FRBCesab/funbiogeo issues and pull requests

#103 - Submit to rOpenSci ✨

Issue - State: open - Opened by Rekyt 10 months ago

#102 - Add website to DESCRIPTION

Pull Request - State: closed - Opened by olivroy 10 months ago - 1 comment

#101 - Contribution guidelines

Pull Request - State: closed - Opened by ahasverus 10 months ago - 1 comment

#100 - Upgrade bootstrap version

Pull Request - State: closed - Opened by ahasverus 10 months ago - 1 comment

#99 - Provide example data for which we have the rights

Issue - State: open - Opened by Rekyt 10 months ago
Labels: enhancement

#98 - Provide example data with sites of different spatial shapes : (ir)regular polygons, lines, pixels, points

Issue - State: open - Opened by Rekyt 10 months ago
Labels: enhancement

#97 - Providing example data with species and site categories

Issue - State: open - Opened by Rekyt 10 months ago

#96 - Remove suggestion to raster and rgdal

Pull Request - State: closed - Opened by Rekyt 10 months ago - 1 comment

#95 - Order trait coverage labels in decreasing order

Pull Request - State: closed - Opened by Rekyt 10 months ago - 1 comment

#94 - Improve Rmd report template & function

Issue - State: open - Opened by ahasverus over 1 year ago - 3 comments
Labels: enhancement

#93 - Upscaling vignette

Pull Request - State: closed - Opened by ahasverus over 1 year ago - 1 comment

#92 - Review and complete introduction vignette

Pull Request - State: closed - Opened by Rekyt over 1 year ago - 1 comment

#91 - Wrong position of all_traits in fb_plot_site_traits_completeness()

Issue - State: closed - Opened by ahasverus over 1 year ago
Labels: bug

#90 - Review diagnostic plots vignette

Pull Request - State: closed - Opened by ahasverus over 1 year ago - 2 comments

#89 - Long vignette

Pull Request - State: closed - Opened by ahasverus over 1 year ago - 1 comment

#88 - Fix ggplot2 dependencies and various issues

Pull Request - State: closed - Opened by Rekyt over 1 year ago - 1 comment

#87 - New function fb_format_species_categories()

Issue - State: closed - Opened by ahasverus over 1 year ago
Labels: enhancement

#86 - Functions that still need to have species split categories

Issue - State: open - Opened by Rekyt over 1 year ago
Labels: enhancement

#85 - Better check the species x category object

Issue - State: open - Opened by ahasverus over 1 year ago
Labels: enhancement

#84 - Coverage functions do not work with a single species

Issue - State: closed - Opened by Rekyt over 1 year ago - 2 comments
Labels: bug

#83 - Clean environments of all the plots

Issue - State: closed - Opened by Rekyt over 1 year ago
Labels: bug, enhancement, plot

#82 - Implement species categories (fix #15)

Pull Request - State: closed - Opened by Rekyt over 1 year ago - 5 comments

#81 - Remove reliance on aes_q() in ggplot2 calls and implement tidy evaluation

Issue - State: closed - Opened by Rekyt over 1 year ago - 1 comment
Labels: enhancement

#80 - Bug when trait completeness matrix contains only one trait

Issue - State: closed - Opened by Rekyt over 1 year ago
Labels: bug

#79 - Bug in trait completeness matrix with non-continuous traits

Issue - State: closed - Opened by Rekyt over 1 year ago
Labels: bug

#78 - Try excluding given line from coverage test

Pull Request - State: closed - Opened by Rekyt almost 2 years ago - 1 comment

#77 - Compute Coverage for Trait Combinations (fix #75)

Pull Request - State: closed - Opened by Rekyt almost 2 years ago - 1 comment

#76 - Implement 'all_traits' argument to get all trait coverages

Pull Request - State: closed - Opened by Rekyt almost 2 years ago - 1 comment

#75 - A function to compute trait coverages (for species and sites) for all combinations

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: enhancement

#74 - Submit to CRAN \o/

Issue - State: open - Opened by Rekyt over 2 years ago

#73 - Better README (fix #71)

Pull Request - State: closed - Opened by Rekyt over 2 years ago

#72 - Update long-format documentation

Pull Request - State: closed - Opened by ahasverus over 2 years ago - 1 comment

#71 - Complete README

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: documentation, enhancement

#70 - Fix order of combinations in fb_plot_trait_combination_frequencies() when ordered by completeness

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: bug, plot

#69 - Fancier y-axis labels for fb_plot_number_traits_by_species()

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: enhancement, plot

#68 - Wrap trait names in plots

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: enhancement, plot

#67 - Add Diagnostic plots vignette (fix #47)

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 1 comment

#66 - Be explicit when computing coverage using all traits

Issue - State: closed - Opened by Rekyt over 2 years ago - 3 comments
Labels: documentation, enhancement

#65 - Remove color of edges of polygonal sites on maps because unreadable

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: bug, plot

#64 - Weird character in fb_plot_trait_combination_frequencies()

