FEniCS/dolfinx issues and pull requests

#3291 - Write and read mesh using ADIOS2

Pull Request - State: open - Opened by ampdes 5 months ago - 4 comments

#3290 - Merging in latest changes.

Pull Request - State: closed - Opened by adrianjhpc 5 months ago - 1 comment

#3289 - Remove workarounds following upstream updates for CI

Pull Request - State: closed - Opened by chrisrichardson 5 months ago

#3288 - [BUG]: Implicit use of previously created function space

Issue - State: closed - Opened by IgorBaratta 5 months ago - 1 comment
Labels: bug

#3287 - Dokken/subdomain form independent

Pull Request - State: closed - Opened by jorgensd 5 months ago

#3286 - [BUG]: Visualization of one dimensional data with ParaView

Issue - State: closed - Opened by schnellerhase 5 months ago - 6 comments
Labels: bug

#3285 - Export missing compile time constants to python

Pull Request - State: closed - Opened by schnellerhase 5 months ago

#3284 - Pyamg test Add xfail for now

Pull Request - State: closed - Opened by chrisrichardson 5 months ago - 1 comment

#3283 - Favor `exterior_facet_indices` over `locate_entities_boundary` for retrieving complete boundary

Pull Request - State: closed - Opened by schnellerhase 5 months ago - 10 comments

#3282 - Performance regression in collapsing blocked subspace

Issue - State: open - Opened by jorgensd 5 months ago - 11 comments
Labels: performance, high-priority

#3281 - Improve check for facet->cell connectivity

Pull Request - State: closed - Opened by chrisrichardson 5 months ago

#3280 - PETSc MG

Pull Request - State: closed - Opened by schnellerhase 5 months ago - 1 comment

#3279 - Bump docker/build-push-action from 5 to 6

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#3278 - using shared_ptr comparison for entity_maps keys

Issue - State: closed - Opened by jorgensd 5 months ago
Labels: bug, high-priority

#3277 - MacOS CI fixes

Pull Request - State: closed - Opened by chrisrichardson 5 months ago - 3 comments
Labels: housekeeping, ci

#3276 - Fix pyvista actions

Pull Request - State: closed - Opened by chrisrichardson 5 months ago
Labels: bug, housekeeping, ci

#3275 - Some updates for mesh generation

Pull Request - State: closed - Opened by schnellerhase 5 months ago - 2 comments

#3274 - Workaround for numpy 2.0 issue with pyamg

Pull Request - State: closed - Opened by chrisrichardson 5 months ago

#3273 - Define concept of `FunctionSpace` for mixed topology

Issue - State: open - Opened by chrisrichardson 5 months ago
Labels: proposal

#3272 - Allow `CoordinateElement` to be passed to built-in mesh generators

Issue - State: open - Opened by jpdean 5 months ago - 1 comment
Labels: enhancement

#3271 - Create mixed topology mesh

Pull Request - State: closed - Opened by chrisrichardson 5 months ago - 9 comments

#3270 - Pin nanobind version in Spack CI test

Pull Request - State: closed - Opened by garth-wells 5 months ago
Labels: ci

#3269 - [BUG]: cannot export several components of function with VTX

Issue - State: closed - Opened by RemDelaporteMathurin 5 months ago - 8 comments
Labels: bug

#3268 - Add more output to errors raised on PETSc lib import.

Pull Request - State: closed - Opened by jhale 5 months ago

#3267 - Improve error message

Pull Request - State: closed - Opened by garth-wells 5 months ago

#3266 - Remove `.mailmap`

Pull Request - State: closed - Opened by nate-sime 5 months ago
Labels: housekeeping

#3265 - Re-enable Windows build

Issue - State: closed - Opened by jhale 5 months ago - 1 comment

#3264 - Add indices of missing connectivity in error message

Pull Request - State: closed - Opened by garth-wells 5 months ago
Labels: enhancement

#3263 - Data independent form compilation for Python interface

Pull Request - State: closed - Opened by jorgensd 5 months ago - 3 comments
Labels: enhancement

#3262 - Mixed dimension assembly in C++ and form independence for subdomains

Pull Request - State: closed - Opened by jorgensd 5 months ago - 2 comments
Labels: enhancement, demo

#3261 - Prepare for release of numpy 2.0 by using ruff ruleset

Pull Request - State: closed - Opened by jorgensd 5 months ago
Labels: dependencies

#3260 - Use `enabled_coefficients` to restrict packing of coefficients

Pull Request - State: closed - Opened by jorgensd 5 months ago - 1 comment
Labels: bug, performance, high-priority

#3259 - Add ARM VTK to Docker Notebook image.

