fix #435: parse "& al." as a variant of "et al."

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago - 1 comment

#440 - Fix #428: correctly parse `nomenyae`

Pull Request - State: closed - Opened by alexander-myltsev over 6 years ago

#439 - Problem with embedded double quote

Issue - State: closed - Opened by Mesibov over 6 years ago - 1 comment

#438 - Header on "file" output

Issue - State: closed - Opened by Mesibov over 6 years ago - 2 comments

#436 - Parse "apud" ("with") as a possible delimiter between authors

Issue - State: closed - Opened by dimus over 6 years ago - 2 comments

#435 - Parse "& al." as a variant of "et al."

Issue - State: closed - Opened by dimus over 6 years ago

#434 - Support "emend." and "emend"

Issue - State: closed - Opened by dimus over 6 years ago - 2 comments

#431 - parse "del" as part of authorship

Issue - State: closed - Opened by dimus over 6 years ago

#430 - Parse "nvar." rank

Issue - State: closed - Opened by dimus over 6 years ago - 2 comments

#428 - "Impatiens nomenyae Eb.Fisch. & Raheliv." is not parsed

Issue - State: closed - Opened by dimus over 6 years ago

#427 - Fix #401: add more ranks and two-letter abbreviations

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago

#426 - Clean up comparison in Preprocessing

Issue - State: closed - Opened by alexander-myltsev almost 7 years ago

#425 - 400 species with dot

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago - 2 comments

#424 - Fix #415: don’t parse `spec.` and `nov spec`

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago

#423 - Fix #408: fix virus pattern

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago

#422 - Fix #405: handle `ht`

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago - 1 comment

#421 - Fix #399: fix handling numbers in beginning of word

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago

#420 - Fix #399: fix handling numbers in names

Pull Request - State: closed - Opened by alexander-myltsev almost 7 years ago

#415 - Names that have "spec." should not parse 'spec.' as species

Issue - State: closed - Opened by dimus almost 7 years ago

#413 - natio rank parsed as epithet

Issue - State: closed - Opened by mdoering almost 7 years ago - 1 comment
Labels: bug

#411 - Named hybrid wrongly parsed

Issue - State: closed - Opened by mdoering almost 7 years ago - 2 comments
Labels: bug

#410 - Nothotaxa not parsed as ranks

Issue - State: closed - Opened by mdoering almost 7 years ago - 1 comment
Labels: bug

#409 - Sanctioning authors not parsed

Issue - State: closed - Opened by mdoering almost 7 years ago - 1 comment
Labels: enhancement

#408 - Names like "Arv1virus" are broken into "Arv" and "1virus"

Issue - State: closed - Opened by dimus almost 7 years ago - 1 comment
Labels: bug

#407 - convert underscores to spaces only if there are no spaces in a name

Issue - State: closed - Opened by dimus almost 7 years ago - 1 comment

#405 - Ignore `ht`

Issue - State: closed - Opened by dimus almost 7 years ago

#401 - As a User I want parser to work with 'ex', 'ab.', 'ab. n.', 'cv', 'st'

Issue - State: closed - Opened by dimus almost 7 years ago - 2 comments

#400 - species epithets with a "dot" should not parse

Issue - State: closed - Opened by dimus almost 7 years ago - 1 comment
Labels: bug

#399 - number part of names like "Nesomyrmex madecassus_01m" should not parse

Issue - State: closed - Opened by dimus almost 7 years ago
Labels: bug

#398 - Transliteration of umlauts needed

Issue - State: closed - Opened by mdoering almost 7 years ago - 4 comments

#387 - Decide what to do with names where species epithet has multiple dashes

Issue - State: closed - Opened by dimus about 7 years ago - 1 comment

#383 - Parse "Leptodactylus gr. wagneri" correctly

Issue - State: closed - Opened by dimus about 7 years ago - 1 comment

#381 - Extend test coverage

Issue - State: closed - Opened by alexander-myltsev about 7 years ago - 1 comment

#378 - capitalized epithets

Issue - State: closed - Opened by diatomsRcool about 7 years ago - 3 comments
Labels: wontfix

#377 - numbers in specific epithet

Issue - State: closed - Opened by diatomsRcool about 7 years ago - 2 comments

#376 - authorities confused as subgenera

Issue - State: closed - Opened by diatomsRcool about 7 years ago - 2 comments

#375 - Figure out what to do with showing help

Issue - State: closed - Opened by alexander-myltsev about 7 years ago - 1 comment

#374 - Resolve dash clashes

Issue - State: closed - Opened by alexander-myltsev over 7 years ago

#372 - Test gnparser bash launcher in CircleCI

Issue - State: closed - Opened by alexander-myltsev over 7 years ago

#368 - Abandon machine workflow from CircleCI build

Issue - State: closed - Opened by alexander-myltsev over 7 years ago

#366 - Cover genera with dashes

Issue - State: closed - Opened by dimus over 7 years ago - 3 comments

#363 - dela as specific epithet

Issue - State: closed - Opened by diatomsRcool over 7 years ago - 10 comments

#331 - Figure out what to do with "le"

Issue - State: closed - Opened by dimus over 7 years ago - 2 comments

#319 - Migrate to Scala 2.12

Issue - State: closed - Opened by alexander-myltsev almost 8 years ago - 2 comments

#306 - Unescape translators

Issue - State: closed - Opened by alexander-myltsev about 8 years ago - 1 comment

#242 - Handle lowcap subgeneric names

Issue - State: closed - Opened by dimus almost 9 years ago - 1 comment

#238 - Add comma before year

Issue - State: closed - Opened by dimus almost 9 years ago

#228 - Add debug flag to parboiled2's `capturePos`

Issue - State: closed - Opened by alexander-myltsev almost 9 years ago

#191 - Add annotation ignore to positions

Issue - State: closed - Opened by alexander-myltsev almost 9 years ago - 1 comment

#185 - Extract warning messages strings to resources

Issue - State: closed - Opened by alexander-myltsev almost 9 years ago

#158 - Add `rank: genus` to uninomial and infraspecies

Issue - State: closed - Opened by alexander-myltsev almost 9 years ago - 2 comments

#118 - Move names ending with infraspecific rank to AST

Issue - State: closed - Opened by dimus almost 9 years ago