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: bug, plot

#63 - Re-check execution, length, and relevance of function examples from pkgdown website

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: bug, documentation

#62 - Add diagnostic plots for site x species table

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 1 comment

#61 - Rmd report template

Pull Request - State: closed - Opened by ahasverus over 2 years ago - 2 comments

#60 - Remove messages for NA values (#40)

Pull Request - State: closed - Opened by ahasverus over 2 years ago

#59 - Create site_locations with GDAL WKT (older version)

Pull Request - State: closed - Opened by ahasverus over 2 years ago - 1 comment

#58 - DOC: site and species must be the names of first columns of datasets

Issue - State: closed - Opened by ahasverus over 2 years ago
Labels: documentation

#57 - Implement diagnostic plots for site x species data

Issue - State: closed - Opened by ahasverus over 2 years ago
Labels: enhancement, plot

#56 - Fix missing checks (fix #50)

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 3 comments

#55 - Trying fixing Linux GHA

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 2 comments

#54 - Tests for site_locations object of different types: points, polygons, lines

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: bug

#53 - Potential issue with the type of site/species column

Issue - State: closed - Opened by ahasverus over 2 years ago - 2 comments
Labels: bug

#52 - Add new check function for threshold arguments

Issue - State: closed - Opened by ahasverus over 2 years ago
Labels: enhancement

#51 - Count and Filter site x species dataset

Pull Request - State: closed - Opened by ahasverus over 2 years ago - 1 comment

#50 - Remove check for missing datasets

Issue - State: closed - Opened by ahasverus over 2 years ago
Labels: enhancement

#49 - Update datasets

Pull Request - State: closed - Opened by ahasverus over 2 years ago

#48 - Complete introduction vignette

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: documentation

#47 - Add "diagnostic plots" vignette

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: documentation

#46 - Split sites into groups through additional column

Issue - State: open - Opened by Rekyt over 2 years ago
Labels: enhancement

#45 - Complete long-format vignette

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: documentation

#44 - Complete upscaling vignette

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: documentation

#43 - Plot idea: Correlation matrix between traits

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: enhancement, plot

#42 - Add better figure for missing data pattern on species x traits completeness

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment

#41 - Plot idea: add generic function to plot site data

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: enhancement, plot

#40 - Think about message when species have only NA traits

Issue - State: closed - Opened by Rekyt over 2 years ago - 5 comments
Labels: bug

#39 - Fix fb_cwm() with NA traits

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: bug

#38 - Rename function with typo and check spelling

Issue - State: closed - Opened by Rekyt over 2 years ago

#37 - Write a better and updated introduction vignette

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 3 comments
Labels: documentation

#36 - Better tests for plotting functions

Issue - State: open - Opened by Rekyt over 2 years ago
Labels: enhancement, plot

#35 - Make an automatic report with all the figures

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment
Labels: enhancement

#34 - Output a table with cover of traits

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: enhancement

#33 - Use ggplot2 properly when calling it

Issue - State: closed - Opened by Rekyt over 2 years ago

#32 - Add default map of site trait coverage

Pull Request - State: closed - Opened by Rekyt over 2 years ago

#31 - Move check for missing argument into check functions

Issue - State: closed - Opened by Rekyt over 2 years ago

#30 - Transform site_locations as an sf object (should fix #26)

Pull Request - State: closed - Opened by Rekyt over 2 years ago

#29 - Implement functions `fb_count_()` and `fb_filter_()` for species x traits df

Pull Request - State: closed - Opened by ahasverus over 2 years ago - 1 comment

#28 - fb_get_coverage() bugs

Issue - State: closed - Opened by Rekyt over 2 years ago
Labels: bug

#27 - Add nice default visualizations

Pull Request - State: closed - Opened by Rekyt over 2 years ago - 1 comment

#26 - Convert site_locations data as sf

Issue - State: closed - Opened by Rekyt over 2 years ago

#25 - Hex sticker improvements

Issue - State: closed - Opened by Rekyt over 2 years ago - 1 comment

#24 - Implement fully non-continuous traits

Pull Request - State: closed - Opened by Rekyt almost 3 years ago - 1 comment

#23 - Explicit site or species column

Pull Request - State: closed - Opened by Rekyt almost 3 years ago - 2 comments

#22 - Datasets

Pull Request - State: closed - Opened by ahasverus about 3 years ago - 1 comment

#21 - Site names as separate column or as row names

Issue - State: closed - Opened by Rekyt about 3 years ago

#20 - Transform site x locations object into 'sf'

Pull Request - State: closed - Opened by Rekyt about 3 years ago - 2 comments

#19 - Initial Priorities checklist

Issue - State: closed - Opened by Rekyt about 3 years ago - 1 comment

#18 - Should all functions that compute things output tidy?

Issue - State: closed - Opened by Rekyt about 3 years ago - 1 comment
Labels: question

#17 - Kevdev

Pull Request - State: closed - Opened by KevCaz about 3 years ago - 3 comments