GMOD/jbconnect issues and pull requests

#189 - Bump jsdom from 9.12.0 to 16.5.0

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#188 - Bump grunt from 1.0.3 to 1.5.3

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#187 - Bump grunt from 1.0.3 to 1.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#186 - Bump async from 2.6.3 to 3.2.2

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#185 - Bump node-fetch from 2.6.0 to 3.1.1

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#184 - Bump shelljs from 0.7.8 to 0.8.5

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#183 - Bump validator from 6.3.0 to 13.7.0

Pull Request - State: open - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#182 - Bump grunt from 1.0.3 to 1.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#181 - Bump merge from 1.2.1 to 2.1.1

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#180 - Bump redis from 2.8.0 to 3.1.1

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#179 - Sails error

Issue - State: open - Opened by kostasgalexiou over 3 years ago

#178 - Ability to upload data and tracks and create new datasets.

Issue - State: open - Opened by enuggetry over 4 years ago

#177 - /track/get_tracklist is getting cached. Needs to have a timestamp mechanism.

Issue - State: open - Opened by enuggetry over 4 years ago
Labels: enhancement

#176 - auto inject bpSizeLimit into datasets upon launch

Issue - State: closed - Opened by enuggetry over 4 years ago

#175 - move bpSizeLimit= config from JBAnalyze plugin config to trackList.json config

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#174 - put all dataset configuration into the database

Issue - State: closed - Opened by enuggetry over 4 years ago

#173 - 404 error on demo

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#172 - update docs

Issue - State: closed - Opened by enuggetry over 4 years ago

#171 - Fix unit test verify boostrap Track.Sync

Issue - State: closed - Opened by enuggetry over 4 years ago

#170 - primer3 fails after democleanup

Issue - State: open - Opened by enuggetry over 4 years ago
Labels: bug

#169 - /democleanup qualify user and dataset

Issue - State: closed - Opened by enuggetry over 4 years ago

#168 - update docs

Pull Request - State: closed - Opened by enuggetry over 4 years ago

#167 - updates

Pull Request - State: closed - Opened by enuggetry over 4 years ago

#166 - move sample and primer3 into their own hook projects

Issue - State: closed - Opened by enuggetry over 4 years ago

#165 - user access control

Pull Request - State: closed - Opened by enuggetry over 4 years ago

#164 - simplify track/dataset reading

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#163 - remove obsolete serverSearchService

Issue - State: closed - Opened by enuggetry over 4 years ago

#162 - add user access controls

Issue - State: closed - Opened by enuggetry over 4 years ago

#161 - write tutorial for entire workflow development

Issue - State: closed - Opened by enuggetry over 4 years ago

#160 - rename job services

Issue - State: closed - Opened by enuggetry over 4 years ago

#159 - P3 changes

Pull Request - State: closed - Opened by enuggetry over 4 years ago

#158 - make insensitive to plugin order

Issue - State: open - Opened by enuggetry over 4 years ago

#157 - getWorkflows() called when not logged in

Issue - State: open - Opened by enuggetry over 4 years ago

#156 - fix Analyze menu not appearing

Issue - State: closed - Opened by enuggetry over 4 years ago

#155 - eliminate jbrowse patch

Issue - State: open - Opened by enuggetry over 4 years ago - 1 comment

#154 - filter track list of REST accessed tracks

Issue - State: closed - Opened by enuggetry over 4 years ago

#153 - update docs reflecting recent changes

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#152 - add primer3 install to travis

Issue - State: closed - Opened by enuggetry over 4 years ago

#151 - Submitted popup > Show "Primer3 submitted..."

Issue - State: closed - Opened by enuggetry over 4 years ago

#150 - primer3 results show when logged out

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#149 - fix undefined in primer3 track label

Issue - State: closed - Opened by enuggetry over 4 years ago

#148 - plugins check for login in constructor

Issue - State: open - Opened by enuggetry over 4 years ago

#147 - demo login for volvox dataset

Issue - State: closed - Opened by enuggetry over 4 years ago

#146 - filter workflows per dataset and blast database.

Issue - State: closed - Opened by enuggetry over 4 years ago

#145 - Primer3 menu option not appearing

Issue - State: closed - Opened by enuggetry over 4 years ago

#144 - demo reset not removing primer3 demo tracks.

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#143 - BLAST DNA sequence crashes when not FASTA format

Issue - State: open - Opened by enuggetry over 4 years ago

#142 - create Primer3 button on toolbar

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#141 - menu option to reset demo data

Issue - State: closed - Opened by enuggetry over 4 years ago

#140 - Fix primer3 dialog title

Issue - State: closed - Opened by enuggetry over 4 years ago

#139 - primer3 referencing wrong directory on wheat

Issue - State: closed - Opened by enuggetry over 4 years ago

#138 - installed hook job services not loading

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#137 - blast selected region picking up wrong workflow group

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#136 - Blast DNA Sequence picking up wrong workflow group

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#135 - remove Clear Demo Data from analyze menu

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#134 - grunt heap errors

Issue - State: closed - Opened by enuggetry over 4 years ago - 2 comments

#133 - dialog hide workflow selection if only one workflow.

