Future-House/paper-qa issues and pull requests

#583 - Lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] 28 days ago
Labels: size:XS

#582 - paperqa.Settings does not use local llm

Issue - State: open - Opened by loilisxka 28 days ago - 27 comments
Labels: bug

#580 - Reading markdown files?

Issue - State: open - Opened by aginiewicz 29 days ago - 1 comment
Labels: question

#579 - Confirming LitQA sources are in a manifest/index

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#578 - Fixed `GLOBAL_RATE_LIMITER_TIMEOUT` env var typo

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:XS, lgtm

#577 - Fixing the ability to resume index builds

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#576 - System prompt formatting

Issue - State: open - Opened by whitead about 1 month ago
Labels: bug

#575 - Fixing `Settings` propagation and always configuring LiteLLM retrying

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#574 - `router_cooldown_event_callback but _deployment is None for deployment_id=...` error

Issue - State: open - Opened by Litreviewing about 1 month ago - 2 comments
Labels: bug

#573 - Increasing answer length

Issue - State: open - Opened by Litreviewing about 1 month ago - 9 comments
Labels: question

#572 - Increasing token count

Issue - State: open - Opened by Litreviewing about 1 month ago - 1 comment
Labels: question

#571 - Increasing token limit in CLI

Issue - State: open - Opened by Litreviewing about 1 month ago - 1 comment
Labels: question

#570 - Adding missing metadata without semantic scholar and crossref API keys

Issue - State: open - Opened by Litreviewing about 1 month ago - 1 comment
Labels: question

#569 - manually adding metadata

Issue - State: open - Opened by Litreviewing about 1 month ago - 1 comment
Labels: question

#568 - `litellm_get_search_query` does not use a local llm config

Issue - State: closed - Opened by migalkin about 1 month ago - 3 comments
Labels: bug

#567 - LiteLLM with HuggingFace and PaperQA

Issue - State: open - Opened by diazr04 about 1 month ago - 1 comment
Labels: question

#566 - Downloading `Package` artifact for `pypa/gh-action-pypi-publish`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:XS, lgtm

#565 - Propagating `hynek/build-and-inspect-python-package`'s output location to `pypa/gh-action-pypi-publish`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, enhancement, size:XS, lgtm

#564 - Moving to `setup-uv` and `hynek/build-and-inspect-python-package` in CI

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#563 - Ability to bypass usage of `litellm.Router`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago - 1 comment
Labels: enhancement, size:L, lgtm

#562 - ValueError when setting 'k' in AnswerSettings

Issue - State: open - Opened by ialzyoud about 1 month ago - 1 comment
Labels: bug

#561 - Refactoring `LiteLLMModel` before removing `Router`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#560 - Fixed pickle-ability of `LiteLLMModel`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:L, lgtm

#559 - Models supported by LiteLLM

Issue - State: closed - Opened by irenemadejski about 1 month ago - 3 comments
Labels: bug

#558 - Setting up a local embedding model served by a llamafile.

Issue - State: open - Opened by Snikch63200 about 1 month ago - 8 comments
Labels: question

#557 - Low relevance for Doc().query answer

Issue - State: open - Opened by Snikch63200 about 1 month ago - 6 comments

#555 - Adds openalex client as a default client

Pull Request - State: closed - Opened by nadolskit about 1 month ago - 2 comments
Labels: enhancement, size:L, lgtm

#554 - Cleaned up log verbosity code

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#553 - Allowed `None` log verbosity

Pull Request - State: closed - Opened by jamesbraza about 1 month ago - 1 comment
Labels: enhancement, size:M

#552 - Exposed log verbosity configuration function

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#551 - Making parsing resistant to failed inference of citations

Pull Request - State: closed - Opened by whitead about 1 month ago
Labels: bug, size:S, lgtm

#550 - Expose more information to the agent about the status of search results

Issue - State: open - Opened by mskarlin about 1 month ago
Labels: enhancement

#549 - DIfference between 'ask' function and 'doc.query' ?