Pull Request - State: closed - Opened by jhale 5 months ago - 1 comment

#3258 - Update vcpkg

Pull Request - State: closed - Opened by jhale 6 months ago

#3257 - Allow specifying attribute name when reading meshtag

Pull Request - State: open - Opened by mleoni-pf 6 months ago
Labels: io

#3256 - [BUG]: Packing of codim-0 form not working for mixture of measures

Issue - State: closed - Opened by jorgensd 6 months ago - 2 comments
Labels: bug

#3255 - Update defines.h

Pull Request - State: closed - Opened by jhale 6 months ago

#3254 - Small Basix type updates

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: housekeeping

#3253 - Allow dx and dx(i) in same form

Pull Request - State: closed - Opened by jorgensd 6 months ago
Labels: bug

#3252 - [BUG]: #3215 introduced a regression: cannot have anymore `dx(1)` and `dx` in the same form

Issue - State: closed - Opened by francesco-ballarin 6 months ago
Labels: bug, high-priority

#3251 - Temporarily disable Windows CI - upstream issue.

Pull Request - State: closed - Opened by jhale 6 months ago - 1 comment

#3250 - Bump actions/cache from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#3249 - Bump docker/login-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#3248 - Bump actions/github-script from 6 to 7

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 2 comments
Labels: dependencies

#3247 - Bump actions/setup-python from 2 to 5

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#3246 - Make compile time options compile time constants

Pull Request - State: closed - Opened by schnellerhase 6 months ago - 12 comments
Labels: enhancement

#3245 - Add dependabot for github actions

Pull Request - State: closed - Opened by jorgensd 6 months ago - 1 comment
Labels: ci

#3244 - Enable SCOTCH detection via CMake `CONFIG` mode.

Pull Request - State: closed - Opened by garth-wells 6 months ago - 2 comments
Labels: build

#3243 - [BUG]: interpolation on CR space

Issue - State: open - Opened by cmaurini 6 months ago - 3 comments
Labels: bug

#3242 - demo test: default mpiexec to mpiexec

Pull Request - State: closed - Opened by minrk 6 months ago

#3241 - cmake: find scotch with cmake config first

Pull Request - State: closed - Opened by minrk 6 months ago - 2 comments

#3240 - Distribute fixed width data

Pull Request - State: closed - Opened by chrisrichardson 6 months ago - 1 comment

#3239 - Bump dependency versions in Dockerfile

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: housekeeping, docker

#3238 - Generate Python type stubs using nanobind (v2)

Issue - State: open - Opened by garth-wells 6 months ago
Labels: enhancement, good first issue, task, type-hints, nanobind

#3237 - Send multiple cell types to partitioner

Pull Request - State: closed - Opened by chrisrichardson 6 months ago

#3236 - Write mixed topology mesh to file

Issue - State: open - Opened by chrisrichardson 6 months ago
Labels: io

#3235 - Dockerfile end-user updates

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: docker

#3234 - Support mixed topology for dual graph

Pull Request - State: closed - Opened by chrisrichardson 6 months ago

#3233 - Add mixed topology functionality to mesh partitioning

Issue - State: closed - Opened by chrisrichardson 6 months ago - 1 comment
Labels: enhancement

#3232 - Docker simplify (phase 2)

Pull Request - State: closed - Opened by garth-wells 6 months ago - 6 comments
Labels: ci

#3231 - Read mixed topology mesh from file

Issue - State: open - Opened by chrisrichardson 6 months ago - 3 comments
Labels: enhancement, io

#3230 - Clean up Docker files (first step)

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: docker, ci

#3229 - Simplify Dockerfile packages

Pull Request - State: closed - Opened by garth-wells 6 months ago

#3228 - Doc fixes and Doxygen version update

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: documentation, housekeeping, ci

#3227 - Generalize all output formats for general length vectors and tensors

Pull Request - State: closed - Opened by jorgensd 6 months ago
Labels: bug, io, backport?