Issue - State: closed - Opened by enuggetry over 4 years ago

#132 - primer3 tests

Issue - State: closed - Opened by enuggetry over 4 years ago

#131 - Cannot read property 'path' of undefined

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#130 - Hide Analyze menu when not logged in

Issue - State: closed - Opened by enuggetry over 4 years ago

#129 - Highlight "optimal solution" from Primer3 results with color or styling

Issue - State: closed - Opened by enuggetry over 4 years ago - 3 comments

#128 - Primer3 - Fix math for rendered features

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#127 - primer3 input fields

Issue - State: closed - Opened by enuggetry over 4 years ago - 3 comments

#126 - Change text

Issue - State: closed - Opened by enuggetry over 4 years ago - 2 comments

#125 - Populate Analyze menu directly with workflows

Issue - State: closed - Opened by enuggetry over 4 years ago - 1 comment

#124 - Sails memory leak

Issue - State: closed - Opened by enuggetry over 4 years ago - 2 comments

#123 - Coexistence with JBlast as separate plugin

Issue - State: closed - Opened by enuggetry over 4 years ago

#122 - More of Primer3 results in feature detail pane

Issue - State: closed - Opened by enuggetry over 4 years ago - 4 comments

#121 - restrict access to generated tracks per user

Issue - State: closed - Opened by enuggetry almost 5 years ago - 1 comment
Labels: enhancement

#120 - Review Stand-Alone Workflow interface

Issue - State: open - Opened by enuggetry about 5 years ago

#119 - Dependency Package Audit

Issue - State: open - Opened by enuggetry about 5 years ago - 1 comment

#118 - move the GUI interface for sequence selection over to JBConnect

Issue - State: open - Opened by enuggetry about 5 years ago

#117 - Update base sails framework to 1.0

Issue - State: open - Opened by enuggetry about 5 years ago
Labels: enhancement

#116 - Upgrade to JBrowse 1.16.6

Issue - State: open - Opened by enuggetry about 5 years ago
Labels: enhancement

#115 - Merge bot generated PRs

Issue - State: open - Opened by enuggetry about 5 years ago

#114 - Bump handlebars from 4.0.11 to 4.3.3

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#113 - Bump merge from 1.2.0 to 1.2.1

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#112 - Bump lodash from 4.17.10 to 4.17.13

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago - 1 comment
Labels: dependencies

#111 - Bump lodash.mergewith from 4.6.1 to 4.6.2

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago
Labels: dependencies

#109 - Bump handlebars from 4.0.11 to 4.1.2

Pull Request - State: closed - Opened by dependabot[bot] over 5 years ago - 1 comment
Labels: dependencies

#108 - Bump jquery from 3.3.1 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 5 years ago
Labels: dependencies

#106 - Bump bootstrap from 3.3.7 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 5 years ago
Labels: dependencies

#101 - track sync error with multi datasets

Issue - State: open - Opened by enuggetry over 5 years ago
Labels: bug

#89 - Track.Remove not updating in JBrowse

Issue - State: closed - Opened by enuggetry over 5 years ago - 1 comment
Labels: bug

#83 - Tab-active image not initializing to active after page reload.

Issue - State: open - Opened by enuggetry over 5 years ago - 2 comments
Labels: bug, enhancement

#78 - needs UI method to delete queue entries

Issue - State: open - Opened by enuggetry over 5 years ago
Labels: enhancement

#77 - Update dependencies to enable Greenkeeper 🌴

Pull Request - State: closed - Opened by greenkeeper[bot] over 5 years ago - 1 comment
Labels: greenkeeper

#76 - fix multi-dataset handling.

Issue - State: closed - Opened by enuggetry almost 6 years ago - 3 comments
Labels: bug, in progress

#70 - serversearch is failing due to webpack

Issue - State: closed - Opened by enuggetry over 6 years ago - 2 comments
Labels: bug, wontfix

#69 - verify alternate contig search

Issue - State: closed - Opened by enuggetry over 6 years ago - 2 comments
Labels: bug

#59 - adopt sails-auth-new module

Issue - State: open - Opened by enuggetry over 6 years ago - 1 comment
Labels: enhancement

#57 - Full client-side track management plugin

Issue - State: open - Opened by enuggetry over 6 years ago
Labels: wishlist

#56 - update documentation

Issue - State: closed - Opened by enuggetry over 6 years ago
Labels: enhancement, in progress

#54 - support .conf track configurations

Issue - State: closed - Opened by enuggetry over 6 years ago - 1 comment
Labels: enhancement

#53 - make JBserver hook to support JBrowse REST API

Issue - State: open - Opened by enuggetry over 6 years ago
Labels: wishlist

#52 - server regex search should determine refseq range

Issue - State: closed - Opened by enuggetry over 6 years ago - 1 comment
Labels: enhancement, high

#51 - Implement NCBI remote blast

Issue - State: open - Opened by enuggetry over 6 years ago
Labels: wishlist

#34 - Add support for Sails 1.0

Issue - State: closed - Opened by enuggetry almost 7 years ago - 1 comment
Labels: enhancement

#11 - Fix Bootstrap AMD loading issue

Issue - State: closed - Opened by enuggetry over 7 years ago - 2 comments
Labels: enhancement

#4 - abnormal termination kue handling

Issue - State: closed - Opened by enuggetry almost 8 years ago - 1 comment
Labels: enhancement

GitHub / GMOD/jbconnect issues and pull requests