Issue - State: open - Opened by Snikch63200 about 1 month ago - 2 comments
Labels: question

#548 - Document is not recognized as text document : disable document check

Issue - State: open - Opened by Snikch63200 about 1 month ago - 4 comments
Labels: bug, question

#547 - CROSSREF environment varibles not set

Issue - State: closed - Opened by Snikch63200 about 1 month ago - 2 comments
Labels: bug

#546 - JSON decode error when adding docs

Issue - State: closed - Opened by Snikch63200 about 1 month ago - 6 comments
Labels: bug

#545 - Lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago
Labels: size:XS

#544 - Validating for broken index

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:S, lgtm

#542 - OPENAI_API_BASE and OPENAI_API_KEY are not used

Issue - State: closed - Opened by thiner about 1 month ago - 1 comment
Labels: documentation

#541 - Example using locally-hosted model is not working

Issue - State: open - Opened by nleguillarme about 1 month ago - 7 comments
Labels: bug

#540 - Fixed yet another `api.semanticscholar.org:443 ssl:default` error via retrying

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#539 - Lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago
Labels: size:XS

#538 - Controlling for `pymupdf` version in `test_pdf_reader_match_doc_details` VCR

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:S, lgtm

#537 - Add limits+coredis to mypy

Pull Request - State: closed - Opened by mskarlin about 1 month ago
Labels: enhancement, size:M, lgtm

#536 - Added example how to use ollama hosted models

Pull Request - State: closed - Opened by grg-ffb about 1 month ago - 2 comments
Labels: documentation, size:M

#535 - Adding retrying of `aembedding` if it fails

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#534 - Lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago - 1 comment
Labels: size:XS

#533 - Propagating `AgentSettings.agent_type` default for synchrony

Pull Request - State: closed - Opened by jamesbraza about 1 month ago - 2 comments
Labels: enhancement, size:XS, lgtm

#532 - Add router_kwargs in separate control flow step

Pull Request - State: closed - Opened by mskarlin about 1 month ago
Labels: enhancement, size:S, lgtm

#531 - Disallowing confusing `None` from `IndexSettings.index_directory`, and `IndexSettings.get_named_index_directory`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#530 - Crossref title searches are non-deterministic

Issue - State: open - Opened by mskarlin about 1 month ago
Labels: bug

#529 - Retrying on `aiohttp.ClientConnectionResetError`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, documentation, size:S, lgtm

#528 - rubber aggregate

Issue - State: closed - Opened by Marouanbaj about 1 month ago

#527 - Documentation for changing the answer language ?

Issue - State: open - Opened by Snikch63200 about 1 month ago - 7 comments
Labels: question

#526 - Made it possible to skip chunking

Pull Request - State: closed - Opened by whitead about 1 month ago
Labels: enhancement, size:L, lgtm

#525 - Unit test that all configurations in `paperqa/configs/` don't repeat defaults

Issue - State: open - Opened by jamesbraza about 1 month ago
Labels: enhancement, good first issue

#524 - Better descriptions and log messages

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:XS, lgtm

#523 - Converted `PyMuPDF` message to warning logs

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:S, lgtm

#522 - Retrying on known Semantic Scholar flaky SSL error in `get_s2_doc_details_from_doi`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#521 - `rich.Progress` bar for monitoring index builds

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#520 - Add rate limits for LLMs and Embedding Models

Pull Request - State: closed - Opened by mskarlin about 1 month ago - 3 comments
Labels: enhancement, size:XXL, lgtm

#519 - Moving `run_ldp_agent` to center on `RolloutManager`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#518 - Fixing `IndexSettings.use_absolute_paper_directory` leading to relative index file paths

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:L, lgtm

#517 - Moved `reset_log_levels` to `usefixtures`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#516 - Decomposing `Answer.could_not_answer`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#515 - Aviary agent `max_timesteps` and fixed `test_gather_evidence_rejects_empty_docs`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, enhancement, size:M, lgtm

#514 - Updated citation to arxiv preprint

Pull Request - State: closed - Opened by whitead about 1 month ago - 1 comment
Labels: documentation, size:XS, lgtm

#513 - Removed extra `save_index` calls, and added missing `changed`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#512 - Not rebuilding `SearchIndex` every `paper_search`

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:M, lgtm

#511 - Cannot use "mixtral-8x7b-instruct-v0.1.Q4_K_M" as local LLM

Issue - State: open - Opened by Snikch63200 about 1 month ago - 1 comment
Labels: bug

#510 - Refactor to create `settings.agent.index` grouping

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:L, lgtm

#509 - Filtering two more `DeprecationWarning`s

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:XS, lgtm

#508 - Is there a way to use a local embedding model?