#3226 - Expose interpolation matrix for MatrixCSR (without PETSc)

Pull Request - State: closed - Opened by chrisrichardson 6 months ago

#3225 - Test needed for dof permutations on prism and pyramid cells

Issue - State: open - Opened by chrisrichardson 6 months ago
Labels: enhancement, testing

#3224 - Add support for mixed-domain problems of codimension 1

Pull Request - State: closed - Opened by jpdean 6 months ago - 1 comment
Labels: enhancement

#3223 - Permutation computation refactoring

Pull Request - State: closed - Opened by chrisrichardson 6 months ago - 2 comments

#3222 - Improve documentation for `pyamg` demo

Pull Request - State: closed - Opened by chrisrichardson 6 months ago
Labels: documentation

#3221 - Improvements and fixes for C++ Doxygen/breathe/sphinx doc processing

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: documentation, housekeeping

#3220 - Install unzip package in CI for Spack

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: ci

#3219 - Start cleanup of Python dependencies.

Pull Request - State: closed - Opened by jhale 6 months ago - 2 comments

#3218 - Remove spdlog install from CI yaml

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: ci

#3217 - Add `spdlog` to doc install requirements

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: documentation

#3216 - Switch to spdlog

Pull Request - State: closed - Opened by chrisrichardson 6 months ago - 7 comments

#3215 - Simplify integration domain packing

Pull Request - State: closed - Opened by jorgensd 6 months ago - 5 comments
Labels: backport?

#3214 - interior_facet_assembly causes deadlock if there are no interior facets on the process

Issue - State: closed - Opened by jorgensd 6 months ago - 2 comments
Labels: bug, high-priority, backport?

#3213 - `dolfinx.fem.Form.integral_types` nanobinding is incorrect.

Issue - State: closed - Opened by jorgensd 6 months ago
Labels: bug

#3212 - Remove Fides file output

Issue - State: open - Opened by garth-wells 6 months ago - 5 comments
Labels: question, proposal, io

#3211 - Use glog

Pull Request - State: closed - Opened by chrisrichardson 6 months ago - 2 comments

#3210 - Simplify oneAPI CI

Pull Request - State: closed - Opened by garth-wells 6 months ago

#3209 - Orient mesh entities consistently and generalise `entities_to_geometry`

Pull Request - State: closed - Opened by jpdean 6 months ago - 1 comment
Labels: enhancement

#3208 - [BUG]: `create_entity_permutations` occasionally segfaults for prism meshes

Issue - State: closed - Opened by jpdean 6 months ago - 3 comments
Labels: bug

#3207 - Support `dolfinx::fem::Expression` with co-dim 0 submeshes

Issue - State: open - Opened by jorgensd 6 months ago
Labels: enhancement

#3206 - Exit demos that require PETSc when PETSc is not available

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: demo, ci

#3205 - Simplify oneAPI and Rocky images

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: docker

#3204 - Fix RedHat tests

Pull Request - State: closed - Opened by jhale 6 months ago - 1 comment

#3203 - Spack Actions CI update

Pull Request - State: closed - Opened by garth-wells 6 months ago
Labels: ci

#3202 - Add pyamg demo

Pull Request - State: closed - Opened by chrisrichardson 6 months ago - 2 comments

#3201 - [BUG]: dolfin / dolfinx /fenics / fenicsx not in debian testing repositories.

Issue - State: closed - Opened by jmv2009 7 months ago - 4 comments
Labels: bug

#3200 - Support building on Windows

Issue - State: closed - Opened by garth-wells 7 months ago
Labels: enhancement, build, in progress

#3199 - Bump Python version in complex kernel to 3.12

Pull Request - State: closed - Opened by jorgensd 7 months ago - 2 comments

#3198 - Port DOLFINx to Windows

Pull Request - State: closed - Opened by jhale 7 months ago - 23 comments

#3197 - Add petsc4py build requirements

Pull Request - State: closed - Opened by garth-wells 7 months ago
Labels: docker

#3196 - Add break system packages

Pull Request - State: closed - Opened by jhale 7 months ago

#3195 - Change C++ logging library to `spdlog` or `glog`

Issue - State: closed - Opened by garth-wells 7 months ago - 6 comments
Labels: discussion

#3194 - Spack ci update

Pull Request - State: closed - Opened by garth-wells 7 months ago
Labels: ci

#3193 - Fix patch level for HDF in Dockerfile

Pull Request - State: closed - Opened by garth-wells 7 months ago
Labels: docker, ci

#3192 - Update Docker base images to `ubuntu:24.04`

Pull Request - State: closed - Opened by garth-wells 7 months ago
Labels: docker

GitHub / FEniCS/dolfinx issues and pull requests