Ecosyste.ms: Issues

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GitHub / GINsim/GINsim-python issues and pull requests

#21 - Fix conversion to pyboolnet primes

Pull Request - State: closed - Opened by vincent-noel 5 months ago - 1 comment

#20 - no longer works with openjdk 17

Issue - State: open - Opened by pauleve almost 2 years ago - 1 comment

#19 - BioLQM models should have an associated initial state

Issue - State: open - Opened by jonrkarr over 3 years ago - 2 comments

#18 - Can initial level of nodes be retrieved and set programmatically?

Issue - State: closed - Opened by jonrkarr over 3 years ago - 1 comment

#16 - Make the return type of `biolqm.convert_trace` consistent

Issue - State: open - Opened by jonrkarr over 3 years ago - 2 comments

#15 - Suggestion: Separate GINsim and biolqm conda/PyPI packages

Issue - State: open - Opened by jonrkarr over 3 years ago - 2 comments

#14 - Document requirement for JRE

Issue - State: open - Opened by jonrkarr over 3 years ago - 2 comments

#13 - Support reading SBML files with `.xml` extension

Issue - State: open - Opened by jonrkarr over 3 years ago - 4 comments

#12 - Provide method to get the versions of GINsim, GINsim-python, biolqm

Issue - State: open - Opened by jonrkarr over 3 years ago - 1 comment

#10 - How can errors in model loading be retrieved?

Issue - State: open - Opened by jonrkarr over 3 years ago - 1 comment

#9 - Decouple core functionality from use with Jupyter notebooks

Issue - State: open - Opened by jonrkarr over 3 years ago - 2 comments

#7 - `ginsim_setup.py` isn't bundled with the PyPI distribution

Issue - State: closed - Opened by jonrkarr over 3 years ago - 1 comment

#6 - `ginsim.to_nusmv` fails with models with input nodes and initial state

Issue - State: closed - Opened by pauleve over 4 years ago - 4 comments
Labels: bug

#5 - Automatic layout for regulatory graphs (was: Converted bioLQM model graph image is clipped)

Issue - State: closed - Opened by stairs about 5 years ago - 12 comments
Labels: enhancement

#4 - Adding services access

Pull Request - State: closed - Opened by vincent-noel about 6 years ago - 1 comment

#3 - Added function to get network image as png

Pull Request - State: closed - Opened by vincent-noel about 6 years ago

#2 - biolqm: Invalid fixpoint returned

Issue - State: closed - Opened by pauleve about 7 years ago - 2 comments
Labels: bug

#1 - Menu for model exportation and manipulation

Issue - State: closed - Opened by pauleve about 7 years ago
Labels: enhancement