Issue - State: open - Opened by firdausai about 1 month ago - 3 comments
Labels: documentation

#507 - settings are correctly finding the locally running model, but docs gives err authentication error

Issue - State: open - Opened by hweiske about 1 month ago - 2 comments
Labels: bug

#506 - chore(deps): lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago
Labels: size:XS

#505 - chore(deps): update all non-major dependencies

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago - 1 comment
Labels: size:XS

#504 - chore(deps): lock file maintenance

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago
Labels: size:XS

#503 - Cleaning up #489's implementation

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#502 - How to skip the semantic and corssfy api Request

Issue - State: open - Opened by MrAlishr about 1 month ago - 4 comments
Labels: question

#501 - For autogenerated `Router` kwargs, specifying `timeout` of 60-sec

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:XS, lgtm

#500 - Fixing `LitQATaskDatasetcompute_trajectory_metrics` crash with bad status extraction

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:S, lgtm

#499 - Log `This may take a few minutes` less

Issue - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement

#498 - chore(deps): update all non-major dependencies

Pull Request - State: closed - Opened by renovate[bot] about 1 month ago
Labels: size:XS

#497 - Broken reader ut

Pull Request - State: closed - Opened by nadolskit about 1 month ago
Labels: bug, size:S, lgtm

#496 - the project cannot be started

Issue - State: open - Opened by RudRho about 1 month ago - 1 comment
Labels: documentation

#495 - Feature request: opt-in for `MetadataProvider` failovers

Issue - State: open - Opened by jamesbraza about 1 month ago - 2 comments
Labels: enhancement

#494 - Fixing `LitQATaskDataset` deserialization from config

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: bug, size:M, lgtm

#493 - Discovered Renovate `:automergeMinor` and preventing `openai` version bumps

Pull Request - State: closed - Opened by jamesbraza about 1 month ago
Labels: enhancement, size:S, lgtm

#492 - Could you kindly consider unifying the writing styles for the usage of settings?

Issue - State: open - Opened by fiyen about 2 months ago - 3 comments
Labels: enhancement

#491 - Allowing `parse_text` to be given a `str` path

Pull Request - State: closed - Opened by jamesbraza about 2 months ago
Labels: enhancement, size:XS, lgtm

#490 - path.open AttributeError：str object has no attribute 'open'

Issue - State: closed - Opened by fiyen about 2 months ago - 3 comments
Labels: bug

#489 - Refactor to expose `agents.RichHandler`

Pull Request - State: closed - Opened by jamesbraza about 2 months ago
Labels: enhancement, size:L, lgtm

#488 - Refactor to split up `get_directory_index` so every `paper_search` doesn't have to re-index

Issue - State: closed - Opened by jamesbraza about 2 months ago
Labels: enhancement

#487 - Modernizing Renovate config

Pull Request - State: closed - Opened by jamesbraza about 2 months ago
Labels: enhancement, size:S, lgtm

#486 - Support `PaperSearch` working with named indexes

Issue - State: closed - Opened by jamesbraza about 2 months ago - 1 comment
Labels: enhancement

#485 - Progress bar for indexing

Pull Request - State: closed - Opened by jamesbraza about 2 months ago - 1 comment
Labels: enhancement, size:L, lgtm

#484 - Bug: supporting `~` in `--paper_directory` in CLI

Issue - State: closed - Opened by jamesbraza about 2 months ago
Labels: bug

#483 - Cleaning up and testing `get_directory_index`

Pull Request - State: closed - Opened by jamesbraza about 2 months ago
Labels: enhancement, size:L, lgtm

#482 - Fixing `tests/tests/cassettes` issue by using absolute path

Pull Request - State: closed - Opened by jamesbraza about 2 months ago
Labels: bug, size:XS, lgtm

#481 - LLM

Issue - State: open - Opened by FahaxikiHoney about 2 months ago - 1 comment
Labels: bug

GitHub / Future-House/paper-qa issues and pull requests